Information report for CEY00_Acc03772
Gene Details
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Functional Annotation
- HLP1 is a member of the conserved hnRNP A/B family and contains RNA Recognition Motifs (RRM).It binds mRNA and appears to be involved in targeting alternative polyadenylation (APA). APA targets include genes involved in flowering. Loss of HLP1 function results causes late flowering under long and short day conditions. This phenotype is suppressed by loss of FLC.
Homologous
- Citrullus lanatus: Cla97C10G196620
- Cucumis melo: MELO3C026584
- Cucumis sativus: CsGy3G037790
- Glycine max: Glyma.05G003400, Glyma.19G061100, Glyma.19G003900, Glyma.16G070900
- Gossypium hirsutum: Gohir.A09G029500
- Manihot esculenta: MANES_15G150900
- Medicago truncatula: Medtr6g004810
- Nicotiana attenuata: A4A49_34905
- Populus trichocarpa: POPTR_001G344900v3
- Prunus persica: PRUPE_3G292100
- Rosa chinensis: RchiOBHm_Chr2g0173111
- Solanum lycopersicum: Solyc02g093340.3
- Solanum tuberosum: PGSC0003DMG400012601
- Vitis vinifera: VIT_14s0066g00480
Gene Resources
- Pfam: PF00076 PF05172 PF12108 PF14605 PF16367
- UniProt: A0A2R6RTN1
- EMBL: NKQK01000003
- AlphaFoldDB: A0A2R6RTN1
- OMA: PRVMESQ
- InterPro: IPR000504 , IPR012677 , IPR035979
- PANTHER: PTHR48033 , PTHR48033:SF5
- SUPFAM: SSF54928
- PROSITE: PS50102
- Gene3D: 3.30.70.330
- OrthoDB: A0A2R6RTN1
- STRING: 1590841.A0A2R6RTN1
Sequences
gDNA Sequence
- >CEY00_Acc03772
GATCGAAGGGGACAACATGAAACGGGGAAACAAAAGTTCAAGTTCAACTGCTTATGATCCAGATGCCATTCAACAACAATGGGTGAATTTAACTCTCAATTACAGTCCGAAAAAAGGGGGTGGGGGGTGCAAAAGGTATCGCCGATCCATACCAAGTGGATTAAATTAATGTAAGCACAAGGCCAAAGAAATTTTCTCGGTAAAGAAACCAAAAAACACCGATTCACGAATGTTCTCACTTAAAGAAGATGCAAAGTCCCTCTCTGGCAAATGAATAGTTACCGGATACATCAAGATCACTTGCTTGCAAATCACGACCTACCTTCCATAAGGATGATACCTCCTACCTCCTCCGGCCCCATAACCTCCTCTACTTCCATAAAAGGAACCACCAATGCCACCTCCGTAGCCACTCCCAAGGCCAGCATCGTAGCTACCCCCATAGCTACTGCCACCAGGGCCGGCACTGGCACTGGCACCAGCACCACCGTATCCTCCATAGGTCTCACCAAGCCCACCATAACCACCACCTAGATCATAACCTCTACCAAAACCTCCACCGTAACGGCCTGATGAGTAACCTAAGGATGGCTCTCCTCTGTAACCTCCAAAACTGCCTCCAGCATATTCCCTATAGCCGCCAAACTCACTTTCGCCATAACCACCATAAGCACTAGCTCTAGCTCCATAGGCCCCCCCTGATCGATAAGAACCAACACCAAACCCTGCTCCACCATAACCATCGTACGCATCTCCATACCCACCACCAAATGCAGCTTTAGAAGTACTGTGACGCTTGGATGATGGCGGTGGAGGGTTTGCCTTCTTGGGCTCTGCCTTCTTGATTTCCACCTACAGAGTAAGAGAAACGCAAAACAAGATCACTTTACAAAGATTTTGTAAGGTTGTTTCAAAAAAAAGGAAAAATACAAGTTTGCTACAGATTATTCCACTAAACTAGTGATTAAGCCACAAAAAGATTATCCGTATCTTGACCAAGACCTTGCATTCCAAAAAGTTGGCTCCTTTTAAAAAAAATCAAGCCTAGTTGAGTCGATGAGCAGTGCCGTAGTGAAGCTTCATCACTTGATCCAAGAGACCAGGAGATATACAACCTTTCAGAAGGACGTTTCTCAGTCATGGGCTGTCTAATGAACCAAACCAAGCCTTTGTCCACATCAATTGGGTCAGCTAAAAATTACGCCGAGTTAGTACCCATTGGGGAGGGGAAAGATTGGGTACAAACCTAACATTTGGCATAATATGCACAAAGTGGCTGCTCACAAGACTTTAACCCACAACCTAATGGTTGGGAGGCCAAGCCTTTACCACTTAAACTAATGTCTAATGAACCAATAGGCATAAATTCAATCGTAAGTGCAACGAAGACTGGAAAAGATAGACAGCCGAAGACAGATCAATCCACAAATATGATACTAAACTAGACAACTAAGTCAAATATAGAAGTGAGCAGTATAGGAAAGGGTCAGTAGAAAAAGCAAATAGCCTAACAAAAGAACAGTAAGAAGGACATCATTAGGTCAAATATACGAATAGGTTCATGTACAATGTACACTGCCTTTTTCAACATAAATAGCCCATTCTTAACCCATTAAAATCACGAAAAAATCTTACCTATTGAACTAAAAGTCTTTAGACGAGCAGAGAAACGGCAAATCAGGACAACTTGTCACGAGGGATATGTACTAACCTGAGCTCCAGCAAATTCGATTCTGTTTCCATTAGCCAATAGATCATCAACAGACTGCTCTGTGTCAAATGTAATAAATCCAAATCCACGAGAACGGCTACTGGAATGGTCCCGCATTATTTGGTGATCCTTGACCTCTCCAAATTTTGAAAAGAAGCCTTTGAACTCATCTGACTCATTTTGATATAAAAAAAATCAGGCATAATGTTTGCTATTCAAGCAACCCATGTCGCAATAAATAATAAGACAAACAGACAGAAAATACAATATCACCTTCACCCACTGTTGTTGGAATACCCCCCACAAAGATTTTCTTAGTCTTGAAATCTTTAGAACCATGAGCTCCCCTTGGAATGGTCCGCTTGATTTCAACCTGAAGAATTCAAAACAAACCCACATAATCAAGTCAACAACTGAAGCAGAGAAATCACTGAAATTTCAGAAAAGAAAGGCAACAATTAGAATGAGGATTGACTTTCAACTCAAAATCCCTACTTGCTTTCCGTTGATAATATGTGTGTCCTCAATAACTTTATCAACCACAGAAGGATCTGCATAAGTCACAAACCCAAATCCACGAGGTTGTCCGGTTGCCCGGTCCTTCATAATCACAGAATCCGTGATCTCACCATATCTAGTGAAATGCTTAAGAAATTGAGCTGCATTAACAATTAAGCACACTCTATGAAGTAGAAAAACTATCTTTTTTAAAAATAAAATCAGTAGTGAGTGATAAACAAGGACAAATGACTAACCGGAAGTTGTCTCCCTTGCCAAACCTCCAATAAATATCTTTCTGCACAAGACATTAAGAGTAACAACAGACAAATGAGTACATAAAAGACTTTATCAAGTTCATGGATAGGACCAACACACAAGGGAAAAGATTTGTTCCAAGTGTCTTTCAGCAATTACAAATCATAATATAGACACATCTAATGTATGAAATGTATGCATTGTTGTGGAAGAAAAGGGATTGGAAAGGGAGACTGAATGAGTTTCACATTTCTTTATGAAAAATAAAACAGATGCACAAATTTGGGTTAAAGGTTCTAAGAAATACTTTGGGCTACTGAAGAAAGCAAAGAGATTAAGCTACATGTTCACAAGGTTCAGACCAAATTACAGTAAACACCAAATCCTCTTTGCCTTAAAAGGGGGGGTGGGAGTGGGGGTGGGGGGTGAGTTTCAACAAAACTGAAGATTATATCAATCGCAAACCAAACAGTGAACGTATTTCCACCTTTTCCCATAAACTTAACACAGCACTAATCAACAATTACAGTACAAGTTTATTCGCAAAATTAGGCAAGGAATAAGGAAATTAGCTGAAGGGAAGGGCATCTAAGCAACCATTTATTATCATTAAAGAAAACTTGAAGGAAATATAGAGTAACACATAATTTATGCTTGTGTGTTTCACAAAAAATAATGTTCTACAAAATGTTAGGTACGCAAAAGTGTCATAATGAGATTGGAAGAACCAATCTGAAGAATATTCAAGTGTTTGCCATTAACAAAGGAATCTGATCAGGTCTGGCATACGCATGATGGATAGTCAGAATGTTAACCTAAAAAATCAAATAATTTATAGCACCATAAGTGGGATAGTAATGGACATTACTTGGGTGTAGGGACCACTACAATGGGCAGAAAGGCTTCCATGCTATTGTTTTCACTTTTGACCTTGATAAGAATGATTAAAGCGATACCGTCAAGTGTGAGCAGGCTAGTGAATTTGACAAACTAATTTAGAATAATTTGGGGTGAAATGCAGGGGGGGTAGAGCCTCTTGCATGCACCTCATCATGTTTACAACTATTGTTCAGTTAAGTGGAGCTAACTGAACAATAAGAAAATCTGAAGAATAACTATTCTGGTGATGGGAAAATTCACCACAATCAAAGGAATTTTCAAGCACAATGTTAATAGACCACAAAGCGAGACCCAAAGATGAATGGCGATGCTCAATAAGTAGATCATATCTAAGAAAATGATTATTGAGGTCATAAAGAGCTATTGGTGAAGTTTGATAGTAACACAAGCGATAAGCAAGTCAAAATCGGATTATGTGCAAGGATAAATAGACAATCCCATAATCATTTAAGTGGTTTTCCTATAGCAATACGGGTATTGACAAGAGTTTTCATGTAACACCCCCATCCACTTAAATCATCATCTCTATGCAGGCATCGATCCCTAGTCGGTATAATGTATTCACCACCTCCAAATAGGCACTACCATCTGTAGCCAAAATAGTCAATTTCAATAATTTTTAAAATGCACCCAAGTTCACAACAGTCCTGCACTCCTGTCAATGCAGGTCTAGTGAGGTCAAACGTGTGGAACCTTACCCTGCATGTAGCGAGGTTGTTTCCATATTTCAAACCCATAACGGGCAGTTAACAATGAAGCAACCTAACCGCCACACCTAGTAAAGCAGGATAATTGGTGATCCTGCTCCTGCTCGATTAACTTAGTGTGGTATTGCATTTCACCTATAGAAAATAGTAAACACTACAAATACTACCTTTCTTTGATTGAGAGTTGGTATGATAGAATATTTTGGTGTCAATTTGCCTAATCGAGCAGGGAATGAAGAACACATGCTTAAGGGTAGATATACCACAAAAGTGCAAGGATGCCACGTTTACGAGAAAGTGGTTGCACTCAAAATTAGTAAACTGGACTGTCCACGGAGCCAGTGTAAATTGTAGTTGGAACAATTGTCAATAACATATCCAAAGAGACTCGAGCTACAAAGGTAAGGAATAAGTGTCCCCTCCAAAAAAATATACTAGTCCTTAGTTAGACGAACATTCATAAGATGTTGAAGGTTATCAATTTAAGATAATGAGCTTGAGAAAATAATGTTAGAACCAACACACAAAGTTGCATAAGCAGTAGTAGAGCTTCAATTGGAAGCCTTGTTTGGAACCATGATTCTGAATTCTGATACCAAATAAAAAACAGAAATAAACTGGAAATCGTTTCCTCGCAGATTGCAAGAGCGACCCGGTGTATTGATAATTGAATGTCTACACAACAATCAAGTCAAATTTTATGAAAATCTATACTATATACTAAGCACTAGTAGTGCCACGTGTCAATTCCGCTATTTTTACCAAAAAGTTAAAAAATCAACCAAAATTCCACGTGGACACCCTCAAAATAATTCCCTTTGCTCCTCTCCATCATCCACATTTCCATATTTAAATTATTCTTTTCCTTTAAAAATTCCTCTATTTTTACCAAAAAGTCAATCTTCCGCATTTCCATATTTAAATTATAATTTTCCTTTAGATGGGTATGCAAATCATTCATTTTAATGGGATATTAAGATCATCTTTTAGAAATAAAAACCTAAACCCTAAATCCGTACTTTGCTGCCGCATCTATTCACATATCACTAGCTCTCATCTCATCATCTCAAAAAGTTGCAATAACAACACAAGTTTAAATACTTACATCAATCTTTTCTTACTTTTATTTTCTATTTTTTTCCATTGCACTTCTGCTATAGTACTAGTTATGGTTACATTTTTGTAATTGTTTTTAAACAATCCTTCTGTGTGGAGAATAATTCTACCGAACCAACCCAACCCAAACTAAGATTTTCTCCCAAAATAATTGAAGTCGGCTACACGACTATAGATTCATTTTGATTTTTTTTTAACATTTTTTTAATTATTAGGTGAGCAATAATTTTTTTAACTAATTTTTCATATTGATAGTATTTGTGTCCATTGACGGTGTAATCTCTTTTATCTTCCTCTCAGACTCTTGGATCTATCTTCTAGGGTTTTGAGGGATTTTGATCATCGCAGCGATGGTGATTTCTATAAGATATGTTTTGGCTTCCAATTTTTGGTTGGCTTTCTGTTAACGTTTTTTTCTTCCTCTCAAATTTTCAATTTCTGGATCTGTCTTAAAGGGTTTTGAGGGGTTCAGAATATGGCATGGTGGTGATTCTAATTACGTATGTTTTCTTTTCAATTTTCGTTTGTTTTTTTCTAAACTTTTTTATTCTTCTGTCAATGCTTCTTCTTTTTTTTTTTTTTGAAAAAATCCTCATATTTTTCTTTCTTTTTGGTGTAATCTCTATTTTTTCCTTTGGAGAATATTTGGTTTTTCTTCTCCATATGTGTTTTATTTTGCGTGCTTTTGCTTCTTCTTTTTCCCCTAGTATTTAATTATAGCAATTTTTTTGTCCTTTCTTTTTGTCCTTTCTTTTTGTAATTTTTTGTTATCATTTTTAACTCTGTCGGTTTCTTCATATCTAAAAGAGAGTTCTTTTTCACTTGCTAGAGTGGTTGTGTGATTTGTTTTCTTCGTTCTGTGTTTATATGCATAATACGTATTTCACTTTTATTTTTAATAAAAAAAATATTTTGGACAAGTAAATTCAATAAATATGGGTTTATATGTAGAATATGCATTTTACTCGGAGAACTAAAAAAAATAGAAAGTATTGGTATAGGGTAATGGGAGTGAGGTTAGATTTTTCATCCAACAAACACTGCTCCAAACACAACCTTACTGTTTTTTTATCTTTTGGACTTTTTTTAGTATTATTTCTGTTAATGGATTTACTCATCTTTTTCCCTTTTTTTCCCCTTTTTGGATCATGGGCAGGTTTTTAATCCAACATATTGATCCAAACACAACCTAAATATTTTTAGGGTAAATTGCAAGAATGGTCCTTCTAGTTTTATTCTTCCATGATTTTTGCTCCTATATTTTCAAATCTCGCGATTTTAACTGTACATTTTGATTTTCTCTACTAATCAGTCCAATTGGTAACGGCTGTTATGTTTACAAGGACCAAATCCAAGCAGAGACAAACCAGATGGACCAAAATCGAAGTATAGCCCATTTTTGTTGGAGGACATGGTTTGTTCTCAGGCCTTGGATGAAGCCAACAACAAATTGCAGAATCCGCAACATTAGTAGAAACTAGAGACCCCAACAACAATAGGAACAAATGATGTTGGAGAAACACATGTACTATACCTTTTTTTTACCCTTCTTTTGTTTCTTTTAGATAAATAAGAACAAAATGATTAAGAAAGCCTTCACTTTTACAGGTGATGTTTTGGATATTCGGCTCGAATGACTACAATTCATGGAGTTTTCTGTTTACAAATATTTGTTTTGGACTTTGTAATCAATAAATTTTGATGCTTTTTTTATTGGATCATGGTGTAGAAGCTTTGTTAGCTTTTTGTTTTGTTTCTTAAATATCTCATGAAATTGCTACTATTAGTCATTCTAATATTTATACACTTTTATTTTGCAAGTTGTGGTACTGTTTCATGATTTAAATTTATTTTTTTCATATGTAACGATATTAAAACCATTATATATGAAACAGCTATGCATAGGTAACTGTTAGTTTAAGTTGAAATTTGAATGTGGCTAAACTGATAGGGCTTAGATTTGTACACAATACTCTGGTTGGTCAATGTGAAGAAATCAGGAAACTAATTTATTTCCTAACCCCTAAAGTTCACCGTTATATTCGACGCAAGAACCGACTCGGCTTACAAGAACTGCAGAGGCAAAATTCTTTTCTCTCTTCATTTCCTAGGTTTTCTCGGAAGCCAAACAAACACATCAAGAGAGAGAGAGAGAGAGAGTTACCCGGGGCTGGCTCCATCGCCGGTATGAGGCTGAGACTTGTTGCCTTCGGCGTGGTCTGAGGTGTTAACGTCGTCAGCTTCTCCGTTAGGGGATCCTTCAATATCCCTGTTCTCATCCTCCATGAGCTCCACGGACGGAGACGAAACGGGCGAAACGGCGACAGACGGACGGAGAAAGGGTTTTGAGTGTCGTAGAGATAGATACAGAGAGAGAAGAACGAAGAAATGGAGCCCTCGTTTCTGGTTTGTACCTTT
CDS Sequence
- >CEY00_Acc03772
ATGGAGGATGAGAACAGGGATATTGAAGGATCCCCTAACGGAGAAGCTGACGACGTTAACACCTCAGACCACGCCGAAGGCAACAAGTCTCAGCCTCATACCGGCGATGGAGCCAGCCCCGGAAAGATATTTATTGGAGGTTTGGCAAGGGAGACAACTTCCGCTCAATTTCTTAAGCATTTCACTAGATATGGTGAGATCACGGATTCTGTGATTATGAAGGACCGGGCAACCGGACAACCTCGTGGATTTGGGTTTGTGACTTATGCAGATCCTTCTGTGGTTGATAAAGTTATTGAGGACACACATATTATCAACGGAAAGCAAGTTGAAATCAAGCGGACCATTCCAAGGGGAGCTCATGGTTCTAAAGATTTCAAGACTAAGAAAATCTTTGTGGGGGGTATTCCAACAACAGTGGGTGAAGATGAGTTCAAAGGCTTCTTTTCAAAATTTGGAGAGGTCAAGGATCACCAAATAATGCGGGACCATTCCAGTAGCCGTTCTCGTGGATTTGGATTTATTACATTTGACACAGAGCAGTCTGTTGATGATCTATTGGCTAATGGAAACAGAATCGAATTTGCTGGAGCTCAGGTGGAAATCAAGAAGGCAGAGCCCAAGAAGGCAAACCCTCCACCGCCATCATCCAAGCGTCACAGTACTTCTAAAGCTGCATTTGGTGGTGGGTATGGAGATGCGTACGATGGTTATGGTGGAGCAGGGTTTGGTGTTGGTTCTTATCGATCAGGGGGGGCCTATGGAGCTAGAGCTAGTGCTTATGGTGGTTATGGCGAAAGTGAGTTTGGCGGCTATAGGGAATATGCTGGAGGCAGTTTTGGAGGTTACAGAGGAGAGCCATCCTTAGGTTACTCATCAGGCCGTTACGGTGGAGGTTTTGGTAGAGGTTATGATCTAGGTGGTGGTTATGGTGGGCTTGGTGAGACCTATGGAGGATACGGTGGTGCTGGTGCCAGTGCCAGTGCCGGCCCTGGTGGCAGTAGCTATGGGGGTAGCTACGATGCTGGCCTTGGGAGTGGCTACGGAGGTGGCATTGGTGGTTCCTTTTATGGAAGTAGAGGAGGTTATGGGGCCGGAGGAGGTAGGAGGTATCATCCTTATGGAAGGTAG
Protein Sequence
- >CEY00_Acc03772
MEDENRDIEGSPNGEADDVNTSDHAEGNKSQPHTGDGASPGKIFIGGLARETTSAQFLKHFTRYGEITDSVIMKDRATGQPRGFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPRGAHGSKDFKTKKIFVGGIPTTVGEDEFKGFFSKFGEVKDHQIMRDHSSSRSRGFGFITFDTEQSVDDLLANGNRIEFAGAQVEIKKAEPKKANPPPPSSKRHSTSKAAFGGGYGDAYDGYGGAGFGVGSYRSGGAYGARASAYGGYGESEFGGYREYAGGSFGGYRGEPSLGYSSGRYGGGFGRGYDLGGGYGGLGETYGGYGGAGASASAGPGGSSYGGSYDAGLGSGYGGGIGGSFYGSRGGYGAGGGRRYHPYGR