Information report for CEY00_Acc27811
Gene Details
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Functional Annotation
- Encodes a novel nuclear 111 amino-acid phytochrome-regulated component of a negative feedback loop involving the circadian clock central oscillator components CCA1 and LHY. ELF4 is necessary for light-induced expression of both CCA1 and LHY, and conversely, CCA1 and LHY act negatively on light-induced ELF4 expression. ELF4 promotes clock accuracy and is required for sustained rhythms in the absence of daily light/dark cycles. It is involved in the phyB-mediated constant red light induced seedling de-etiolation process and may function to coregulate the expression of a subset of phyB-regulated genes.
Homologous
- Capsicum annuum: T459_31810
- Cucumis melo: MELO3C025191
- Gossypium hirsutum: Gohir.D10G248000, Gohir.A10G236200, Gohir.A06G163700, Gohir.A10G236100, Gohir.D06G169600
- Juglans regia: Jr07_37880
- Lactuca sativa: gene-LSAT_8X12161
- Nicotiana attenuata: A4A49_20510
- Populus trichocarpa: POPTR_008G068200v3
- Sesamum indicum: SIN_1008734
- Solanum lycopersicum: Solyc06g051660.1
- Solanum tuberosum: PGSC0003DMG400039436
- Vitis vinifera: VIT_13s0067g00860
Gene Resources
- Pfam: PF07011
- UniProt: A0A2R6PLI3
- EMBL: NKQK01000024
- AlphaFoldDB: A0A2R6PLI3
- OMA: HAFPDEY
- InterPro: IPR009741 , IPR040462
- PANTHER: PTHR33469 , PTHR33469:SF5
- OrthoDB: A0A2R6PLI3
- STRING: 1590841.A0A2R6PLI3
Sequences
gDNA Sequence
- >CEY00_Acc27811
CATATCCAACACAACATGTCTGATCAAAGTAGATGGAAATAGAATTACACCTGCATCTGACATGGACGACAACGCCTCCATTGGTCGCAACACTGCCGCCGCCGCCGCCACCACGACCACCACGACCACGACCACCACGACCACCACGGTGAGCATCGCCACCACCAACCGCCGCTTCCGCGCCGCCGCTTTCGATCCCAACGACTCCGGCGAACACGAAGCCGACGAAGACACGGAGGCCTTCTCCGGCGAGGTGTGGGGCACCTTCGCCGACAACTTCCGGCAGGTTCAGTCGGTTCTGGATCGGAATCGTGTTTTGATTCAGCAGGTGAACGAGAACCACCAGTCGAAGATTCACGACAATATGGTCAGGAACGTAGCCCTAATTCAGGAGATTAACGGGAACATATCGAAGATCGTCTCTCTCTACTCCGATCTCTCGGCTAATTTCTCCAGTATGTTTCATCAGCAAAACGAAGCGGTTGATGCGAAAAGCAATAGCAGCGAGGGGACTTGAATTGAGTAAATCGGTTTCAAGTCAATGGTTTGTGTGTTTTTAATTGTGCACTCTATCTGTTTGAATAAATGTTAGTGTGTGAATTGTTCTTATAGAATGACTATTAATGGTTCTCTTTGATGTTTGGGTGGACTATGGTGGTTATGAATTATGATAGAACTCTGTTGTGATGCTTATGAGCTCTGTTTTTTATGCTTTTGTGATTTATAAGGAGGATGACTGCGGAATAGGACATCTTCCTCTTCAACTTGTTGGCTTAATAAGGTATTTATTCTCTGTTCGTTCATTGTCTTGCCTTTTTTTTTAAAAAAAATCTTGTGCACATATTGATCTGGGATGTTGAAGTTGGATTTATGTTTAGATAACATGAAAATAAAATGATCTAGAAGGAATTGCTCAAGGAAAGAAAACGAGGCTTGTTTCTCTGAATAACCCTAGCTGAAAATCCATAGGGTATTGGTTTCTGTTTGCTGAATTCATTGCTAGATTGGCGAGTCTTGTGGTGGATTTTGCCCATATCATGGAAACTTTGATAGAAAGAGAGGCCAGCGGAGTGCACTAGTGTAGACTAGTAGTCAATGTATAGAGTTCATCAAGAAGATCGATCTAGTGAAAAAGACATGAGAAGTTGTGCATAAATGTGTCAATTAAGTACCTTTCAAGTTTCAACATTGCAGCTCTGAGTTTTTGTTCTTTGGAGATTTTTGTAACTGATGCTTACACAATTTCTATTATATGAACCTTTTCAGTCTGTCCTGCTCAGTTCATTGCTAAAAACCGATACGAGAAAGATCACCTCATTCTAGTGATTTAGTAAATGTAGTGCTCTACTTTTGTCATGGGCACTGCAAGTTTGTGTATTGGTTGCCATGCTGTGTTGCACTTAGATTAAAAAAACTCCAAAGAAATTTCCATAATGGTGCGACTAGGTGCAATACGATTCCCCATTTGGTTATTCCTTTGACAATTAAAAAATGCCTTTGTTAAACCCATTTTGATACGAAACAAGAGGGTGATGATTTCTCGCTTTCAAAATGCTGGTCCTTGAGAGATATGTTGCTCCTGCAATAAAACCTTATCTGATACAATCCTGAGAGTACTCACTGCTTTATCGGCCTCTAATGTTTGTATAGACAAACAAGACACTGTTCTATAGATTCCCTCACCAATGCTACTATGATGACTACCATTAAATTGGCGAATATGAAGTTGGGTAAAAGAAGAGAATAAAGGCAAGGAAGCTAAGGAAAGGGGATGTTAGCCCTGGAATGTATTCAGAAGCGTTTGACAAGTTTTAGACTTGCATCATAGTCGGTGAAGATATCTGACTTAGTTAGAATATCAATGAATAGAACTTTAAGTCTTGCGTTCCTTGGATAGTTATTTTAATTTCGAAGTATTTTCCTTCAAATATCATGAAGCAACCAACTCCTTCTAATGATGCCAAATGGATAGGTCTATCTCTAATCTGACCCTCCCAGCACCCTGATTAAGGGAGAGACACTCTGGGTAATGTCTTTTACGTGTGACACTATTGCAAGAAAAAAAGCAAGGGAGAGCATATGGAGGCTTTAGGTGGTTAGTTTCTACTTACAATCTCCTCAATGCCGTCTGAGTTGATGTTATATATTTGACTGGTTATTCAGTTGTTGGTTTTACTGCCTGACCTTAACTATTGTCTGGTGGTTTCTCATTAATGCTGAAAATTGCTCTTGTCGCTGTTGGTTTTCGGCTCCTAGTTCCTAATGTTGTTGGTGACAAAGAATGCTCATCTGTTGTCGGTTTTGTTTTGTGAGGACAGTGACAGCTGGAAAGAGATTATCTTTTGTACTTGTACACCACATGAGGTACTTACATTTTGTCTGCCTTTTCTTCTTGCCTATGCTCTTATTCTGAATGACTTCATCAGTTCTAAAGCTGGTGGTTTCAAGTGAGATAACTGATATCAAAGTAACTACAAACTACAAACTGCTAAAAGAAGTAAGGGTTGAAGTTGTTGCTTCAAAGAGCATTTTTTTGATAACTCGGTATCAGTCTCAAAGGACCGACCAATCCAGAATCCAGGGGACCAATCCCATTGTCCACTAGTGGGGCCCCCAATTAAAGCTGGGGCAGAGTCCTGTATGGACTGGCCCCAAGAATTGCTAGCAAGGACATTTGAACCTGCGACCTTGAGGGGCAAGCCCCTTAAATAGTTTTTTGTTTTTACTCTCTTTGGTATGAGATCTTGTTTGTTTTAGGTGAGTTCATTGAAACGGATTTACGTATCCGAGTCATGTAGTTCTGGGATCAACGTGTGTCTGTGTTGTCCCAGTAGTATACCGAAAAGGTTAGGCATGGTTGTTTGAAACTAAAGTGAAGTATCTGCAGATGGTTGACAACTGCTGCTATGGCAAAGGATTTATATTTCAGAATCAAGGAGGCTTTGGGATCAATGGCTCTATGAGTTGTATCAGCTGTATAGTGAATCCTTGTTTGGTTTGGGAT
CDS Sequence
- >CEY00_Acc27811
ATGGACGACAACGCCTCCATTGGTCGCAACACTGCCGCCGCCGCCGCCACCACGACCACCACGACCACGACCACCACGACCACCACGGTGAGCATCGCCACCACCAACCGCCGCTTCCGCGCCGCCGCTTTCGATCCCAACGACTCCGGCGAACACGAAGCCGACGAAGACACGGAGGCCTTCTCCGGCGAGGTGTGGGGCACCTTCGCCGACAACTTCCGGCAGGTTCAGTCGGTTCTGGATCGGAATCGTGTTTTGATTCAGCAGGTGAACGAGAACCACCAGTCGAAGATTCACGACAATATGGTCAGGAACGTAGCCCTAATTCAGGAGATTAACGGGAACATATCGAAGATCGTCTCTCTCTACTCCGATCTCTCGGCTAATTTCTCCAGTATGTTTCATCAGCAAAACGAAGCGGTTGATGCGAAAAGCAATAGCAGCGAGGGGACTTGA
Protein Sequence
- >CEY00_Acc27811
MDDNASIGRNTAAAAATTTTTTTTTTTTTVSIATTNRRFRAAAFDPNDSGEHEADEDTEAFSGEVWGTFADNFRQVQSVLDRNRVLIQQVNENHQSKIHDNMVRNVALIQEINGNISKIVSLYSDLSANFSSMFHQQNEAVDAKSNSSEGT