Information report for Ccrd_004952
Gene Details
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Functional Annotation
- Involved in later steps of the gibberellic acid biosynthetic pathway. Activated by AGAMOUS in a cal-1, ap1-1 background. Deletion of 208 bp from -1016 to -809 (󟵈) resulted in loss of GA-negative feedback (this sequence, which contains a 43-bp sequence GNFEI, was shown to be sufficient for GA-negative feedback).
Homologous
- Actinidia chinensis: CEY00_Acc22231, CEY00_Acc22187, CEY00_Acc12586
- Capsicum annuum: T459_17479
- Juglans regia: Jr07_30550
- Lactuca sativa: gene-LSAT_5X133201, gene-LSAT_1X34061
- Manihot esculenta: MANES_11G050500
- Nicotiana attenuata: A4A49_10689
- Populus trichocarpa: POPTR_001G176600v3, POPTR_003G057400v3
- Prunus avium: Pav_sc0000716.1_g300.1.mk
- Prunus persica: PRUPE_3G075600
- Vitis vinifera: VIT_09s0002g05270
Gene Resources
- Pfam: PF14226
- UniProt: A0A124SC83
- EMBL: LEKV01004799
- AlphaFoldDB: A0A124SC83
- InterPro: IPR005123 , IPR026992 , IPR027443 , IPR044861 , IPR050231
- PANTHER: PTHR47990
- SUPFAM: SSF51197
- PROSITE: PS51471
- Gene3D: 2.60.120.330
- STRING: 59895.A0A124SC83
Sequences
CDS Sequence
- >Ccrd_004952
ATGCATACTTTCAAATCTCATCCCATCATCTATCACAAACATTTAGACCTAAATTCCATGAAAGAATTACCAGAATCACATGCATGGTTGTCTCCAGATCATGGGTCTCCTTCTAAAGCCTCCAGCAATCCAGATTCAGTTCCAGTTATCAATCTTCAAGATCCAAACTCCATGAAACTTGTTGGCCATGCATGCAAGACCTGGGGTGTGTTTCAGATCACCAATCATGGAGTTCCTGCAAATCTTCTTCAAGATATGGAGTCTGCAGGCAGAAAGCTGTTTGCACTTCCGATTCAGCAGAAACTTAAAGCGGCTCGAGCTCCGGACGGGGTTTCTGGCTATGGTGTCGCGAGGATATCTTCGTTTTTCCCGAAACTTATGTGGTCCGAAGGGTTTACGATCATTGGATCGGTTTATGAACATGCTCGTAAACTATGGCCCAAGAGTTATACTACCTTCTGTAATTTGATTGAAGAATACAACGAAGAAATGAACAAATTAGCGGAAAAACTCATGAGTTTGATGTTGGGATCATTAGGGGTTACAATGGAAGATGTACAATGGGCTAACTCAAATGGTTCATGTCCAGCTTTACAGTTCAACTCCTACCCAGCTTGTCCCGATCCAGAGCGAGCCATGGGTCTAGCGGCTCACACCGATTCGACCCTCTTAACCATTCTTCATCAAAACAACACAAGTGGACTCCAGGCTCACAGGGACGGACCCGGATGGGTCACAGTCCCTCCAATCCCTGGAGCACTTGTGGTCAATGTAGGTGACCTACTTCACATACTATCCAACGGTTTATACCCAAGTGTCCTTCACCGAGCCGTAGTAAACCGCACCCAACACCGCCTATCCATCGCTTATCTTTACGGACCACCATCAAATGTCCAAATCTCACCTCTATCCAAACTCACAGACCAAATCCACCCGCCTCTTTTCCGACCTGTCACATGGAGCGAATACCTTGGCACGAAAGCGAAACACTTCAACAAAGCATTATCTTCGGTCCGTTTATGCGCACCCTTGAACGGATTCGTCGATTCCAACGACCACAACGGACTAAAAACGCACAATCGAGACGATCGTTTCATCTGGGAATCCATAAGAACCGATGTTTTCAACGCTTTTCGAGACTACGGTTGCTTCGAAGCGTCTTCGTTTGTATCTATCGATCTTCAAGAATCCGTTCACGATGCATTGAAACAGTTGTTTGATCTCCCGTTAGAAACCAAGCTTCGAAACACATCAGAAATCGCCTTCCATGGATACGTCCAATCTCCTAAGGTTCCGCTCTACGAAAGCATGGGAATCGGAAACCCGTTCATCTCGGAAAACGTCGCCAGTTTCACCGATCTCATGTGGCCTCACGGAAACGCTAAATTTTGTGAAAGTATCAAGACGTACTCGAGGAAGTTGCACGAATTGGACGTGACGGTGAAGAAGATGGTTTTCGAGAGCCTGGATTTGGAGAATTACTTGGACGAAGAAATGCAATCAACGGGTTACCTTCTTAAGATGATGAAATACCGAGCACCGGAGCCAAATGAATCCGATATCGGACTCCATACTCATACCGACACTAATATAATGACGATTTTACATCAGGACGAAATCGGAGGGTTAGAGATCCAGACGAAAGATGAAGAATGGATACGAATCGAAATGGGTTCAGACGCATACATTCAGCTTCCCGTTATCGATTTCTCAATGCTAAGTTATAACCAGAACCCAGAAGCTACTGATCATCTTCTTCACTGGGACTCCATGAAAACCCTAGTTCTTGAGTCTCTGCAGAAATATGGTTGTTTTCAAGCTTCCATGGATGGAGTTCCACCAGAGCTTCATAAGTCTGTGTATGGTGCAATGAAGAATCTCTTTGATCTGCCATTGGAGATGAAAGCAAAGAATAAGCTGACGGAAATGGAACGAATGGTGAAAAAGATGGTGTTCGAGAGCTTCGATTTGGGGAAGCATTTGAACGAACACATGGAACTAACACGCTACGTGCTCAAGCTCATGAAATACCGAGCGCCTGAGCCAAACGAAACGAATCTTGGATTGCACGCTCATGCGGATTCTGGGATAATGACGGTTTTACATCAAAACGAAGTCGAAGGATTAGAGATTCAGATGGAAGACGAAGAAGAATGGCTCAAGCTTCCCACCATACTTTTTTCCGACATAAGCAAGAAAGATCGAGGAACCCTTATCTGGGATTCGGCGAAAAACCAGGTGTTCAAAGCCCTCCAAGAATACGGTTGCTTTGAGGCATCTTTCGATGGGGTTTCACCTGATCTTCGAGAATCAGTGTTTGCTTCCTTGAAGCAGCTGTTCGATCTCCCTCTAGAAACAAAGGTAAGAAACGTTCCTGACAAGATCTTCAATGGCTACATCGGACTAGCTGAAGAGGTTCCGATATACGAGAGCTTGGGAATTGAAGACCCTGAAATCTTTTCTAATATCATGTGGCCTGATGGAAACCGTCAATTTTGTGATAGCATGCAAGCCTATACGAAGATGTTAACAGAGGTTGATGAAATTGTGAGGATGATGGTTCTCGAGAGCTTAAATTTGGAGAAACACATGGATGAACACATGGAACTAACGAGCAGTCTTGTTAGGGTTAATAAATACCGAATGCCCGAGAAAGACGAATCCGATATGGGATTACTTAGTCATGCAGATAAAAATGTAGTGACTATTTTGCATCAAAATGAAGTTGGAGGACTAGAGGTGCAAACAAAAGATGAAGAATGGTTCAAAGTGAAATTTTCCCCAAATAGTTTCGTGGTCATGGCAGGAGAATCCTTCAAT
Protein Sequence
- >Ccrd_004952
MHTFKSHPIIYHKHLDLNSMKELPESHAWLSPDHGSPSKASSNPDSVPVINLQDPNSMKLVGHACKTWGVFQITNHGVPANLLQDMESAGRKLFALPIQQKLKAARAPDGVSGYGVARISSFFPKLMWSEGFTIIGSVYEHARKLWPKSYTTFCNLIEEYNEEMNKLAEKLMSLMLGSLGVTMEDVQWANSNGSCPALQFNSYPACPDPERAMGLAAHTDSTLLTILHQNNTSGLQAHRDGPGWVTVPPIPGALVVNVGDLLHILSNGLYPSVLHRAVVNRTQHRLSIAYLYGPPSNVQISPLSKLTDQIHPPLFRPVTWSEYLGTKAKHFNKALSSVRLCAPLNGFVDSNDHNGLKTHNRDDRFIWESIRTDVFNAFRDYGCFEASSFVSIDLQESVHDALKQLFDLPLETKLRNTSEIAFHGYVQSPKVPLYESMGIGNPFISENVASFTDLMWPHGNAKFCESIKTYSRKLHELDVTVKKMVFESLDLENYLDEEMQSTGYLLKMMKYRAPEPNESDIGLHTHTDTNIMTILHQDEIGGLEIQTKDEEWIRIEMGSDAYIQLPVIDFSMLSYNQNPEATDHLLHWDSMKTLVLESLQKYGCFQASMDGVPPELHKSVYGAMKNLFDLPLEMKAKNKLTEMERMVKKMVFESFDLGKHLNEHMELTRYVLKLMKYRAPEPNETNLGLHAHADSGIMTVLHQNEVEGLEIQMEDEEEWLKLPTILFSDISKKDRGTLIWDSAKNQVFKALQEYGCFEASFDGVSPDLRESVFASLKQLFDLPLETKVRNVPDKIFNGYIGLAEEVPIYESLGIEDPEIFSNIMWPDGNRQFCDSMQAYTKMLTEVDEIVRMMVLESLNLEKHMDEHMELTSSLVRVNKYRMPEKDESDMGLLSHADKNVVTILHQNEVGGLEVQTKDEEWFKVKFSPNSFVVMAGESFN