Information report for CICLE_v10000325mg
Gene Details
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Functional Annotation
- Encodes a homolog of human Lysine-Specific Demethylase1. Involved in H3K4 methylation of target genes including the flowering time loci FLC and FWA. Located in nucleus. Negatively regulates root elongation. Involved in repression of LRP1 via histone deacetylation.
Homologous
- Actinidia chinensis: CEY00_Acc07494
- Glycine max: Glyma.09G185800
- Gossypium hirsutum: Gohir.D05G183500, Gohir.A05G180500
- Juglans regia: Jr11_19040
- Manihot esculenta: MANES_11G098200
- Populus trichocarpa: POPTR_002G013100v3
- Prunus avium: Pav_sc0000367.1_g050.1.mk
- Prunus persica: PRUPE_1G356300
- Rosa chinensis: RchiOBHm_Chr6g0304051
Gene Resources
- Pfam: PF01593 PF04433
- UniProt: V4V8Q5
- EMBL: KI536799
- AlphaFoldDB: V4V8Q5
- KEGG: cic:CICLE_v10000325mg
- OMA: SSRGEMF
- InterPro: IPR002937 , IPR007526 , IPR009057 , IPR036188 , IPR036388 , IPR050281
- PANTHER: PTHR10742 , PTHR10742:SF381
- SUPFAM: SSF46689 , SSF51905 , SSF54373
- PROSITE: PS50934
- Gene3D: 1.10.10.10 , 3.50.50.60 , 3.90.660.10
- OrthoDB: V4V8Q5
- eggNOG: KOG0029
- STRING: 85681.V4V8Q5
Sequences
CDS Sequence
- >CICLE_v10000325mg
ATGGAAACACCGCAAGAACCCTCCGATAACGCAAACGACGATGTCGTTTCCGACGAGTCTTCGCCGGAGACCGATGCAACGCTCTCTCCCAGTCAAATCGAAACCCAGGCGGAAACTGATGAGCTCCAGAACGCCACGGAAACAAATACTGCACTCGAGGCTCCCGTTTCGGACTCGCTAGACGACTCTTCTGATCCAATTCCAGAAGACCAACAGCCCCAAAACCCTAACCCTGCCGAGCCGGGCCCGCCCCCGAGGAAACGACGCCGTAGAAAGCGCTTCTTCACCGAAATCAACGGCAATCCATCCTTGGCGAGGAACCGACGCCCCAGATTCTCCTGCCTTGCTAAAGAAGTCGACACCGAAGCCCTAATTGCAATCTCAGTTGGTTTTCCAGTTGATTCACTTACTGAAGAAGAAATCGAAGCGAATGTAGTTTCCAAAATTGGAGGTACCGAGCAAGCTAATTACATTGTCGTGAGAAATCACATTCTATCACTCTGGAGATCGAATGTTTCTGTCTGGTTGACGCGTGAGCAGGCGCTCGAGTCAATTCGTTCCGAGCACAAAACCCTAGTTGACTCAGCGTATGATTTTTTACTAGAACATGGGTACATCAATTTCGGGCTAGCGCCGCCTATTAAAGAAGTGAAATTGGGGTCATTTGGTAGAGTGGAGAGGGGTAATGTGGTGATCGTAGGTGCTGGTCTTGCGGGGTTAGTTGCGGCGAGACAGTTGATTTCAATGGGGTTTAAAGTAGTCGTTTTGGAAGGCAGGGAACGTCCCGGTGGACGTGTCAAGACACGCAAGATGAAGTGTGATGGAGTGGTGGCTGCAGCTGATGTTGGTGGGAGCGTCCTCACTGGAATAAATGGGAACCCTCTTGGTGTTCTTGCTAGACAGTTAGAATTGCCACTTCATAAGGTGAGAGATATTTGTCCTTTGTATTTACCTAATGGTAAAGCAATTGATGCTGATATTGATTCTGGAGTAGAGGTATCGTTTAATAAATTGTTGGATAGAGTTTGCAAGCTTAGACATGATATGATTGAGGAATTTAAATCTGTAGATGTTCCATTAGGCGTTGCACTTGAAGCTTTTAGAAATGTTTATAAAGTTGCTGAGGATTTGCAAGAGAGAATGCTCTTGAATTGGCATTTAGCAAATTTGGAGTATGCAAATGCTTCCTTGATGTCTAATTTGTCAATGGCTTATTGGGATCAGGATGATCCATATGAGATGGGTGGTGATCATTGCTTTATTCCTGGAGGCAATGAACGGTTTGTTAGAGCACTTGCTGAGGATCTTCCAATATTTTATCAACGGACTGTGCAGAGTATTAGATACGGTGTTGATGGGGTTATGGTTTATGCTGGTGGGCAGGAGTTTCGCGGGGACATGGTTCTTTGTACAGTACCATTAGGTGTGCTTAAGAAGGGAACAATTGAGTTTGTACCTGAGCTTCCTCAGCGGAAGAAAGATGCAATTCAGAGATTAGGATATGGATTGCTTAATAAAGTTGCAATGTTGTTTCCACATAATTTTTGGGGTGGAGAGATTGATACATTTGGGCATTTGACAGAAGATTCAAGTATGAGAGGTGAGTTCTTTTTATTTTATAGCTATTCTTCTGTATCAGGAGGTCCACTTCTCGTGGCTCTTGTTGCTGGGGATGCTGCGATTAAGTTTGAGGAAATGTCACCGGTAGAGTCTGTGAATAAAGTATTAGAGATACTGAGAGGTATTTACCATCCAAAAGGAATTGTTGTTCCAGATCCAGTTCAGGCAATCTGTACTCGTTGGGGGAAGGATCGATTCTCATATGGGTCTTACTCTTATGTTGCCGTTGGTTCTTCGGGTGATGATTATGATATTCTTGCGGAGACTGTAGGGGATGGGAGAGTTTTCTTTGCAGGGGAAGCAACTAATAAACAATATCCGGCGACAATGCATGGAGCCTTTTTAAGTGGGATGAGAGAGGCTGCTAGCATACTTAGAGTGGCCAAAAGGAGGTCATTGGCTCTAACTAATAAAGCATATAATGAGAGTGAGGACAATGGTAATTTGGATAAGTTGTTTGAGACCCCTGACCTGACGTTTGGGAGCTTCTCTGCGTTGTTTGATCCAAAGTCTATTGATCTAGAATCTGATGCCTTGTTAAGGGTCAAATTCCAAGGTGAAAATTTTGATTCTGGTCATCTCTGTCTCTATGGTTTGGTAACAAGGAAGCAGGCCGTTCAGCTGCGTGAGTTAGATGGTGATGGTAACAGGATGAAAATGTTACATGATAACTTCAGGGTGAAGTTGGTTGCGAGGAGAGGTGTATGTAATGCTACGGAGTCTCTTATTACAAGAATTAAAGCAACTAGATTCAGCCTAAATGACGGGGTTTGA
Protein Sequence
- >CICLE_v10000325mg
METPQEPSDNANDDVVSDESSPETDATLSPSQIETQAETDELQNATETNTALEAPVSDSLDDSSDPIPEDQQPQNPNPAEPGPPPRKRRRRKRFFTEINGNPSLARNRRPRFSCLAKEVDTEALIAISVGFPVDSLTEEEIEANVVSKIGGTEQANYIVVRNHILSLWRSNVSVWLTREQALESIRSEHKTLVDSAYDFLLEHGYINFGLAPPIKEVKLGSFGRVERGNVVIVGAGLAGLVAARQLISMGFKVVVLEGRERPGGRVKTRKMKCDGVVAAADVGGSVLTGINGNPLGVLARQLELPLHKVRDICPLYLPNGKAIDADIDSGVEVSFNKLLDRVCKLRHDMIEEFKSVDVPLGVALEAFRNVYKVAEDLQERMLLNWHLANLEYANASLMSNLSMAYWDQDDPYEMGGDHCFIPGGNERFVRALAEDLPIFYQRTVQSIRYGVDGVMVYAGGQEFRGDMVLCTVPLGVLKKGTIEFVPELPQRKKDAIQRLGYGLLNKVAMLFPHNFWGGEIDTFGHLTEDSSMRGEFFLFYSYSSVSGGPLLVALVAGDAAIKFEEMSPVESVNKVLEILRGIYHPKGIVVPDPVQAICTRWGKDRFSYGSYSYVAVGSSGDDYDILAETVGDGRVFFAGEATNKQYPATMHGAFLSGMREAASILRVAKRRSLALTNKAYNESEDNGNLDKLFETPDLTFGSFSALFDPKSIDLESDALLRVKFQGENFDSGHLCLYGLVTRKQAVQLRELDGDGNRMKMLHDNFRVKLVARRGVCNATESLITRIKATRFSLNDGV