Information report for Ccrd_015604
Gene Details
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Functional Annotation
- Encodes a protein with several WD40 repeats at the C-terminus and predicted protein-protein interaction domains at the N-terminus. Together with the TOPLESS-RELATED PROTEINS (TPRs), it is thought to be involved in transcriptional repression of root-promoting genes in the top half of the embryo during the transition stage of embryogenesis. It can also interact with IAA12 through the EAR domain of IAA12 and the CTLH domain of TPL. The ability of IAA12 to repress transcription is diminished in a tpl-1 mutant background.
Homologous
- Actinidia chinensis: CEY00_Acc22193, CEY00_Acc22153, CEY00_Acc22194
- Beta vulgaris: BVRB_9g219140
- Citrullus lanatus: Cla97C07G139070
- Cucumis melo: MELO3C017848
- Cucumis sativus: CsGy4G001800
- Glycine max: Glyma.07G028000, Glyma.08G214600
- Gossypium hirsutum: Gohir.A05G121900, Gohir.D05G122800
- Juglans regia: Jr12_20250, Jr12_20240
- Lactuca sativa: gene-LSAT_1X31280
- Manihot esculenta: MANES_04G108600
- Prunus avium: Pav_sc0001734.1_g110.1.mk
- Prunus persica: PRUPE_3G093100
- Rosa chinensis: RchiOBHm_Chr2g0134371
Gene Resources
- Pfam: PF00400
- UniProt: A0A103YBI2
- EMBL: LEKV01001852
- AlphaFoldDB: A0A103YBI2
- OMA: CCRINPT
- InterPro: IPR001680 , IPR006594 , IPR006595 , IPR015943 , IPR027728 , IPR036322 , IPR054080 , IPR054532
- PANTHER: PTHR44083 , PTHR44083:SF45
- SUPFAM: SSF50978
- PROSITE: PS50082 , PS50294 , PS50896 , PS50897
- Gene3D: 2.130.10.10
- STRING: 59895.A0A103YBI2
Sequences
CDS Sequence
- >Ccrd_015604
ATGTCTTCTTTAAGCAGAGAGCTGGTGTTCTTGATCTTGCAGTTTCTTGATGAAGAAAAATTCAAAGAGACTGTTCATAAGCTTGAACAAGAATCAGGGTTTTTCTTTAACATGAAGTATTTTGAAGATGAAGTGCATAATGGGAACTGGGATGAGGTTGAAAAATACCTTTCTGGTTTCACTAAAGTGGATGATAATCGGTATTCGATGAAGATCTTTTTCGAAATCCGAAAACAGAAGTATCTCGAGGCATTGGATAAGAATGACAGGTCCAAGGCTGTCGAGATCCTCGTAAAAGATCTTAAGGTTTTTGCCTCATTTAATGAAGATCTTTTTAAGGAGATAACTCAGTTATTGACTTTGGAGAATTTTAGGGAGAATGAACAACTGTCCAAATATGGAGATACTAAATCAGCTCGGGCTATAATGTTGGTTGAGTTAAAGAAACTTGTTGAAGCAAATCCCTTGTTCCGTGACAAATTGCAATTTCCTAACCTTAAGAATTCAAGGCCGAATCCAGATATCAAAACTTTATTTGTAGACCATTCATGTGGACAACCAAACGGTGCACGTGCTCCATCACCTGGAAACAATCCATTGCTTGGATCATTACCAAAAGCTGGAGGCTTTCCTCCTTTGGGTGCACATGGGCCTTTTCAAGCTACACCGGCTCCAGTACCAAGTCCTCTTGCCGGTTGGATGTCTAATCCTCCAGCCGTATCTCATCCAACGGTTTCTGGTAGTGCCATTGGTCTTGGTGGTCCCTCAATTCCAGTTGGAACACATGTGGGAGACATTGGATTGTGGGAAGTTGGTTCAAGGGAAAAATTGGTTCTTAAAAATTTCAAAGTTTGGAATCTTGGTGCATGTTCAATGCCTCTGCAGGCTGCTCTAGTAAAAGATCCCGGTGTTTCTGTGAACCGTGTGATTTGGAGCCCAGATGGTTCATTGTTTGGAGTTGCATATTCACGGCACATTTTCATATTTTCAACTGCTCTTGACGGCAAGATAAAAGCATGGTTGTATGATAACTTGGGTTCACGAGTTGATTATGAGGCTCCTGGTCGCTGGTGCACAACAATGGCATACAGTGCTGATGGGACGAGGCTTTTTTCATGTGGGACCAGCAAAGACGGTGAATCGCACATTGTAGAATGGAATGAAAGTGAAGGGGCTGTGAAAAGAACCTATATGGGTTTCCGTAAACGATCTTTAGGTGTTGTGCAATTTGATACAACCAAAAACCGATTTTTGGCAGCTGGTGATGATTTTTCGGTTAAATACTGGGATATGGACAATGTTCAGCTTTTAACAAGCGTTGATGCTGATGGAGGTCTTCCGGCAAGTCCACGTATCCGGTTTAACAAAGATGGTGCACTTTTGGCTGTTTCGGCTAACGATAATAATATCAAAATCTTGGCGAATTCAGATGGTCTTCGATTACTTCGCACTTTTGAAAATCTTTCTTTTGATGGTGCTGCTTCAAGAACTCCTGAAGCCGCAAAGCCCGCCATAAACGCAATATCTGCTGCGGCCGCTAGTACCGCTGCATTAGCGGAAAGGACGATGACGACATTCATGCCTCCGCCACCAGCAGCAACATTTCTTGCTTTCCATCCTCAAGACAACAATATCATAGCAATTGGCATGGATGACTCAACGATCCAGATTTATAACGTTCGTGTGGATGAGGTTAAAAGCAAGCTTAAAGGCCACTCAAAAAGAATCACGGGGCTCGCTTTTTCTCATGTGCTAAAGGTCCTAGTCTCATCAGGTGCCGATGCTCAGATCTGTGTATGGAGTTCCGACGGATGGGAAAAGCAAAAGGCACGATACGTGCAACTCCCACCAGGGAGGACGCCAACGCCACAGTCTGACACTCGTGTCCAGTTTCATCATGATCAGATCCATTTCCTTGTTGTTCACGAGACTCAACTCGCTATTTATGAAACAACAAAACTAGAATGCGTGAAACAGCTGATTTACGCAAGTTTCTTTGATGCAACCATCTGCGTGTTCACTGCTTCTCACCTCCGCCTTTGCTGTCGCATTAATCCCACCGCTAATCTAAATGTGCATCCGTTGGTGATCGCTGCTCATCCACAAGAACCGAATCAGTTTGCATTAGGGCTTTCAGATGGTATTGTTCATGTGTTGGAGCCACTTGAATCGGATGGCCGATGGGGGGTGCCACCACCGGCTGAAAATGGTTCGACGAGCACTGTAGCGGCTACATCCCTGGCTGCAGGGTCAGGGTCAGAACAACCAACCCAGAGATGA
Protein Sequence
- >Ccrd_015604
MSSLSRELVFLILQFLDEEKFKETVHKLEQESGFFFNMKYFEDEVHNGNWDEVEKYLSGFTKVDDNRYSMKIFFEIRKQKYLEALDKNDRSKAVEILVKDLKVFASFNEDLFKEITQLLTLENFRENEQLSKYGDTKSARAIMLVELKKLVEANPLFRDKLQFPNLKNSRPNPDIKTLFVDHSCGQPNGARAPSPGNNPLLGSLPKAGGFPPLGAHGPFQATPAPVPSPLAGWMSNPPAVSHPTVSGSAIGLGGPSIPVGTHVGDIGLWEVGSREKLVLKNFKVWNLGACSMPLQAALVKDPGVSVNRVIWSPDGSLFGVAYSRHIFIFSTALDGKIKAWLYDNLGSRVDYEAPGRWCTTMAYSADGTRLFSCGTSKDGESHIVEWNESEGAVKRTYMGFRKRSLGVVQFDTTKNRFLAAGDDFSVKYWDMDNVQLLTSVDADGGLPASPRIRFNKDGALLAVSANDNNIKILANSDGLRLLRTFENLSFDGAASRTPEAAKPAINAISAAAASTAALAERTMTTFMPPPPAATFLAFHPQDNNIIAIGMDDSTIQIYNVRVDEVKSKLKGHSKRITGLAFSHVLKVLVSSGADAQICVWSSDGWEKQKARYVQLPPGRTPTPQSDTRVQFHHDQIHFLVVHETQLAIYETTKLECVKQLIYASFFDATICVFTASHLRLCCRINPTANLNVHPLVIAAHPQEPNQFALGLSDGIVHVLEPLESDGRWGVPPPAENGSTSTVAATSLAAGSGSEQPTQR