Information report for CEY00_Acc31652
Gene Details
|
|
Functional Annotation
- Encodes an auxin receptor that mediates auxin-regulated transcription. It contains leucine-rich repeats and an F-box and interacts with ASK1, ASK2 and AtCUL1 to form SCF-TIR1, an SCF ubiquitin ligase complex. Related to yeast Grr1p and human SKP2 proteins, involved in ubiquitin-mediated processes. Required for normal response to auxin and repressed in response to flagellin. As part of the SCF complex and in the presence of auxin, TIR1 interacts with Aux/IAA transcriptional repressor proteins and mediates their degradation. Mutations in TIR1 block auxin stimulation of flavonoid synthesis.
Homologous
- Arabidopsis thaliana — AT3G62980
Gene Resources
- Pfam: PF18511 PF18791
- UniProt: A0A2R6P5X2
- EMBL: NKQK01000028
- AlphaFoldDB: A0A2R6P5X2
- OMA: HVTITIC
- InterPro: IPR001810 , IPR032675 , IPR036047 , IPR041101 , IPR041567
- SUPFAM: SSF52047 , SSF81383
- Gene3D: 1.20.1280.50 , 3.80.10.10
- OrthoDB: A0A2R6P5X2
- CDD: cd22159
- STRING: 1590841.A0A2R6P5X2
Sequences
gDNA Sequence
- >CEY00_Acc31652
GGGGGCTGGGATAGAAACATTGGGAATAAGTCCTAGGTTCCTACATAGTAACACTATGATGGAGGATCTCTGTTTTATCAAGTGCTACCCGTTCAAATCACATTACATACAAAAAAGGACTCGGACTTGGAGTTCACAGATCCAAAAGATATAGGAAGGTAGTTTTTGGTTTCGGTGGAAGTGCTTGGAGAGTTAGGATGCAGCGAGTCCACAGGAAACATGTGTTTCTTTTGTCGTTGGATCAGAAGTTGCACCCATGGAGGAGCTAGTCGGCAGTAAACCAGATCGGGCTAGGGCAGCTTCGTCAACAATATTGTACTGAACCAAGAGATCCAAAAAATTCCATTTGAGATTCCGCCTAAGGCTCCATGGAGTATTGACTGCCCAGTCAATAGTTGAATTGGAATCCACAATACAAATCCTCTGTTCATAAAAAAGGAACAATATAAAAGGGCAGTCCCAAACTTAGAAAAGTTGATACTAGAAAATCATTTCCCTCCTAGGATTAGTATTGGGTCTAATGTTCTTTCTTACAGGACAATAAAAATGGAATCTGGGTCCAGCGGATAGGATATTCCAACTTCAATGGTGAAGTTGGGAAAATCTCATCATCTGTCAATAATGGAAGATTTGAATGACAAAGAGGGAAAATTGTTAGCTTTTTCGCGATAAGAAAAATGGGTGGCCTAACCCGTTAGGTGTTAATTTTGGGTGGCCTAACCCGTTAGGTGTTAATTTTCTTGTGCGACGGATCATGCTAATCTTCTTCGTATTGTTCCAATTTAATCGGATATCCCCAAAGCTAACAACTCATGTTAGAGCGTTGAAGATTGTTTAACCACTATTTTAACTATTTATAATCATTTAATAACACTCCTAATTGTGAAGCAAGGAAAATGAGAATTTTAGAAAAATGTTTTGAAATGTGACTAATAGGGGTCACCCTATGGTGATCACTAAGTACAGTTATAGTTGGCCATCTAATCCATATAAGTTAACATTAACTTGTGGACTTGTACAACGGCATATATTTGAACCCACACTCTACACATTACACACTAGGTATGGTTTGCCAAGGCATAAAAGATTCACCCTACCCAACCTTTGCACTGACCTAAATGACTAGTCCTTGGAAAGATTCGAATTAGGGACTTGAGGGATGAAATTCCAAATCTTTTTCGTTGAAAACCAACAACTCGGGTCTGAGAGAGATATTATAATGATAATCACAGTGATTTCAAAAACTAATGAGGTTTTCTCTGAATTTTTAACACCATATAGGCATCAAATATTCAAATAATTATGTCACTCATTTGTACAAATTCTTTTACCCAAGTGCATGAAACCCATATGTGAAAGTTTTTGTAAGAATATGTAAATAAATGTGTATGTCAGTATCTTTTCTCATATTCAAAGGAGTGAAGTTCACACAGTCGTCAGGTGGCGTAGAGAGGAGTGTGGCAAAAGTTGTGGGTATTGTGCAATCTCCCGGAATCTCTCACGTGGCACAACAGTCGATGCTTCTCTCTCTCTCTCTCTTCAAAGAGAGAAAAGAAGAAAGTACTTAAAAAACATTTCCTGACATCTATTAATTTCCACTGAGATATTCAAAGCTCTAGTTGCTGAAAAATCATTCAATAGGACCACTTGGCCACGCAAAATGTGTGAGATCTACAAGCAAATGTGCAATATGCACACAAATATATGAATTCAAGAACAGCTTTAACAGAGAAATCAGATTTCTACACCAAATATATGATTTGGTGATTTACATTGCAAGTTGAACTCAATTGGAACTAGTTCAAACAAATCCAGTTCGGAATAACCATTCAGAGCACGCAAATTTAAAATATATTATTCCAAACAACAAATGATAACAACACGAGTCCAGACGTGAAGGCAATAAATCTTTTACGCGCTACCAACGCTGATCAAATGCATAAATGTGCAAAAGCCTACACAAATAGCGTTCGCGGTGACTTTCCTGAACCAAATGACAACACTCTAGTCAATGTTGCAATTAACAGGTTTTAAACCTATTTATTAGTCACTAATAGCTATCAAACAGCTCAACCACTGTAAAATAGATGACTCATTCCACCTAGACTGGCATTGCAATTGTATTGAAGGTTCACTAAATTAATCGAACGAAAATGGGTAGCATATAGAGTTGTACCTGCTATATTACGACCCAAGGAATTTATCCATGGCAAGATCTATCGTCCATACAAAACCAGGCATGTCAAACCTTGGTCCTGAAACTGTCCGGTATATATATAGCTTCTCGACATGGCAGCTTTCAGGCCTTGAATCCGGGGGTCCCCTCTCATCAATAACTTCAACGTTAAGCCTAGGCATCTTCTGACCTAGCNAGGAATTGCATGTTTTCAAGTGATAGCTGTAACCAAACAAGCAGTGAAGAAAAATCTAAATATATTTTTAAAAAAAAAAAAAATTCTAAAAAAATAAGTAACTATTGTTGTCATTTGAAAGAGAAAGGACAATCCTTATCAAGAATAATTTTTCTATTTATTGGATATATTTTTTATTGCCATTTTTCACACAGACAGTTTACATCCCACCTAAAAATACATTTTTACAACATGAAACAACATAAAGACACCAAAAACTCAATTCAAAGGATCTTCAAGAAACCACTAAATAAAGCATTAAATCCTCAACAAACAACAAAGAAATCCATCCATCTTTCCTTAATAACGTAACGTAAGGAGAAACGAATCTTACATGAAATCAAAAACTCCCACATTTTACAAGAGACAAAAACTCAAATTCTGGAAACAATTCTAATCTGCAATAACCCTAAAAAAACACAGAAGATGAAAGTAAAGGCAATTCACACAATCTAGATTAGATTCTCACAGTTTCAATTTTCATGAAAGGATTTCGAAGATCTATCAGGGGGAAAAAAAGGGAAAGCCAACTTAAAGAAGGCAAAACCCTTCAGACTGCATATTCTTCATTTACAAACCAAGAAATCAAAAACTTAGGGTAGAAAAAACAAACGTGCTCTCAGAAAATAAACTATAGTGGGGGTCGGGGGGGAACCCAAACAAAAGCAAGAAAAGATAAGGCAACGCCGTTCAGATCCATATTTGGCTGAATTCGGACTACCTGAATTATAAGATCCACAAAAAAATTCGCAGAAAAACGAGGGAGATGCCCAGAAGAATAACCAAGAACGTAGCATTTCAGAACTCTTTTCACATTGAATACTTCAGCCATTATCAAAACAAGGTTTAGCTTCAGCACCCTCAATACAGATAGAAACACAGCTTTGAATCTTAAATATTTCATCTGAAAGAATCCAGTAGCTCACATCTCCACTCAAGCTCAACTAACTACTTATCAAGAAACAACAGAAAAATATGAACATACGGAGTAGTTTCAAACTTCGCTAACTCTCATTGCCTAAATTTATTAGCAAGAAAGGAAGATATCAAAGATGCAGTAATTGCAGGGAATCCGAGAAATAGGCAGCATTGACAGCTAGTTAAGTTTCAAACAGGAAACTCAAATTTCAATCCCTATTCCTCACTTTCCACAAGTATGGACAAATTTACTCCGATTCAGAATTAAACTTTCTCCACTTCAACCCGGCAACCAAACAGATTTTACGCGGAAAACAGGGAAGTATGAAAAGGGGGGGCGGCTGGTTCATCAGCATTTTAACTTTATTTGCTAGTGAAGATCCACTATTCCGAACTTTCCCAAGTTTAACCAAATCAACGAGCCCCAAAGGAAAAAATAACATCAAACTCAAAACTTCTACTTTCTCTATTTGAAATTTCCCAAATTTTCACAGCAACAGTACAGATTTGTGAAAAATAAAGAAAGCTCACTTGCAATTGGCGGCAATGGCAGCGAGTCCATCAGTAGTGAACCCCTCGCACGAGGCCATGACAAGGACCTTGAAGTTCCTGAACGAGCGAGCGACCAATTCCAAGGTCTCGTCAGTGACGACCATGCGCTTGAGCCGAATCTCCTCGAGACAAGGGTAAGCCCTAGTCATGGCCGCGATCCAGGGGTACACGTGACCTCCCCAGCCCTCCGGCACCAGATTATAATCCGCGAAGTGTGGCTTCCCCTTCAGCTCCACGGATCGCAACTCTGGGAACCGCCGGATCACGATCCTAGGGCTCACGGCGTAGCAGTTGCCGACGAAGATCCGCCTCCGGCACCACCGTTCGATCTCGAACCACGACTTGCACACCAGCGACACCGCGTTTCGATCCTTGTTGTAGTTTATGAACGAGAACACGTACTCCAGCACCTCCTCCGGAAACGAGTACGCCATTTCCGATTTGCTCAGATCAGAACGAAATATTCAGGTCCTCGAAGCTCGGAGGTCACTCGAAACAGCGAGTTCGAACGGTCTTTCGTGGGATCAGATCTTAGATGCCATTAACGAGCTCGGATAAAAGTCGCAGAAGAGAGAGAAAGTGAAGAGAGATAGAAGGGGGTGGAGGACGTGGTGAGCAAT
CDS Sequence
- >CEY00_Acc31652
ATGGCGTACTCGTTTCCGGAGGAGGTGCTGGAGTACGTGTTCTCGTTCATAAACTACAACAAGGATCGAAACGCGGTGTCGCTGGTGTGCAAGTCGTGGTTCGAGATCGAACGGTGGTGCCGGAGGCGGATCTTCGTCGGCAACTGCTACGCCGTGAGCCCTAGGATCGTGATCCGGCGGTTCCCAGAGTTGCGATCCGTGGAGCTGAAGGGGAAGCCACACTTCGCGGATTATAATCTGGTGCCGGAGGGCTGGGGAGGTCACGTGTACCCCTGGATCGCGGCCATGACTAGGGCTTACCCTTGTCTCGAGGAGATTCGGCTCAAGCGCATGGTCGTCACTGACGAGACCTTGGAATTGGTCGCTCGCTCGTTCAGGAACTTCAAGGTCCTTGTCATGGCCTCGTGCGAGGGGTTCACTACTGATGGACTCGCTGCCATTGCCGCCAATTGCAAGTGA
Protein Sequence
- >CEY00_Acc31652
MAYSFPEEVLEYVFSFINYNKDRNAVSLVCKSWFEIERWCRRRIFVGNCYAVSPRIVIRRFPELRSVELKGKPHFADYNLVPEGWGGHVYPWIAAMTRAYPCLEEIRLKRMVVTDETLELVARSFRNFKVLVMASCEGFTTDGLAAIAANCK