Information report for CICLE_v10011123mg
Gene Details
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Functional Annotation
- Encodes a homolog of the mammalian protein CstF77, a polyadenylation factor subunit. RNA 3′end鈥損rocessing factor of antisense FLC transcript. Mediates silencing of the floral repressor gene FLC.
Homologous
- Beta vulgaris: BVRB_5g112490
- Citrullus lanatus: Cla97C04G071390
- Glycine max: Glyma.19G064500
- Gossypium hirsutum: Gohir.A06G170700, Gohir.D06G178500
- Juglans regia: Jr15_00760, Jr15_00750, Jr15_00770
- Medicago truncatula: Medtr6g026900
- Nicotiana attenuata: A4A49_35752
- Populus trichocarpa: POPTR_003G106200v3
- Prunus persica: PRUPE_1G353000
- Rosa chinensis: RchiOBHm_Chr7g0218051
- Solanum lycopersicum: Solyc10g050540.2
- Vitis vinifera: VIT_11s0065g00710
Gene Resources
- Pfam: PF05843
- UniProt: V4SV92
- EMBL: KI536861
- AlphaFoldDB: V4SV92
- KEGG: cic:CICLE_v10011123mg
- OMA: CFRGPFV
- InterPro: IPR003107 , IPR008847 , IPR011990 , IPR019734 , IPR045243
- PANTHER: PTHR19980 , PTHR19980:SF0
- SUPFAM: SSF48452
- PROSITE: PS50005
- Gene3D: 1.25.40.1040
- OrthoDB: V4SV92
- eggNOG: KOG1914
- STRING: 85681.V4SV92
Sequences
CDS Sequence
- >CICLE_v10011123mg
ATGGCATCATCATCGGTCGAGCCTGAATCAGAGGAAAATATAACTGGCGTAGCTGATAAATACAATGTCGAAACTGCAGAAATTCTTGCCAACAGTGCACTGCATTTGCCTGTTGCACAGGCGGCGCCTATATATGAGCAACTTCTTTCTGTGTTTCCCACAGCTGCTAAATTTTGGAAGCAGTATGTGGAGGCTTACATGGCTGTAAATAATGATGATGCTACTAAGCAGTTATTTAGCCGATGTTTGTTGATCTGCCTTCAAGTCCCTCTTTGGAGATGCTACATTCGATTTATCAGGAAAGTCTACGAGAAGAAGGGCACAGAGGGCCAGGAAGAGACAAGGAAAGCTTTTGATTTTATGCTTAGCCATGTTGGATCGGATATATCATCTGGGCCTATTTGGTTGGAATACATCACCTTTTTAAAGTCATTGCCAGCTCTAAACGCTCAGGAGGAATCACAACGGATGATTGCTATTCGGAAAGCATACCAAAGGGCTGTTGTTACTCCCACCCATCATGTAGAGCAACTCTGGAAGGATTATGAAAATTTTGAAAATTCTGTTAGCCGTCAACTGGCTAAAGGGCTTTTGTCTGAATATCAATCAAAATACACCAGTGCAAGGGCTGTATATCGGGAGCGAAAGAAATATTGTGAGGAAATTGATTGGAATATGCTTGCAGTGCCACCAACTGGATCTTACAAAGAAGAACAGCAGTGGATTGCATGGAAGAGGCTCTTAACCTTTGAAAAGGGAAACCCTCAACGGATAGACACTGCATCGTCCAACAAAAGAATCATATTCACCTATGAGCAGTGTCTGATGTATCTATACCATTACCCGGATATATGGTATGACTATGCTACTTGGCATGCAAAAAGTGGCTCAATAGATGCTGCAATCAAAGTATTTCAACGAGCTTTGAAGGCTCTTCCAGATTCAGAAATGCTAAGGTATGCTTTTGCAGAGCTAGAGGAATCCCGTGGAGCAATTGCGGCTGCAAAGAAATTATATGAAAGTCTTTTGACCGACAGCGTTAATACAACAGCTCTGGCACATATACAATTTATTCGTTTTCTACGAAGGACTGAGGGAGTTGAAGCAGCTCGCAAGTACTTCCTTGATGCTCGTAAATCCCCAAACTTCACATACCATGTATATGTTGCTTACGCCCTGATGGCCTTCTGTCAAGACAAAGACCCAAAGCTTGCTCACAATGTTTTTGAAGCAGGATTGAAACGTTTTATGCATGAGCCTGCATACATACTTGAATATGCAGATTTTTTGTCTCGTCTGAATGATGATAGAAACATTCGGGCTTTGTTTGAGAGGGCGTTAAGCTCTCTACCACCTGAGGAATCCATTGAGGTATGGAAAAGGTTCACCCAATTTGAGCAAATGTATGGAGATTTGGATAGCACGCTGAAGGTTGAACAAAGAAGGAAAGAAGCTCTTTCTAGAACTGGTGAAGAAGGAGCATCTGCACTAGAGGATTCATTGCAAGATGTTGTGTCCCGTTATAGTTTCATGGATCTTTGGCCCTGCTCCTCTAAGGACCTGGATCATTTGGTCCGACAAGAGTGGCTTGTCAAAAACATCAACAAGAAAGTTGATAAATCAGCTCTCTCTAATGGACCTGGGATTGTAGATAAGGGTCCTTCTGGCCTGACAAGCAATTCAACTACATCTGCAACAGTCATATACCCAGATACATCTCAGATGGTTATTTATGATCCAAGGCAAAAACCTGGCATTGGAATTTCTCCTAGCACAACAGCAACTGGAGCCTCTTCTGCACTTAACGCCTTGTCTAATCCCATGGTTGCAACAGGGGGTGGTGGAATAATGAACCCGTTTGACGAGATGTTGAAAGCAGCATCACCTGCAATATTTGCATTTTTAGCAAACTTGCCTGCTGTGGAAGGTCCAACACCAAATGTGGATATCGTATTATCAATTTGTTTGCAGAGTGACATACCGACGGGACAGATGGGGAAATCACCGACGACTTACCCAACTCCAATACCAACAGGCGCTGCTCGTAGTGCAAGCGGCATTTCTGGGTCAAACAAATCGCATCCCACTCCTAGTGGTTCCTCTCTTAAACAATCAAAGGATAAGCAATCTTTAAAGAGAAAGGATATAGGGCAAGATGATGATGAAACCACAACTGTCCAGAGCCAGCCACAACCCCGGGATTTTTTTAGGATACGCCAGATGAAGAAAGCGCGAGGAGCTGCCAGTTCGCAGACAGGATCAGCATCGTATGGAAGTGCTGTTTCAGGAGATCTCTCTGGTAGCACAGGCTGA
Protein Sequence
- >CICLE_v10011123mg
MASSSVEPESEENITGVADKYNVETAEILANSALHLPVAQAAPIYEQLLSVFPTAAKFWKQYVEAYMAVNNDDATKQLFSRCLLICLQVPLWRCYIRFIRKVYEKKGTEGQEETRKAFDFMLSHVGSDISSGPIWLEYITFLKSLPALNAQEESQRMIAIRKAYQRAVVTPTHHVEQLWKDYENFENSVSRQLAKGLLSEYQSKYTSARAVYRERKKYCEEIDWNMLAVPPTGSYKEEQQWIAWKRLLTFEKGNPQRIDTASSNKRIIFTYEQCLMYLYHYPDIWYDYATWHAKSGSIDAAIKVFQRALKALPDSEMLRYAFAELEESRGAIAAAKKLYESLLTDSVNTTALAHIQFIRFLRRTEGVEAARKYFLDARKSPNFTYHVYVAYALMAFCQDKDPKLAHNVFEAGLKRFMHEPAYILEYADFLSRLNDDRNIRALFERALSSLPPEESIEVWKRFTQFEQMYGDLDSTLKVEQRRKEALSRTGEEGASALEDSLQDVVSRYSFMDLWPCSSKDLDHLVRQEWLVKNINKKVDKSALSNGPGIVDKGPSGLTSNSTTSATVIYPDTSQMVIYDPRQKPGIGISPSTTATGASSALNALSNPMVATGGGGIMNPFDEMLKAASPAIFAFLANLPAVEGPTPNVDIVLSICLQSDIPTGQMGKSPTTYPTPIPTGAARSASGISGSNKSHPTPSGSSLKQSKDKQSLKRKDIGQDDDETTTVQSQPQPRDFFRIRQMKKARGAASSQTGSASYGSAVSGDLSGSTG