Information report for Ccrd_015547
Gene Details
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Functional Annotation
- RNA binding protein with nuclease activity essential for stress response. Involved in mechanisms acting on mRNAs entering the secretory pathway. Functionally redundant with TSN2.
Homologous
- Actinidia chinensis: CEY00_Acc17948
- Capsicum annuum: T459_10648
- Daucus carota: DCAR_025630
- Glycine max: Glyma.06G162500, Glyma.04G203000
- Juglans regia: Jr02_00090, Jr09_00040
- Lactuca sativa: gene-LSAT_4X85420, gene-LSAT_1X29960
- Musa acuminata: Ma06_g09860
- Nicotiana attenuata: A4A49_00147, A4A49_34164
- Sesamum indicum: SIN_1010823
- Solanum lycopersicum: Solyc03g118010.3, Solyc03g118020.3
- Solanum tuberosum: PGSC0003DMG400014229
- Vitis vinifera: VIT_00s0283g00020, VIT_14s0068g00720
Gene Resources
- Pfam: PF00565 PF00567
- UniProt: A0A103YBM6
- EMBL: LEKV01001849
- AlphaFoldDB: A0A103YBM6
- OMA: ARCADHH
- InterPro: IPR002999 , IPR016071 , IPR016685 , IPR035437
- PANTHER: PTHR12302 , PTHR12302:SF2
- SUPFAM: SSF50199 , SSF63748
- PROSITE: PS50304 , PS50830
- Gene3D: 2.30.30.140 , 2.40.50.90
- STRING: 59895.A0A103YBM6
Sequences
CDS Sequence
- >Ccrd_015547
ATGGCGCAAGCAGCTGGAAATTCAGGATGGCTGAGAGGAAAAGTAAAAGCTGTTTTGTCTGGTGACACCTTGGTGATTATGGGATTTACCAAAGCTGAAATCCCCCCTGAAAAGACTGTCGTTTTAGCTCATCTTTCCGCTCCAAGATTAGCACGGAGAGGTGGCCAGGATGACCCATTTGCATGGGAAAGCAGAGAATATCTACGGAAGCTGTGTATAGGAAAGGATGTTGTTTTTAGAACGGAATATACCATTCCAAATTTCTCCCGAGAATTCTGCAGTGTTTTCATTGGCACTACAAATGTTGGGAACGAGGTTGTCACTCACGGCTGGGCTAAGGTTAAGGAGGCTAAAGGAGAGGTGACTCCTGAGCATACTGAATTGCTACGCCTTGAAGAACAAGCCAGACAACAGGGAGTAGGTTTATGGGACAGGGTTAGTTACTGTCTCTTAACCCAATTGATTGCTAGTTATTTGGTTCCTCGTCATATGTCTCCGGGTTCTGTTGAGGCAGCTATCAGGAACCTCCCACCATCTGCTGTTGGTGATCCCAGCAATCTGGATGCGATGGGGCTTTTAGCTACAAACAAAGGCAAACCCATGGAAGCTATTGTAGAGCAAGTTCGTGATGGGAGCTCACTTCGTGTTTATTTGCTTCCGGGGTTTCAGTTTGTCCAAGTATTTGTTGCTGGAATCCAGTCCCCATCGATGGGAAGAAGGACAACACAAGAATCTACTATAGTAACTGAAGTACCATCCGATGAACCAAATGGAGAAGCTAATGCGGAGTCTCGTGGCCCCTTGACATCAGCCCAGAGAGTTACTGCCTCATCAACCTACAATGAAGTTGCCGCAGACCCCTATGGGAGGGAAGCTAAACATTTCACTGAGATTCGTGTCCGCATTGTTCTCGAGGGTGTTGACAAGTTCAGCAATTTGATTGGTTCTGTCTATTACTCCGATGGTGAATCAGCAAAGGACCTGGCAATGGAGCTTATTGAAAATGGATATGCTAAATATGTCGAGTGGAGTGCAAGTATGATGGAAGATGAAGCCAGGAGGAAGTTGAAGGCTGCAGAACTTCAAGCAAAGAAGACCAAGTTGAGGCTTTGGACAAACTATGTACCCCCAGCCACTAATTCAAAGGCGATATCAGACAATTTCACTGGAAAGGTAGTAGAAGTTGTTAGTGGGGACTGCATCATTGTTGCGGATGATTCTCTTCCATTCGGCAGTCCAGCAGCTGAGCGACGAGTCAATCTCTCAAGTATCAGGTGCCCCAAACTGGGAAATCCACGGAGAGAGGAGAAACCTGCTCCTTATGCCCGTGAAGCAAGGGAATTTCTGAGAACAAGATTAATTGGCCGTCAAGTTCAAGTTTCAATGGAATACTCTCGGAAGGTCCCCCTTGCCGATGGATCTGCTGCCCCAGCTGGGCCAGCAGATTCAAGGGTAATGGGCTTTGGATCAGTCTTCCTCTTGTCTCAAGGGAAGGAAAGTGAAGATGTCTCTGCTGCTCCCCCTACAGCAGTCACTCAGCAGCCTGGTGTGAATGTTGCTGAACTCGTTATTGCTCGTGGGTTTGGCACTGTCATTAGACATAGAGACTTTGAGGAAAGATCAAATTACTACGAGAATCTTCTTGCAGCTGAAACTCGTGCTACTGCTGGAAAGAAGGGAATTCATTCTGCTAAAGACCCTCCTGTTATGCACATTATGGATCTCTTGACGGCCTCGGCCAAGAAAGCCAAAGATTTCCTCCCGTTTCTGCAACGAAACAGGAGGATGACTGCTGTTGTTGAATACGTCCTTAGTGGTCACAGATTTAAACTATTTGTCCCTAAAGAAACATGCAGCATCGCTTTCTCATTTTCTGGGGTCAGATGCCCTGGACGTGATGAGCCTTACTCCAATGAAGCAATTTCACTTATGAGACGGAAGATAATGCAGAGGGATGTAGAGATTGAAGTGGAAACAGTTGATAGAACTGGTACCTTCTTGGGCTCTTTGTGGGAATCAAAATCTAATGTGGCAATCATTCTTCTGGAAGCTGGACTTGCAAGACTTCAGACGTTTGGCGCTGATAGGATTCCAGATGCTCATCTTCTTGCTCAAGCCGAGCAGTCTGCCAAGAAGCAGAAATTGAAGGCAAGAAGCTTGATATGGGAAAACTATGTGGAAGGAGAGGAAGTTACTAATGGTGCAGCTCCTGATAGAAAACAGAAAGAAGAATTCAAGGCCGTGGTGACTGAAGTCCTTGGCGGAGGCAAATTCTATGTTCAGAATGTTGCAGATCAGAAAGTTGCTTCCATCCAGCAACAACTTGCTTCTTTAAACCTCAAAGAAGCACCCGTGCTTGGTGCATTTAACCCAAAGAAGGGCGATATTGTCGTAAGCGCTCCACGTGGTGTCGTTCAATCGACTAAAGACAGATTCGAAGTCTTTTACATCGATTATGGAAATCAAGAAGCTGTTACATATACCCAGTTGCGTCCACTGGATGCATCGGTATCGTCTGCACCTGGGCTGGCTCAACTTTGCCAACTTGCTTACTTAAAGGTACCGACTTTGGAGGAGGATTACGGTCAGGAAGCAGCCATGCTTCTAAGCGAAAGCACACTTAACGGGCCAAAGGAATTCAGGGCAGTGATTGAGGAGAGGGATACTTCTGGAGGAAAAGTGAAAGGGCAAGGAACCGGAACTATTATTTTGGTAACTTTGATTGATGAGGAAGCCGATACGAGTGTTAACGCCATGATGCTGAAGGTTGCAAGGTTGGAGAAAAGGAGGAGATGGGAGCCTAAAGACCGACAAGCTGTGCTGGATGAATTAGAAAAGCATCAGACAGAAGCGCGTACCAAAAGATTGGGAATGTGGGAGTATGGTGATATCCAGTCTGATGACGATGAGAACCCTCTGCCTGCTAAGAAAACAGGTGCTGCTGGCAAACGTTAA
Protein Sequence
- >Ccrd_015547
MAQAAGNSGWLRGKVKAVLSGDTLVIMGFTKAEIPPEKTVVLAHLSAPRLARRGGQDDPFAWESREYLRKLCIGKDVVFRTEYTIPNFSREFCSVFIGTTNVGNEVVTHGWAKVKEAKGEVTPEHTELLRLEEQARQQGVGLWDRVSYCLLTQLIASYLVPRHMSPGSVEAAIRNLPPSAVGDPSNLDAMGLLATNKGKPMEAIVEQVRDGSSLRVYLLPGFQFVQVFVAGIQSPSMGRRTTQESTIVTEVPSDEPNGEANAESRGPLTSAQRVTASSTYNEVAADPYGREAKHFTEIRVRIVLEGVDKFSNLIGSVYYSDGESAKDLAMELIENGYAKYVEWSASMMEDEARRKLKAAELQAKKTKLRLWTNYVPPATNSKAISDNFTGKVVEVVSGDCIIVADDSLPFGSPAAERRVNLSSIRCPKLGNPRREEKPAPYAREAREFLRTRLIGRQVQVSMEYSRKVPLADGSAAPAGPADSRVMGFGSVFLLSQGKESEDVSAAPPTAVTQQPGVNVAELVIARGFGTVIRHRDFEERSNYYENLLAAETRATAGKKGIHSAKDPPVMHIMDLLTASAKKAKDFLPFLQRNRRMTAVVEYVLSGHRFKLFVPKETCSIAFSFSGVRCPGRDEPYSNEAISLMRRKIMQRDVEIEVETVDRTGTFLGSLWESKSNVAIILLEAGLARLQTFGADRIPDAHLLAQAEQSAKKQKLKARSLIWENYVEGEEVTNGAAPDRKQKEEFKAVVTEVLGGGKFYVQNVADQKVASIQQQLASLNLKEAPVLGAFNPKKGDIVVSAPRGVVQSTKDRFEVFYIDYGNQEAVTYTQLRPLDASVSSAPGLAQLCQLAYLKVPTLEEDYGQEAAMLLSESTLNGPKEFRAVIEERDTSGGKVKGQGTGTIILVTLIDEEADTSVNAMMLKVARLEKRRRWEPKDRQAVLDELEKHQTEARTKRLGMWEYGDIQSDDDENPLPAKKTGAAGKR