Information report for Cav03g02390
Gene Details
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Functional Annotation
- Relative of Early Flowering 6 (REF6) encodes a Jumonji N/C and zinc finger domain-containing protein that acts as a positive regulator of flowering in an FLC-dependent pathway. REF6 mutants have hyperacetylation of histone H4 at the FLC locus. REF6 interacts with BES1 in a Y2H assay and in vitro. REF6 may play a role in brassinoteroid signaling by affecting histone methylation in the promoters of BR-responsive genes. It is most closely related to the JHDM3 subfamily of JmjN/C proteins.
Homologous
- Gossypium arboreum: Cotton_A_18629_BGI-A2_v1.0
- Juglans regia: Jr02_01930, WALNUT_00020075-RA, Jr09_04290
- Malus domestica: MDP0000298212, MDP0000152443
- Populus trichocarpa: Potri.015G089000.1, POPTR_015G089000v3, Potri.012G092400.1, POPTR_012G092400v3
- Prunus avium: Pav_sc0000522.1_g100.1.mk
- Prunus mume: XP_008239384.1
- Prunus persica: Prupe.5G159200.1.p, PRUPE_5G159200
- Rosa chinensis: RchiOBHm_Chr7g0191461
- Ziziphus jujuba: XP_015882347.1
Sequences
CDS Sequence
- >Cav03g02390
ATGGCAGATCAAAGTCATGAAGGGGTTTCTAATGCTGAATCACAGAGAGACACTACTGCTCTTGGCCTATTAGCTTCGACTTATGGAAATTCATCTGACTCTGAGGAGGATCAGGGTGAACCAGATTTTCCTACATGCGCTGATGAAACTAAGTTGATAAATTGTTCGTCAGAAAGTATATATCAACGTGATAATTCTGGTTCGCCTCCCATGCAAGACTGCCCCCATAATGCAACTGGGGTTCTCAAGAATGGAAGTCGAGCTTCTGACTGCTCTGTTGAGTTTAGAACTGATGATCGTACTTCCTTAAAGTCAAATGGATTGGAGGGCATATTAAGTGATCCAATGACAGTATCCCATATTAGTTCAGATTGTTCTCCAGATGCCCATGATGCTGAGAAAACGAAGTTTGGCAAGGCAATTGTACCAATAGAGAACCCCAATATGTCATTGGCTCCAAGATCTGATGAAGACTCTTCTAGAATGCATGTCTTCTGTCTTGAGCATGCCATAGAAGTAGAGCAGCAACTTCGTCCAATAGGAGGAGTGCATATACTGCTCCTTTGTCATCCAGATTATCCCAAGATAGAGGCTGAAGCAAAGTTGTTGGCAGAAGAACTTGGAATTGATTATCTCTGGAATGATATCACATTCAGAAGTGCCACCAAAGAGGATGAGGACGGGATCCGGTCAGCTCTGGATAGCCAGGAAGCAATTCCTGGCAATGGGGATTGGGCTGTAAAGCTTGGAATCAATCTCTTTTACAGTGCCAACCTTAGCCGCTCTACTCTTTACAGTAAGCAGATGCCTTACAATTTTGTTATTTATAATGCATTTGGCCGTAGTTCTCCGGCTAGCTCGCCTAGAAAAGCTAGTGTCTACGGGAGGAGGTCAGGCAGGCAGAAAAAAGTAGTGGCAGGGAAATGGTGTGGGAAAGTCTGGATGTCACATCAGGTTCATCCCTTTTTGGCAAAAGGGGATCCCGATGATGATGAAGAAGACAGAAGCATCCAAACTTGGACAATGCCGGATGTGAAGCTTGAGAGAAAAACAGAAAGCACAGCAGTTAAAAGTGAAGCCCCCACGGTTATCAGAAAATATCGTAGGAAGAGAAAGATGACAGTAGAAAGTGGGTCTACCAAAAAAGCCAAATGTATTGATAGAGAAGATGCAGTTTCAGATTATTCTGTGGAAGATAATTCTAATCGGCAGCATAGCAGGACCCTAGGCAAACCAGCCAAATCTATAGATAGGGACCATGCAGTTTCAGATGATTCATCGGAGAATAATTCTCATCAGCTACATTGGAGGACTTCTAAAAGCAAGGAAGCCTTTTTTGATGAGAGAGAAGATGCAGTTTCAGATGATTCAATGGAGGATAATTCTCATCTGCGGCATAGGAGGATTCTTAGGGGCAAGCAACCCAAATATTTAGAGAGAGAAGATGCAAAATCAGACGGTTCACCAGGGAATAATTCTCATCAGCATAATAGGAGGATTGCTAAAAGCAAGATTGGGAGAGAAGCATCTTCTGATGATTCACTGGAGGATAATTCTCATCAGCAGATTAGGAGAGTTCCTAGAAGGAATCAAGCCAAATGCATTGAGAGAGAAGATGCAGTTTCAGATGATTCACTTGGGGACAATTCACATCAGCAGCACCGGAGGCTTCCTAAAATCAAGCAAGCCAAAGCCATTGAGAGAGAAGATGCAGTTTCAGATGATTCCCTTGGGGATAATTCACATCAGCAGCACCAGAGGCTTCCTAAAATCAAGCAAGCCAAAGGCATTGAGAGAGAAGATGCAGTTTCGAATATTTCACTGGATGATAATTCTCATCATCAGCATAGGAGGATTCTTCGGAGTAAGAGAATGAAACCAGAGACCCGTCAGCAAATGAAGAAAGAGACCACTCGGCATGTGAAACACGGGACCTCTCAGGCTGCAAAACAGGTGACCCGTCAGGTTATGAAAAAAGAGACCCCTCAACAAATTAAACAACGAACTCCTCGGCTTCGGAATAATCAATCTGAACAGAATGCTGGCCGGTTTGGCTTGTATGTCGAAGAGGACCCGGAAGGTGGACCTAGCACACGCCTTAGGAAGAGAATCCCAAAGCCCCCAAAAGAGCCTGAAGCCAAACCAAAAGAGAAGCAGCAAACTAGTAGGAAAAAAGTGAAGAAGAATGCTTCTGCTGTGAAGGCTTCAGCTGGACACTATTATCCAAAAGTGGCGGATGAGGAAGTAGAATTCCTGTGTGATGTTGAGGGCTGCACCATGAGTTTTGGCTCAAAACAAGAGCTCGCCTTGCATAAAAGAAATATCTGTCCAGTCAAGGGCTGTGGGAAAAAGTTCTTCTCGCATAAATATCTGGTGCAGCACCGGCGAGTTCATCTGGATGACCGTCCTCTTAAGTGCCCTTGGAAGGGCTGCAAGATGACATTCAAGTGGGCATGGGCTCGAACTGAACACATTAGGGTTCACACAGGTGCTCGTCCTTATGTGTGCGCCGAGCCAGGCTGTGGGCAGACATTCCGGTTTGTGTCAGATTTCAGTCGCCACAAGCGGAAGACTGGTCATTCAGCAAAGAAGGGAAGGGGATAA
Protein Sequence
- >Cav03g02390
MADQSHEGVSNAESQRDTTALGLLASTYGNSSDSEEDQGEPDFPTCADETKLINCSSESIYQRDNSGSPPMQDCPHNATGVLKNGSRASDCSVEFRTDDRTSLKSNGLEGILSDPMTVSHISSDCSPDAHDAEKTKFGKAIVPIENPNMSLAPRSDEDSSRMHVFCLEHAIEVEQQLRPIGGVHILLLCHPDYPKIEAEAKLLAEELGIDYLWNDITFRSATKEDEDGIRSALDSQEAIPGNGDWAVKLGINLFYSANLSRSTLYSKQMPYNFVIYNAFGRSSPASSPRKASVYGRRSGRQKKVVAGKWCGKVWMSHQVHPFLAKGDPDDDEEDRSIQTWTMPDVKLERKTESTAVKSEAPTVIRKYRRKRKMTVESGSTKKAKCIDREDAVSDYSVEDNSNRQHSRTLGKPAKSIDRDHAVSDDSSENNSHQLHWRTSKSKEAFFDEREDAVSDDSMEDNSHLRHRRILRGKQPKYLEREDAKSDGSPGNNSHQHNRRIAKSKIGREASSDDSLEDNSHQQIRRVPRRNQAKCIEREDAVSDDSLGDNSHQQHRRLPKIKQAKAIEREDAVSDDSLGDNSHQQHQRLPKIKQAKGIEREDAVSNISLDDNSHHQHRRILRSKRMKPETRQQMKKETTRHVKHGTSQAAKQVTRQVMKKETPQQIKQRTPRLRNNQSEQNAGRFGLYVEEDPEGGPSTRLRKRIPKPPKEPEAKPKEKQQTSRKKVKKNASAVKASAGHYYPKVADEEVEFLCDVEGCTMSFGSKQELALHKRNICPVKGCGKKFFSHKYLVQHRRVHLDDRPLKCPWKGCKMTFKWAWARTEHIRVHTGARPYVCAEPGCGQTFRFVSDFSRHKRKTGHSAKKGRG