Information report for C5167_017539
Gene Details
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Functional Annotation
- Encodes a homolog of human Lysine-Specific Demethylase1. Involved in H3K4 methylation of target genes including the flowering time loci FLC and FWA. Located in nucleus. Negatively regulates root elongation. Involved in repression of LRP1 via histone deacetylation.
Homologous
- Actinidia chinensis: CEY00_Acc07494
- Capsicum annuum: T459_25488
- Daucus carota: DCAR_029206
- Glycine max: Glyma.09G185800
- Gossypium hirsutum: Gohir.D05G183500, Gohir.A05G180500
- Juglans regia: Jr11_19040
- Manihot esculenta: MANES_11G098200
- Nicotiana attenuata: A4A49_07894
- Populus trichocarpa: POPTR_002G013100v3
- Prunus avium: Pav_sc0000367.1_g050.1.mk
- Prunus persica: PRUPE_1G356300
- Rosa chinensis: RchiOBHm_Chr6g0304051
Gene Resources
- Pfam: PF01593 PF04433
- UniProt: A0A4Y7INT6
- EMBL: CM010716
- AlphaFoldDB: A0A4Y7INT6
- OMA: SSRGEMF
- InterPro: IPR002937 , IPR007526 , IPR009057 , IPR036188 , IPR036388 , IPR050281
- PANTHER: PTHR10742 , PTHR10742:SF381
- SUPFAM: SSF46689 , SSF51905 , SSF54373
- PROSITE: PS50934
- Gene3D: 1.10.10.10 , 3.50.50.60 , 3.90.660.10
- OrthoDB: A0A4Y7INT6
- STRING: 3469.A0A4Y7INT6
Sequences
CDS Sequence
- >C5167_017539
ATGGAAATCGACCCACCAGATCTACCAATTCAAGATTCTGAAACCCTAATTTCTGAAACCCCCTCTTCTGAAAATCATTCTCCAGACCCACCATCAGAAAACCACATTGAAGACTCAATAGATGATAAAGAGATTACTGAATCACTAATAGACAAGTACATTGAAGATGAAGAAAATGGAAACCCATCACAAGAAACAACTCAAGTTGAAGAAAATTCTGAGAACCCTAATGATGAAAGTGGTGATCCGATACTTCACTTAAAAAAACGTCGAAGAAGAAAGAAACAATTTCCAGAGATGATTCCATCAGCTGCAGCTGTTGAAGGACTACGTGTGTTACGTCCTCATCATAAATCACCATCAAGTGTTTATTATAGTGACAAATTGATGGACGAGATTGTTCATATGCAGATTAATGATTCTAATTCAAAGAATCGTAGACGAAGGATTGCTGATACTGCAAAAGAGGTAGATGTTGAAGCTTTAATTGCTATTTCTGTTGGTTTTCCCGTTGATTGTTTAATGGAAGAAGAGATTGAATCTAATGTAGTTTCAGTATTAGGTGGTATTGAACAAGCTAATTATATTGTTGTTAGAAATCATATATTAGCTAAATGGAGGTCCAATGTTAGTTCTTGGATTACTAAAGAACATGTTTTTGAGTCGATTAGGTCAGAACATAAAAAACTAGTTGATTCTGCTTATAGTTTTCTTCTTCAACATGGTTATATTAATTTCGGATTAGCAGCAGCAATTAAAGATGGGAGGTTGAAACATCTGGGGGCATCAGAAAAGGGGAATGTAGTTGTTGTTGGTGCAGGACTTGCTGGATTAGCTGCTGCGAGGCAGTTGGTATCACTAGGGTTTACAGTTGTGATATTAGAAGGTAGAAATCGTCCAGGAGGACGTGTGAGGACGAAGAAGATGGAGGGAGATGGTGTGGTTGCTGCCGCGGATCTTGGCGGAAGTGTTCTTACTGGAATTAATGGAAACCCTCTTGGTGTTCTGGCTAGACAATTAGGGTATCCTCTTCATAAGGTGCGAGATATTTGTCCGTTGTATTTACCTGATGGAAAAACAGTTGATTCTGAAATGGACTCTAGGGTTGAGGCTTCTTTTAATAAGTTGTTAGACAGGGTTTGTAAACTACGCCAGGCTATGATGGAAGATGTTAAAGATGTGGATGTTTCTTTAGGTACTGCAATTGAAGCTTTTAGACGCGCTCATAAAATAGCCGAGGATTCACAAGAACGAATGCTTTTGGATTGGCATCTTGCTAACTTAGAATATGCTAATGCTTCGTTGTTATCTGATCTTTCAATGGCTTACTGGGATCAGGATGATCCATATGAGATGGGTGGGGATCATTGTTTTATTCCTGGAGGCAACGGAAGATTTGTTCGTGCTCTTGCGGAGGATCTTCCAATCTTTTACGAAAAGACAGTAGAGAGTATTCGATATGGAAGTGATGGAGTAATGGTTATTGCAAATGGGCAGGTATACCGTGCCGACATGGTTTTATGTACAGTACCTTTGGGTGTCCTTAAGAGAGGGTCAGTTGAGTTTGTTCCTGAGCTTCCACAGCCGAAGAAAGAAGCAATTCAGAGACTAGGTTACGGTTTACTGAATAAGGTTGCAATGTTGTTTCCTTATGATTTTTGGGGTGGCGAAATTGATAGCTTTGGGCATTTGACTAAAGACTCGAGTATGCGAGGGGAGTTTTTTCTGTTCTATAGCTATTCATCTGTTTCGGGAGGGCCACTTTTGGTAGCTTTAGTTGCAGGTGAATCTGCTACCAAATTTGAAACACTGTCTCCTGTTGATGCAGTGGGTAGGGTTTTAAATATACTGAAAGGGATTTTTGCTCCGAAAGGGATTATAGTTCCTAATCCAGTTCAAGTAATTTGTACTCGTTGGGGTAATGATAGGTTTTCGCATGGCTCTTACTCATATGTTTCAACTGGGGCTTCTGGGGATGATTATGATGTTCTTGCAGAGAGTGTTGGGGACGGTAGAGTATTTTTTGCTGGTGAGGCGACTAATAAAAGGTATCCAGCAACGATGCATGGAGCTTTCCTCAGTGGATTAAGAGAGGCTGCTAATATATTGAGAGTGGCTAACAGAAGGTCAGCAGTTCCTTCTGAGAAAACAGAAAATGTTGCACCAAAAAAGGAGGAGGTGAGAGAGGAATGTGATGATTTGGATGTTCTGTTTAATACTCCTGATTTGTTGTTTGGTAGTTTTGCGATTCTGTTTGATCCTAGATCAGGTGATCTTGATTCTTTGGCACTGTTGCGAGTGGGGTTCGGTGGGGAGAAATTGTTATCTAAGTCGCTATTTCTATATGGCTTGATTCCAAGGAAACATGTCATGGAGCTAAACGAGGTGGATGGAGATGGAAATAGGGTCAGGATGTTAAATCAGAGATTTGGGGTTAGATTGCTTGGAAGGAAAAATTTAGGCAATACTGGAGAATCTCTTATTGCATGCATAAAATCTGTTAGGATGAATGTGAACCTCAATGCGGAAAAAGCGTAG
Protein Sequence
- >C5167_017539
MEIDPPDLPIQDSETLISETPSSENHSPDPPSENHIEDSIDDKEITESLIDKYIEDEENGNPSQETTQVEENSENPNDESGDPILHLKKRRRRKKQFPEMIPSAAAVEGLRVLRPHHKSPSSVYYSDKLMDEIVHMQINDSNSKNRRRRIADTAKEVDVEALIAISVGFPVDCLMEEEIESNVVSVLGGIEQANYIVVRNHILAKWRSNVSSWITKEHVFESIRSEHKKLVDSAYSFLLQHGYINFGLAAAIKDGRLKHLGASEKGNVVVVGAGLAGLAAARQLVSLGFTVVILEGRNRPGGRVRTKKMEGDGVVAAADLGGSVLTGINGNPLGVLARQLGYPLHKVRDICPLYLPDGKTVDSEMDSRVEASFNKLLDRVCKLRQAMMEDVKDVDVSLGTAIEAFRRAHKIAEDSQERMLLDWHLANLEYANASLLSDLSMAYWDQDDPYEMGGDHCFIPGGNGRFVRALAEDLPIFYEKTVESIRYGSDGVMVIANGQVYRADMVLCTVPLGVLKRGSVEFVPELPQPKKEAIQRLGYGLLNKVAMLFPYDFWGGEIDSFGHLTKDSSMRGEFFLFYSYSSVSGGPLLVALVAGESATKFETLSPVDAVGRVLNILKGIFAPKGIIVPNPVQVICTRWGNDRFSHGSYSYVSTGASGDDYDVLAESVGDGRVFFAGEATNKRYPATMHGAFLSGLREAANILRVANRRSAVPSEKTENVAPKKEEVREECDDLDVLFNTPDLLFGSFAILFDPRSGDLDSLALLRVGFGGEKLLSKSLFLYGLIPRKHVMELNEVDGDGNRVRMLNQRFGVRLLGRKNLGNTGESLIACIKSVRMNVNLNAEKA