Information report for Ccrd_011696
Gene Details
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Functional Annotation
- Encodes a protein containing Leu-rich repeats and a degenerate F-box motif. Associates with AtCUL1, AtRbx1, and the Skp1-like proteins ASK1 and ASK2 to assemble SCF COI1 ubiquitin-ligase complexes in planta. A single amino acid substitution in the F-box motif of COI1 abolishes the formation of the SCF(COI1) complexes and results in loss of the JA response. Required for wound- and jasmonates-induced transcriptional regulation.
Homologous
- Actinidia chinensis: CEY00_Acc03729
- Citrullus lanatus: Cla97C07G132430
- Gossypium hirsutum: Gohir.D04G066700, Gohir.A05G316300, Gohir.A10G229500, Gohir.D10G243500
- Juglans regia: Jr12_24030
- Lactuca sativa: gene-LSAT_9X61461, gene-LSAT_2X122000, gene-LSAT_8X12401
- Manihot esculenta: MANES_07G125200
- Nicotiana attenuata: A4A49_03444
- Prunus avium: Pav_sc0002574.1_g060.1.mk
- Prunus persica: PRUPE_2G246000
- Rosa chinensis: RchiOBHm_Chr1g0369351
- Solanum lycopersicum: Solyc05g052620.3
- Vitis vinifera: VIT_13s0019g03380
Gene Resources
- Pfam: PF18511 PF18791
- UniProt: A0A118K602
- EMBL: LEKV01001037
- AlphaFoldDB: A0A118K602
- OMA: CYTATPD
- InterPro: IPR032675 , IPR041101 , IPR041567
- PANTHER: PTHR16134 , PTHR16134:SF43
- SUPFAM: SSF52047
- Gene3D: 1.20.1280.50 , 3.80.10.10
- OrthoDB: A0A118K602
- CDD: cd22159
- STRING: 59895.A0A118K602
Sequences
CDS Sequence
- >Ccrd_011696
ATGGAGGATCGGAGCTACACCAACCAGCGGATTCACGGCATGTCAGATGTCGTTTTCGAGTGTGTGTTATCGTACATAAACGACTCACGTGACCGTCAATCTATATCGTTGGTCTGCCGCCGGTTATACGAGCTCGAAGCTCAGACACGTAAGCACGTGACTATAGCTCTGTGTTACACAGCCACCCCTAAACAGCTGTGGCGGAGGTTCCCGTTTCTTGAATCTTTGAAGCTGAAAGGAAAGCCACGCGCCGCCATGTATAACTTAATACCAGAGGACTGGGGTGGGTTTGCGACGCCATGGGTGGAGGAGCTTGCCAAATCTTTCACTTGCTTAAAAGCTGTGCACTTCAGAAGGATGATTGTAAAGGATGAAGATCTTGAGCTACTGGCACGTGAGCGTGGCCATGTTCTTCAGGTTCTTAAGCTTGATAAATGCTCTGGATTTTCTACTGATGGCCTTCTCCATATTTGTCGCTCCTGCAGGAACCTTAAAACCTTGTTTTTAGAAGAGAGCCAAGTGATGGAAAAGGATGGAAACTGGCTACATGAGCTTGCTATGAACAATACTCTACTTGAAACATTGAACTTTTACATGACGGATCTTACTCAAACTAGGTTTGAAGATCTTGAGCTAATAGCCAGAGGATGCAAGTCTTTATTATCGGTCAAGATAGGCGATTGTGAAATCTTGGATCTTGTTGGTTTTTTCCAGTCTGCTGTTTCGCTTGAAGAATTTGGTGGTGGTTGCTTCAATGATCAAGCTGAACGCTATGCCTCTGTGGCATACCCTCCTAGATTATGCCGTTTAGGGATGAATTATATGAGTACGAATGAAATGCCCATTGTTTTCCCCTTTGCTTCGCGGCTAAAAAAGTTGGATCTTTTATATGCCCTTCTTGACACAGAAGACCATTGTCTTTTGCTCCGAAGGTGTCCCAATTTGGAAGTTCTTGAGACAAGAAATGTGATTGGAGATCGTGGAATGGAAGTTCTATCTCGCTATTGCAAGAAGATAAAGCGGCTTAGAATCGAGCGAGGAGCTGATGAACAAGAAATGGAAGATGAGGAAGGTATAGTTTCTCAAAGGGGATTAACCGCTTTATCACAAGGTTGTCTCGAGTTGGAATATATTGCTGTTTACGTATCTGATATCACAAACGCAGCTCTAGAATCGATGGGAATGAACTTGACTAATTTGTGTGACTTCCGAATGGTGTTGCTGGATCGAGAAGAAGTGATCACAGACTTGCCACTCGATAATGGAATCCGGTCTTTACTAAGTGGCTGCCAAAAGCTTAGAAGATTTGCACTCTATCTCCGACCAGGAGGGCTAACCGATGTGGGTTTGGCTTATATCGGTCAATACAGCCAGAATATAAGATGGATGCTTCTGGGGTACGTCGGAGAATCTGATACAGGGCTTCTAGGGTTTTCTAGAGGGTGCCCTAGCCTACAAAAACTAGAAGTTAGAGGATGTTGTTTCAGTGAACATGCACTTGCGATCGCTGTTCTTCAGCTGAGATCGCTAAGATACTTATGGGTACAAGGGTATAGGGGATCACCGACTGGATGTGATCTGTTAGCAATGGCGCGACCATTTTGGAATATTGAAATAATTCCTCCAAGAAAGGTTAATGCTGGAGAAGAAAGAGAGATGGAACATCCTGCACACATTCTTGCATATTACTCTCTTGCTGGACCAAGAACCGACTTTCCGCCATCTGTTATCCCGATTGACTCCATTGCCACCTGA
Protein Sequence
- >Ccrd_011696
MEDRSYTNQRIHGMSDVVFECVLSYINDSRDRQSISLVCRRLYELEAQTRKHVTIALCYTATPKQLWRRFPFLESLKLKGKPRAAMYNLIPEDWGGFATPWVEELAKSFTCLKAVHFRRMIVKDEDLELLARERGHVLQVLKLDKCSGFSTDGLLHICRSCRNLKTLFLEESQVMEKDGNWLHELAMNNTLLETLNFYMTDLTQTRFEDLELIARGCKSLLSVKIGDCEILDLVGFFQSAVSLEEFGGGCFNDQAERYASVAYPPRLCRLGMNYMSTNEMPIVFPFASRLKKLDLLYALLDTEDHCLLLRRCPNLEVLETRNVIGDRGMEVLSRYCKKIKRLRIERGADEQEMEDEEGIVSQRGLTALSQGCLELEYIAVYVSDITNAALESMGMNLTNLCDFRMVLLDREEVITDLPLDNGIRSLLSGCQKLRRFALYLRPGGLTDVGLAYIGQYSQNIRWMLLGYVGESDTGLLGFSRGCPSLQKLEVRGCCFSEHALAIAVLQLRSLRYLWVQGYRGSPTGCDLLAMARPFWNIEIIPPRKVNAGEEREMEHPAHILAYYSLAGPRTDFPPSVIPIDSIAT