Information report for C5167_034972
Gene Details
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Functional Annotation
- Pseudo response regulator involved in the generation of circadian rhythms. TOC1 appears to shorten the period of circumnutation speed. TOC1 contributes to the plant fitness (carbon fixation, biomass) by influencing the circadian clock period. PRR3 may increase the stability of TOC1 by preventing interactions between TOC1 and the F-box protein ZTL. Expression of TOC1 is correlated with rhythmic changes in chromatin organization.
Homologous
- Actinidia chinensis: CEY00_Acc26685, CEY00_Acc21923
- Beta vulgaris: BVRB_5g114270
- Glycine max: Glyma.04G166300
- Gossypium hirsutum: Gohir.A03G067700, Gohir.D03G094200
- Juglans regia: Jr02_06070
- Manihot esculenta: MANES_14G081500
- Medicago truncatula: Medtr4g108880
- Nicotiana attenuata: A4A49_15373
- Prunus avium: Pav_sc0000877.1_g1180.1.mk
- Rosa chinensis: RchiOBHm_Chr7g0182001
- Solanum lycopersicum: Solyc03g115770.3
- Solanum tuberosum: PGSC0003DMG400019518, PGSC0003DMG400033048
- Vitis vinifera: VIT_17s0000g06570
Gene Resources
- Pfam: PF06203 PF00072
- UniProt: A0A4Y7KHJ1
- EMBL: CM010721
- AlphaFoldDB: A0A4Y7KHJ1
- OMA: SIEVICN
- InterPro: IPR001789 , IPR010402 , IPR011006 , IPR045279
- PANTHER: PTHR43874 , PTHR43874:SF1
- SUPFAM: SSF52172
- PROSITE: PS50110 , PS51017
- Gene3D: 3.40.50.2300
- STRING: 3469.A0A4Y7KHJ1
Sequences
CDS Sequence
- >C5167_034972
ATGATGAGAGGAGGATCTGCTGCTGGTGGTGGTGGATACAATAAGTTGGATAGAGTTGTTGTTGAGATGGAGAAGAGGAAAGAGGATGCTGTTGGTGGTGGTGGTGGAGGCAATAACAATAATAATAGTAGTATGCCTTTTGTTGATAGAAGTAAAGTGAGAATTTTATTGTGTGACAATAATAATAAAAGCTCTGATGAAGTTTTTACACTTCTCTGCAAATGTTCTTACCAAGTAACATCAGCGAGGACACCCAGACAAGTGATTGATGCACTTAATGCAGAGGGTCGTGATATTGATATCATTCTCTCTGAAGTTGACCTTCCCATATCCAAGGGCTTGAAGATGTTGAAGTATATTATGCGCGATAAAGAGCTGCAGCGCATTCCCATTATAATGATGTCTGCCCAAGATGATGTTTCTGTTGTAGTAAAATGTTTAAAACGTGGAGCAGCTGACTATCTTGTGAAGCCATTACGCACAAACGAGTTATTGAACTTGTGGACTCACATGTGGAGAAGAAGGCAGATGCTTGGATTGGTGGAGAAGAATATCTTAAGTTATGACATTGATTTGGCTGTGTCAGACCCAAGCGATCCCAATACCAACAGCCTAACTCTATTCTCGATGACACAGACGATAAGTCTCGCAAGACCAACTATCGGAAAGATGATGGATTTGATGGAACAACCCATTAATTGCTTCTGCCTTAGTTGTATCTTTATGTTCTTGTTATGCTTTCCTTTCCAGTTCATTGCCACGACGTTCGCAGAGTCTCCGCTCAAGAATTCTTCAGAGCTTCAGCTGGATGCGCCAGGGCCTAGTGACCAGCGAAATGGACAAGTTTCAACAATTTTCAAGAAAAGTGGTCTTAAGTTTGGCAAGTCATCAGCCTTCTTTACATATGTCAAAACCGGTGCAACTGCAGACAACCGTTCAGTGGCTGGTTGTATGGACGAAAATGCTTCTAGATCAGTACAGCCAAGCGGCCCTAGCAGGGAATATACATTTCAGACATGTTCCAATAAACAACAAGGAAGTGATATCGGAAGGCAAGAAACCGGAATTTCACTGGAAAACTACTGTGTTAATGAAGTAATTCCTAGCAGAGACAATGTTCCTGGCATCACAAATGTTGGAAGGTTTTACACTCGTCACACTTCGTTAGAAAGACAAAATGAATGGAACACAAAGGAGGGTGGCAGTAGGACTATTGATTTTGGAAGGCAGAATACTCCTTTGACACCATTGAGAAATCAAGATGGCAGGATCTCGAAGGAGGAAGAGCAATCCTCTAAGCTTTTGTTAGCTCCAAGAAATGACGTTCAAGTTAATGTTTCTCGTGGACAGGGGCACCCTCCGTTTCCTTATTATTTGCCAGGAATGATGAATCAAGTCATGATACCTTCACCTGCTCAACTATATCAAGGGAACCTGCAAAATATGTCAAGTAATTGTACTTCAACATTGTCTCCTTGTATTCCTCTCCAGCAACACGCCAATGTACCTGGAATGGCATCCTTTCCGTATTATCCTTTTATGCAACATGGGCAAATGACCACTACACACATGTGGCCGCCAGTTGCAGGTGTGCCTTCAAGCGAAGTAAAACCAACTCAGGTTGAAAGAAGAGAAGCAGCACTGGTAAAGTTTAGACAGAAAAGGAAAGACAAGTGTTTTGATAAGAAGGTCAGGTACATTAACCGGAAGAAACTAGCTGAAAGGAGGCCTCGTGTAAGAGGTCAATTTGTGAGACTAGCAAATAGTATAGAGGTTGATTTGAATGGGCAACCTGCTGTTGATGATTCTGACGGTGATGAAGAAGAGGACGTGGATGAATAG
Protein Sequence
- >C5167_034972
MMRGGSAAGGGGYNKLDRVVVEMEKRKEDAVGGGGGGNNNNNSSMPFVDRSKVRILLCDNNNKSSDEVFTLLCKCSYQVTSARTPRQVIDALNAEGRDIDIILSEVDLPISKGLKMLKYIMRDKELQRIPIIMMSAQDDVSVVVKCLKRGAADYLVKPLRTNELLNLWTHMWRRRQMLGLVEKNILSYDIDLAVSDPSDPNTNSLTLFSMTQTISLARPTIGKMMDLMEQPINCFCLSCIFMFLLCFPFQFIATTFAESPLKNSSELQLDAPGPSDQRNGQVSTIFKKSGLKFGKSSAFFTYVKTGATADNRSVAGCMDENASRSVQPSGPSREYTFQTCSNKQQGSDIGRQETGISLENYCVNEVIPSRDNVPGITNVGRFYTRHTSLERQNEWNTKEGGSRTIDFGRQNTPLTPLRNQDGRISKEEEQSSKLLLAPRNDVQVNVSRGQGHPPFPYYLPGMMNQVMIPSPAQLYQGNLQNMSSNCTSTLSPCIPLQQHANVPGMASFPYYPFMQHGQMTTTHMWPPVAGVPSSEVKPTQVERREAALVKFRQKRKDKCFDKKVRYINRKKLAERRPRVRGQFVRLANSIEVDLNGQPAVDDSDGDEEEDVDE