Information report for CCACVL1_10246
Gene ID: CCACVL1_10246
Suggest Gene Name: BAF60, CHC1
Description: putative flowering gene
Species: Corchorus capsularis
Source: Putative flowering gene from PlantCFG
CHC1 is predicted to encode a protein that belongs to the chromodomain remodeling complex. Two RNAi knock-down lines have a dwarf phenotype and reduced rates of Agrobacterium-mediated transformation. The low rate of root-mediated transformation rate may result from altered root morphology or reduced root growth rates.
Copy
>CCACVL1_10246
ATGTCTGTGAACAACAATAATCCCCCAAAGAACCTTGGGCCCTCTTCCTCGCCCTTTGGTAATGCGGGGATGGTACCTCCATCTATGACTGGAAACCCAGCATTCTCACAAGCACAAGCACAGGCTCAGGCTCAACTAAATGCTGGTTTTCAGCATCAGTTTCAACTTTCCCAAGCTCAGGCGCTTGCTCAGGCTCAGTCAAAAGCGCATGCTCAAGCGCAGGTAGCTCATGCCCAGTTACAAGCACACCTACAAGCTCAAGGGTTAGCCCTTAACCAGGCTCAGAATGCAGGCATTGGGAATTTAGGTTCATCTTCGCCATCCATGTCTACTCCTGGCAGTGCAAGTGCAAAGAGGATCCTTCAAAAGCCCCCTGTGCGCCCTCCTGGTGTTCCAATGACGAATACAATGTCCCCTTTGAGAACTATGGATCTTACGCCCGCTGCACGTAGAAAGAAGCAGAAGCTTCCTGAGAAACAGATGCAGGAAAGAGTGGCAGCAATTCTTCCCGAATCTGCTCTATACACCCAGCTGCTTGAGTTTGAAGCACGTGTTGATGCTGCATTAGCTCGGAAAAAGGTCGACATCCAGGAAGCACTTAAGAACCCACCCTGTGTTCAGAAAACTCTTAGAATATATGTTTTCAACACATTTGCTAATCAGATTAAGACAATTCCAAAGAAGCCTAACGCAGAGCCCCCTGTGTGGACCCTCAAGATTATTGGGAGGATCTTGGAAGACGGGGTAGATCCAGATCAGCCTGCCTTTGTTCAAAAAACGAATCCCTTGTACCCAAAGTTTTCATCCTTCTTCAAGAGAGTGACGATTTCCTTGGACCAGAGACTGTATCCAGACAATCACATCATTATATGGGAGCATGCTCGATCACCTGCACCTCATGAAGGTTTTGAAGTGAAGAGAAAAGGTGATAAGGAATTTACTGTGAATATACGATTGGAAATGAATTATACACCTGAGAAGTTCAAGCTATCTTCAGCTTTAATGGAAGTCCTTGGGATTGAGGTTGATACGCGCCCGAGAATTATTGCTGCAATTTGGCATTATGTAAAGGCTAGAAAACTTCAGAATCCAAATGATCCATCTTACTTTAACTGTGATCCACAGCTTCAAAAGGTTTTTGGGGAAGAAAAGGTGAAATTTACCATGGTTTCACAGAAGATATCGCAGCATTTAACTGCACCACCACCCATACATTTGGAGCATAAGATTAAGCTTTCCGGGAATTGTCCTGCTGGAACTGCATGCTATGATGTGTTAGTCGATGTGCCCTTCCCCATACAAAGGGAATTGTCTGCTCTGTTGGCAAATGCGGAGAAGAGCAAAGAAATTGAAGCATGTGATGAAGCAATATGTGCTGCCATTAGGAAAATTCATGAGCACCGAAGAAGGCGTGCATTCTTTCTAGGGTTCAGTCAATCACCAGTGGAGTTTATTAATGCCTTAATTGAGTCTCAGAGCCGGGATTTGAAATTAGTATCCGGAGAAGCTAGCCGAAGTGCTGAAAGAGAGCGGAGATCAGATTTCTTCAACCAACCATGGGTTGAAGATGCTGTTATCCGTTATCTGAATCGCAAGCCAGCTGCGGGAAGTGATGCTCCAGGAAGCATGTGA
Copy
>CCACVL1_10246
MSVNNNNPPKNLGPSSSPFGNAGMVPPSMTGNPAFSQAQAQAQAQLNAGFQHQFQLSQAQALAQAQSKAHAQAQVAHAQLQAHLQAQGLALNQAQNAGIGNLGSSSPSMSTPGSASAKRILQKPPVRPPGVPMTNTMSPLRTMDLTPAARRKKQKLPEKQMQERVAAILPESALYTQLLEFEARVDAALARKKVDIQEALKNPPCVQKTLRIYVFNTFANQIKTIPKKPNAEPPVWTLKIIGRILEDGVDPDQPAFVQKTNPLYPKFSSFFKRVTISLDQRLYPDNHIIIWEHARSPAPHEGFEVKRKGDKEFTVNIRLEMNYTPEKFKLSSALMEVLGIEVDTRPRIIAAIWHYVKARKLQNPNDPSYFNCDPQLQKVFGEEKVKFTMVSQKISQHLTAPPPIHLEHKIKLSGNCPAGTACYDVLVDVPFPIQRELSALLANAEKSKEIEACDEAICAAIRKIHEHRRRRAFFLGFSQSPVEFINALIESQSRDLKLVSGEASRSAERERRSDFFNQPWVEDAVIRYLNRKPAAGSDAPGSM