Information report for CEY00_Acc23133
Gene Details
|
|
Functional Annotation
- Encodes the Arabidopsis INO80 ortholog of the SWI/SNF ATPase family. Functions as a positive regulator of DNA homologous recombination (HR). In INO80 mutants, the HR frequency is reduced to 15% of that in the wild-type. Mutation in INO80 does not affect sensitivity to genotoxic agents and efficiency of T-DNA integration. INO80 was also shown to regulate a subset of the Arabidopsis transcriptome.
Homologous
- Arabidopsis thaliana — AT3G57300
Gene Resources
- Pfam: PF13892 PF00271 PF00176
- UniProt: A0A2R6Q4H5
- EMBL: NKQK01000020
- AlphaFoldDB: A0A2R6Q4H5
- OMA: RAPSYEL
- InterPro: IPR001650 , IPR027417 , IPR049730 , IPR050520
- PANTHER: PTHR45685 , PTHR45685:SF2
- SUPFAM: SSF52540
- PROSITE: PS51194
- Gene3D: 3.40.50.300
- OrthoDB: A0A2R6Q4H5
- CDD: cd18793
- STRING: 1590841.A0A2R6Q4H5
Sequences
gDNA Sequence
- >CEY00_Acc23133
ATTTTTACTGATTCTTTCATTTCAATTGCAGGACTATATGAATTATAGGAAATATAGATACCTAAGGCTGGATGGATCCTCCTCCATAATGGATCGGCGAGACATGGTCAGGGACTTCCAGCACAGGTAGGGATTTGTTGAATTGTTTTATAGGTGCTTCATTTTTTATTCACAATCTTGTTTCTTATGTCATTCCATTATATCCATCAAATATGGAATTATACAAGTGGCTTGATCATCAAACTATTGACTGTCTCATTGCAGGAGTGATATCTTTGTCTTTTTGCTGAGTACAAGAGCTGGTGGACTAGGCATTAACCTGACAGCTGCTGATACAGTCATTTTCTATGAGAGTGACTGGAACCCGACCTTAGATTTACAAGCAATGGATAGAGCTCATCGGCTGGGCCAGACTAAGGATGTTAGTTTCTTCCTGATTACTTTTTATTTCATTATTGGAACAAATTTTCACTGTCCAAATTGTACGATTAGTGTCTTTTATTATTTCTATAAGAAAAAAATTGAAGAATGATGGCCATAACCATTTGAGATCTAATTAGTAAGACGAAAATATGGAGAGTAATACTGTTTTCGACATTATATTCTTGAAGATTTGAAACATTTCTTATACTCCAGCCGAGTACAAGGATTATACAAACTACTTGACATTCAGTATACTGAATTTTTATTTAGAAATCAGTGCTAGTGTGCACCATATTTAGCTAGTAGGCAGCCGGATAAAATCGAAAAGCTATTGATGAAAGGCTACAGCATCTTGGGGCATATTGTTTATAATATTTACTTGTATGTCTTTAGTGATTTGAAATTAACCGGGATCTCTCTCTCTCTCTCTCTCACCCACCCACACTCCCTCACGCGCGCGCGCACCCACCCACGCACACGCACACACTCGTACAAACACACATACAAGATTTACTCTTTTTTTTTGTAGACTGGAGATCGTGACCTGAGGGAGGGGGAATCTTGGCTATGACAAGGCTCAAACCCTTGACCTCTCCTGATGAGGAACAAAGATTCTTGCATACTGAGCTAACCTATTTAGTTGATTTACTTTGATTGAAGAGTTATATTGCCACTTTGGATAATAGTGATTCTGGGGTTTGTTTCACCGTTGATTTTAATTCTAATCTATTTTTACAATGCAGGTGACTGTCTATCGATTAATTTGTAAGGAGACAGTTGAAGAGAAAATCTTGCAGAGAGCGAGTCAGAAGAACACTGTGCAGCAGCTTGTCATGACTGGTGGTCATGTACAGGATGACCTGTTGGCCCCTGAGGATGTTGTTTCTTTACTGATTGATGACGCCCAATTGGCGCAGAAATTGAAAGAAATTCCACTACAGGTAGGGGCCATTTTAGTTATTAGTCTTTTTTCTTGTTTTCAGGATAGTTTCTTCATATATTCAGCATTAAGTTCAAGCAATTTTGCGCATAAAAATATTCATAATGATTGGAGATCCTTTTGTGGTGTATTTTCTTACTAGGCTAGGGATAGGCAGAAGAGAAAAGGCGGAACAAAACGTATACGGATAGATGCAGAAGGTGATGCTTCTTTGGAAGATGTTACAAACAATGGTTCACAGGGAAATGGAGTTGAGGCGTCTCCTGATCCTGAAAAAGCAAAGTCTAGTAGTAAAAAGGTAACAAAATCTCCCTCTTTATGTTCCGTCTCAAACTTGACTTGTTTCATGATAGTAGGTGTTAGAGAGAACTATACTTGATCCTAAAAATGTCTGATCTAGCAATCAATATCTCTGTTGTGACACAGCAGACAAGACTGGTCTCTTTCCAAATGCAGTTGATTTTTGCTTCTTTTTTGATTTTCTTGTGTGTGATTAGCTTCTTGATGATGCAGCAATGGCCATGTGATAGGGTGAGAATCTAATGCTGTTATTATTTTTTCCCCCTCATTTTATGCTTTTGTGTGTAGAGGAAAGCTACACCTCGAGAAGTTTCAAAAAGTGTGGGTTCTTCATCCCCTAATTCTAGAGCACCGAGCTATGAGTTGGACGATTCCCTTCAGAACACAGAAGCACAGCAGCAGAAACCCAAGAGGCCAAAGAGACCGACCAAGAGTGTGAATGACAACCTTGAACCGGCATTTACTGCCCCGGCTATGGTGGTTCCAGGGTATACCCAAAACCCACTTGACTGTTGACCCGCTGAGGAAGATATTTGATGGCAAAGGAAACAAGTTGTAAACTTGGTGATTCTTCAAAACAGGAAATTTGACTCTGATCGGTCGAGATCATGGCGTTGGTCGAGGGAGTGGCACAGACACATTGTTGAGAGAACTTGGGACTCTCTAACTATAAATACTACTGGAGCAG
CDS Sequence
- >CEY00_Acc23133
ATGAATTATAGGAAATATAGATACCTAAGGCTGGATGGATCCTCCTCCATAATGGATCGGCGAGACATGGTCAGGGACTTCCAGCACAGGAGTGATATCTTTGTCTTTTTGCTGAGTACAAGAGCTGGTGGACTAGGCATTAACCTGACAGCTGCTGATACAGTCATTTTCTATGAGAGTGACTGGAACCCGACCTTAGATTTACAAGCAATGGATAGAGCTCATCGGCTGGGCCAGACTAAGGATGTGACTGTCTATCGATTAATTTGTAAGGAGACAGTTGAAGAGAAAATCTTGCAGAGAGCGAGTCAGAAGAACACTGTGCAGCAGCTTGTCATGACTGGTGGTCATGTACAGGATGACCTGTTGGCCCCTGAGGATGTTGTTTCTTTACTGATTGATGACGCCCAATTGGCGCAGAAATTGAAAGAAATTCCACTACAGGCTAGGGATAGGCAGAAGAGAAAAGGCGGAACAAAACGTATACGGATAGATGCAGAAGGTGATGCTTCTTTGGAAGATGTTACAAACAATGGTTCACAGGGAAATGGAGTTGAGGCGTCTCCTGATCCTGAAAAAGCAAAGTCTAGTAGTAAAAAGAGGAAAGCTACACCTCGAGAAGTTTCAAAAAGTGTGGGTTCTTCATCCCCTAATTCTAGAGCACCGAGCTATGAGTTGGACGATTCCCTTCAGAACACAGAAGCACAGCAGCAGAAACCCAAGAGGCCAAAGAGACCGACCAAGAGTGTGAATGACAACCTTGAACCGGCATTTACTGCCCCGGCTATGGTGGTTCCAGGGTATACCCAAAACCCACTTGACTGTTGA
Protein Sequence
- >CEY00_Acc23133
MNYRKYRYLRLDGSSSIMDRRDMVRDFQHRSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQTKDVTVYRLICKETVEEKILQRASQKNTVQQLVMTGGHVQDDLLAPEDVVSLLIDDAQLAQKLKEIPLQARDRQKRKGGTKRIRIDAEGDASLEDVTNNGSQGNGVEASPDPEKAKSSSKKRKATPREVSKSVGSSSPNSRAPSYELDDSLQNTEAQQQKPKRPKRPTKSVNDNLEPAFTAPAMVVPGYTQNPLDC