Information report for C5167_009460
Gene Details
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Functional Annotation
- Represses photomorphogenesis and induces skotomorphogenesis in the dark. Contains a ring finger zinc-binding motif, a coiled-coil domain, and several WD-40 repeats, similar to G-beta proteins. The C-terminus has homology to TAFII80, a subunit of the TFIID component of the RNA polymerase II of Drosophila. Nuclear localization in the dark and cytoplasmic in the light.
Homologous
- Actinidia chinensis: CEY00_Acc09715, CEY00_Acc14947
- Arabidopsis thaliana: AT2G32950
- Brassica napus: BnaA05G0112800ZS
- Daucus carota: DCAR_000480
- Glycine max: GmCOP1b, Glyma.14G049700
- Gossypium hirsutum: Gohir.A11G152500, Gohir.D11G159400
- Manihot esculenta: MANES_12G068900
- Populus trichocarpa: POPTR_014G159300v3
- Vitis vinifera: VIT_10s0523g00030
Gene Resources
- Pfam: PF00400 PF00097
- UniProt: A0A4Y7K1D8
- EMBL: CM010720
- AlphaFoldDB: A0A4Y7K1D8
- OMA: GDYICCG
- InterPro: IPR001680 , IPR001841 , IPR013083 , IPR015943 , IPR017907 , IPR019775 , IPR036322 , IPR042755
- PANTHER: PTHR44080 , PTHR44080:SF1
- SUPFAM: SSF50978 , SSF57850
- PROSITE: PS00518 , PS00678 , PS50082 , PS50089 , PS50294
- Gene3D: 2.130.10.10 , 3.30.40.10
- CDD: cd16504
- STRING: 3469.A0A4Y7K1D8
Sequences
CDS Sequence
- >C5167_009460
ATGGGCGGGGGATCAATGGGGGCACTAGTACCATCTGTGAAAAGTGAAGGTAAATCAGAAGCAGTTGGAGCTTCATCAGAAGCTGTAGGTGCTGCTTCAACAGCTATGGTTGAAGTGGGGAAACAAAATGAAGAAGTAGAAGAAGAAGGTGGGAGAGGAAGAGGAGGAGGAGAAATGGATAAAGATTTGTTATGCCCAATATGCATGCAGATAATTAAAGATGCATTTCTCACAGCTTGTGGACATAGTTTTTGTTATATGTGTATCATTACTCATCTTAATAACAAAAATGATTGTCCTTGTTGTGGTCATTACTTAACCAATAATCAACTCTTCCCCAATTTTCTTCTCAATAAGCTTTTGAAGAAAACCACTGCTCGCCAAATAGGAAAAAATGCATCTCCACTAGAGCACCTTCGACAGTCATTGCAACATACTCTTAATGTGACACATTTCATGCATGCACGTAGACAGGGTTACGAGGTTTCAGTGAAGGAGCTAGATAGCCTATTATCACTCCTTTCAGAGAAAAAGAGAAGAATGGAACAAGAGGAAGCTGAAACAAATATGAAGGTTCTGCTTGACTTCTTGCACTGCTTAAGGAAGCAAAAGGTCGAAGAATTAACTGAGTTACAAACTGATATTCAGTACATTAAAGAGGACATAAATTTAGTCGAGAGACAGAGAATGGACTTATACCGAACAAGGGAGAGATACTCGGTAAAAATGCGGATGCATATGGATGATCATGCTGCAGCAAAAGCGCGACCATTGTCGATTGATAAGCAAAGTAGTGGGCTTGTTTCCAGTGGTCGTACAACTCAATCAGGATTAGGGTTTGGCAGTTTGGTAAATAGGAAAGCTGACCCAAAGCCTCAAGAGAGCTCCCAAGGTTACCAAAAAAAGGAGGCAATGGGCGGATCAGATCCACCAAGCGTTTCTCATTCTGGCTTGGCTATGGCAAGAAAGAGGCGAATCCATGCTCAGTTTAACGATTTACAAGAATGTTACTTACAAAAAAGGAGGCAATGGGTCAGTCAAACTCGTAACCAGCAAGAGAGGAGCATATATACATCAAAAAGGGAAGGTTACCATGCCGCCCTTGAGGACTTTCAGTCTGTTCTGACTACCTTTACACGATACAGTCGTTTGAGGGTAATTGCGGAGCTTAGGCATGGAGATTTATTCCACTCGGCTAATATTGTATCAAGTATAGAATTTGATCGGGATGATGAGTTGTTTGCAACTGCCGGAGTTTCTCGACGCATCAAAGTTTTTGAATTTGCTTCGGTAGTTAATGAACCTGCAGATGTGCACTGCCCAGTTGTGGAAATGTCTACCAGATCCAAACTAAGTTGCCTGAGCTGGAACAAATTCACTAAAAACCACATAGCAAGTAGCGATTACGAAGGAATAGTTACTGTTTGGGATGTAAATACTCGTCAGAGTGTAATGGAATACGAGGAACACGAAAAACGAGCATGGAGTGTTGATTTTTCGCGTACAGAGCCTTCAATGCTTGTGTCTGGTAGTGATGATTGCAAGGTTAAAGTTTGGTGTACCAACCAAGAAGCTAGTGTACTGAATATCGACATGAAAGCTAATATTTGTTGCGTCAAATATAATCCTGGTTCAAGCTACCATGTGGCGGTTGGTTCAGCTGATCATCAAATTCATTATTATGACTTGAGAAATGTCAGTGCCCCACTACATGTTTTCAGTGGCCATAGAAAAGCTGTTTCTTATGTAAAATTCTTGTCTAACAACGAACTGGCGTCAGCATCTACTGACAGTACATTACGATTGTGGGATGTAAAGGAAAATGTGCCGGTGCGTACATTTAGAGGCCACACTAATGAGAAGAACTTCGTGGGTCTAACAGTAAATAGTGAATATATAGCTTGTGGAAGTGAAACGAATGAAGTTTTTGTTTATCACAAGGCTATCTCAAAACCTGCCGCCGGGTATAAGTTTGGTTCATCTGAATTAGATGATACCGATGATGATGCAGGGTCTTACTTCATAAGTGCTGTTTGTTGGAAGAGCGACAGTCCAACAATGTTAACTGCCAATAGTCAAGGAACTATCAAAGTGCTAGTTCTTGCTGCTTAA
Protein Sequence
- >C5167_009460
MGGGSMGALVPSVKSEGKSEAVGASSEAVGAASTAMVEVGKQNEEVEEEGGRGRGGGEMDKDLLCPICMQIIKDAFLTACGHSFCYMCIITHLNNKNDCPCCGHYLTNNQLFPNFLLNKLLKKTTARQIGKNASPLEHLRQSLQHTLNVTHFMHARRQGYEVSVKELDSLLSLLSEKKRRMEQEEAETNMKVLLDFLHCLRKQKVEELTELQTDIQYIKEDINLVERQRMDLYRTRERYSVKMRMHMDDHAAAKARPLSIDKQSSGLVSSGRTTQSGLGFGSLVNRKADPKPQESSQGYQKKEAMGGSDPPSVSHSGLAMARKRRIHAQFNDLQECYLQKRRQWVSQTRNQQERSIYTSKREGYHAALEDFQSVLTTFTRYSRLRVIAELRHGDLFHSANIVSSIEFDRDDELFATAGVSRRIKVFEFASVVNEPADVHCPVVEMSTRSKLSCLSWNKFTKNHIASSDYEGIVTVWDVNTRQSVMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKVKVWCTNQEASVLNIDMKANICCVKYNPGSSYHVAVGSADHQIHYYDLRNVSAPLHVFSGHRKAVSYVKFLSNNELASASTDSTLRLWDVKENVPVRTFRGHTNEKNFVGLTVNSEYIACGSETNEVFVYHKAISKPAAGYKFGSSELDDTDDDAGSYFISAVCWKSDSPTMLTANSQGTIKVLVLAA