Information report for CICLE_v10018944mg
Gene Details
|
|
Functional Annotation
- RNA binding protein which cotranscriptional splicing of a key floral repressor gene FLOWERING LOCUS C (FLC), , facilitates R-loop formation near FLC intron I to repress its transcription, thereby promoting the floral transition. inhibition of cotranscriptional splicing of FLC by nuclear HRLP condensates constitutes the molecular basis for down-regulation of FLC transcript levels.
Homologous
- Actinidia chinensis: CEY00_Acc16140
- Citrullus lanatus: Cla97C05G083680
- Gossypium hirsutum: Gohir.A11G074700, Gohir.D11G079300, Gohir.D11G079400, Gohir.A11G074600
- Juglans regia: Jr14_02920, Jr05_02460, Jr05_02450
- Manihot esculenta: MANES_05G056900
- Populus trichocarpa: POPTR_014G051500v3
- Prunus avium: Pav_sc0002465.1_g050.1.mk
- Prunus persica: PRUPE_2G120600
- Rosa chinensis: RchiOBHm_Chr1g0345261
- Sesamum indicum: SIN_1009863
- Vitis vinifera: VIT_15s0021g01160
Gene Resources
- Pfam: PF00076 PF08777 PF11608 PF13893
- UniProt: V4VYY3
- EMBL: KI536661
- AlphaFoldDB: V4VYY3
- KEGG: cic:CICLE_v10018944mg
- OMA: SEMRRPY
- InterPro: IPR000504 , IPR012677 , IPR035979
- PANTHER: PTHR21245
- SUPFAM: SSF54928
- PROSITE: PS50102
- Gene3D: 3.30.70.330
- OrthoDB: V4VYY3
- CDD: cd00590
- eggNOG: ENOG502QRDT
- STRING: 85681.V4VYY3
Sequences
CDS Sequence
- >CICLE_v10018944mg
ATGCCACCGCGAACAGTAAAACGAGGAGCAGCGGGGCCGAGGAGGACGGCGAGAGCTACGAGAGGGACGGCGAAGCAGCAGGCAGAGGTCGCGGAAGAGACAGTTAAAGTAGAAGAGGTTCCGGTGAAGGAAGAAGAAAAGGCGGTTGTTGAGGATGATAATAAGCCAGTTGTTGTTGAAGATGAACCGAAATCCGATGTCAATGGCTCGGTTCCTGCGACGCAAAAAGAAGATGAGGTAAAGGAGTCTGTAGATGAGTATGAAAAGGATGAGCGGTTAGACCTGGATGATAATGAACCTGAATACGAACCTGAAGAATATGGAGGGGTGGATTATGATGACAAGGAAACAGAACATGAGGATGTTCAGGAAGTAGGGAATGAAGAGGATGAACATGATGATGAGAATGTTGGTGAGGAAGAAGAGGATGATTTAGCTGAGGGAGAAATGGAAGATGTTCCTGAGGAACATGGACAAGGTGAAGAGGAAGTTGAGAATGCTGGTGAGGAAGCAGAGCGTCCAGAGATGGTTGATGCAGAGGAACATGATCATCATGAAATGTTTCAGGAGAGGCGCAAACGTAAGGAGTTTGAAGTTTTCGTTGGTGGTTTGGATAAGGATGTCGTTGGGGATGATCTGAGGAAAGTTTTTAGTCAAGTTGGTGAGGTCACAGAAGTCAGGTTGATGATGAACCCACAGACAAAGAAGAATAAGGGGTTTGCATTCCTGCGTTTTGCAACTGTGGAACAAGCAAGACAAGCTGTTACAGAGCTCAAAAATCCTGTGATCAATGGCAAACAATGTGGTGTTACTCCTAGTCAAGATAGCGACACTCTTTTTCTGGGTAACATTTGTAAGACATGGACAAAAGAAGCTTTGAAAGAGAAACTGAAACATTATGGAGTTGACAATGTTGAAGATTTGACTTTGGTAGAAGATAGTAACAACGAGGGAATGAATCGAGGATTTGCCTTTTTAGAATTCTCATCTCGTTCAGATGCCATGGATGCTTTTAAGCGTCTTCAGAAGAGAGATGTGTTGTTTGGTGTTGATAGACCAGCAAAGGTTTCTTTTGCTGATTCCTTCATTGACCCGGGCGATGAAATTATGGCTCAGGTTAAAACTGTATTTGTTGATGGTCTGCCTGCTTCATGGGATGAAGATCGTGTCCGCGAACTTCTAAAGAATTATGGGGAGATCACTAAGATTGAGCTTGCCCGAAATATGCCATCTGCCAAGAGGAAGGACTTTGGATTTGTAACATTCGATACTCATGATGCTGCTGTCACATGTGCTAAAAGCATCAACAATGCTGAGTTGGGTGAAGGGGACAACAAGGCTAAAGTTAGGGCCAGGTTGTCAAGACCACTTCAGAGAGGTAAAGGCAAACATGCTAGTCGTGGTGATTTCCGGTCGGGACGTGGGACTGGACGGGCAACAAGGGGCTCATGGGGTCTTCCATCACCACGTAGCTTACCAGGACGTAGTGCAAGGGGGATTGGAAGTCGTCTCCCTCCAGCTAGTGTGAAGAGGCCTGTTCCTGTGAGAGATAGACGTCCTATTATGTCGATGACAGCAAGAGCTAGGCCTATGCCCCCACCTCCACCTAGATCCTATGATAGAAGAGCGCCTGTTCCTTCTTACCCAAAGCCTGGCTTAAAGAGAGAATATGGTCGCCGAGATGAGGTTCCTCCTCCACGAAGTAGAGCTCCAGTAGATTATGGTTCAAGGGTTGTTCCTGATAGACGCCCTTATAGAGATGAGTATACATCCCGTGGCTCTGGCTATCCTGACATGCCAAGAAGTACTTCTCGCGGTGCAGCAAGGAGACCTTATGTAGATGATGGCTATGCTCAAAGGTTTGAGAGGCCGCCTCCAAGTTACCGTGAAGGGCGCGCCCGTGATTATGAGACTGTGTCTGGGTCAAAACGTCCTTATTCTGTTGTGGATGATGTTCCGCCTCGTTACGCTGATCCTGGTGTTCGCCACTCAAGGGCTCGTCTGGACTATGACCTCGGTGGAGGTGCTCCTCAATATGGGGATGCATATGGTGATAGAATGGGGAGATCTAATCTAGGATATGGTGGCAGCAGAAGCTCAATCTCCAGTCAGGATTCTCACGGACTTTATAGCAGTCGTCAGGGCATGGGCTATGGAGGTGGTTCATATAGTGGCGGTGATGTTGGTGGAATGTACTCTTCCAGTTATGGTAGTGATTATATGCCTCGTGGATCTGATGTTGGTGGTAGCTCTTACTCATCAATGTATCCTGGTCGTGGTGTGGGAGGCAGCAGTTACATGGGTAGTGGTGGTTCTGGATCATACTACTGA
Protein Sequence
- >CICLE_v10018944mg
MPPRTVKRGAAGPRRTARATRGTAKQQAEVAEETVKVEEVPVKEEEKAVVEDDNKPVVVEDEPKSDVNGSVPATQKEDEVKESVDEYEKDERLDLDDNEPEYEPEEYGGVDYDDKETEHEDVQEVGNEEDEHDDENVGEEEEDDLAEGEMEDVPEEHGQGEEEVENAGEEAERPEMVDAEEHDHHEMFQERRKRKEFEVFVGGLDKDVVGDDLRKVFSQVGEVTEVRLMMNPQTKKNKGFAFLRFATVEQARQAVTELKNPVINGKQCGVTPSQDSDTLFLGNICKTWTKEALKEKLKHYGVDNVEDLTLVEDSNNEGMNRGFAFLEFSSRSDAMDAFKRLQKRDVLFGVDRPAKVSFADSFIDPGDEIMAQVKTVFVDGLPASWDEDRVRELLKNYGEITKIELARNMPSAKRKDFGFVTFDTHDAAVTCAKSINNAELGEGDNKAKVRARLSRPLQRGKGKHASRGDFRSGRGTGRATRGSWGLPSPRSLPGRSARGIGSRLPPASVKRPVPVRDRRPIMSMTARARPMPPPPPRSYDRRAPVPSYPKPGLKREYGRRDEVPPPRSRAPVDYGSRVVPDRRPYRDEYTSRGSGYPDMPRSTSRGAARRPYVDDGYAQRFERPPPSYREGRARDYETVSGSKRPYSVVDDVPPRYADPGVRHSRARLDYDLGGGAPQYGDAYGDRMGRSNLGYGGSRSSISSQDSHGLYSSRQGMGYGGGSYSGGDVGGMYSSSYGSDYMPRGSDVGGSSYSSMYPGRGVGGSSYMGSGGSGSYY