Information report for C5167_009153
Gene Details
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Functional Annotation
- Encodes a homolog of human Lysine-Specific Demethylase1. Involved in H3K4 methylation of target genes including the flowering loci FLC and FWA.
Homologous
- Arabidopsis thaliana — AT3G13682
Gene Resources
- Pfam: PF01593 PF04433
- UniProt: A0A4Y7JZH5
- EMBL: CM010720
- AlphaFoldDB: A0A4Y7JZH5
- OMA: PYVFWGE
- InterPro: IPR002937 , IPR007526 , IPR009057 , IPR036188 , IPR036388 , IPR050281
- PANTHER: PTHR10742 , PTHR10742:SF373
- SUPFAM: SSF46689 , SSF51905 , SSF54373
- PROSITE: PS50934
- Gene3D: 1.10.10.10 , 3.50.50.60 , 3.90.660.10
- OrthoDB: A0A4Y7JZH5
- STRING: 3469.A0A4Y7JZH5
Sequences
CDS Sequence
- >C5167_009153
ATGATGGCTGCTTCAGTTTGCGATGGTAGTGTATCTAATAAGCGTCCGACGAGAAGAACTGTAGGATCCAAAAACTACGATGAAAAACGTATGGATGAGTTAATAGAAAACCATATAGGTAGTACGCCTAGGAAACGGAATAAGACGATGAAACAAATGGAGAAAGAAACGGAAACCGAAGCTATGGTTGCTTTATCTTTAGGGTTTCCTATTGATGAATTGCTCGAAGAGGAAATTGAAGCTGGGGTTGTCAGTGAATTAGAGGGAAAAGAACAAAATGATTATATTGTGGTTAGAAACCATATATTGGTTAAGTGGAGGGATAACGTTCAGGTTTGGCTTACGAAAGGAGAAATCAGAGAAACTGTTAGTAATGAGTACGGGAAATTGATTAATTCAGCTTACGATTTTCTCTTGCTTAATGGATATATTAACTTTGGGGTTTCACCTTCTATTGCGTCCAACATTCCAGAGGCAAGTATTGGATCTGTGATTATTGTTGGTTCTGGATTGTCTGGATTAGCTGCAGCTAGGCAGCTTTTAGCTTTCGGTTTCAAGGTTGTTGTTCTTGAAGGTAGAAAGAGGCCTGGTGGCAGAGTGTATACTGAAAAAATGGGATTAAAGGATAATTTTGCAGCGGTTGATCTAGGTGGTAGTGTTATTACAGGTGTGCACGCCAACCCTCTTGGAGTTCTGTCAAGGCAATTGTCTGTGCCACTTCACAAGGTCAGAGATAAGTGTCCTTTATACAAGTCTGACGGATCCTCTATTGATGAGGCGATAGATTCCAAGGTGGAGAACGTGTTCAATAAGTTACTCGATAAAGCCACTGAATCGAGAAATATCATGGGTGAATCTGCTAATGATATTTCTCTGGGATCTGCCTTGGAGACAATCAGAGAGTTGTATGGTGCAATTCAAAGTCCTGAAGAAAGACAACTTCTTGATTGGCATCTAGCAAACTTGGAATATGCAAATGCTGGATGTCTTTCAGATCTTTCATTTGCCTACTGGGATCAGGACGATCCTTATGAAATGGGTGGGGATCACTGTTTCCTTCCTGGAGGTAATAGAGTTCTGGTTAAGGCGCTGTGTGAGAAAATCCCTATCTGCTATGAAAAGACTGTTCACACTATTCGGTACGGTAATGAAGGTGTTGAGGTGGTAGCTGGCGATCAAGTATTTCAAGCAGATATGGTCCTTTGTACAGTGCCACTTGGGGTCTTGAAGAAAAGAACCATCAAATTTGAACCAGAGTTACCCCAAAGAAAACTCGATGCTATTGGCAGGCTGGGTTTTGGTTTGCTAAATAAGGTTGCCATGGTTTTCCCTCATGTGTTTTGGGGGGAAGATCTTGACACATTTGGTTATCTTAATGAAGATACTCGTCGACGCGGGGAATTCTTTTTGTTCTACAGCTACCATACAGTTTCTGGTGGTCCACTTCTCATTGCTTTGGTTGCAGGAGAATCTGCATATACCTTTGAATCCACAAATCCGTCTGTTCTTCTTCACCGTGTTATGAGCATCCTGAGAGGTATCTTTTCTCCAAAGGGCATTGATGTGCCAAATCCAATCCAAACAATGTGCACCAAATGGGGCAGTGATCCTCTTTGCCTGGGTTCATACTCTCATGTTAGAGTTGGGTCATCTGGCGAGGATTACGATATTCTAGCCGAAAGTGTGGGAGACCGACTATTCTTTGCTGGTGAAGCAACCATTAGGCAGCATCCAGCAACTATGCATGGTGCTTTCTTGAGTGGCTTAAGAGAAGCTGCATGCATTCTGCGTGCCACAAAGACTGATCATATTAAGTGCACTCAGAAGAATGTGGGACCATCCAATGAACTTCTCGTTGATCTGTTTTCAAAGCCTGATCTGGAGTATGGAAATTTCTCATACATTTTTGATCCTTCAGAGAAAGACCCAAAATCTATGGGGATTATGAGAGTTACTATTGGTAAGCCCAATAATCCCCAGCAAGAAGGCGATGTCACTCACCTGTCTGAGAAACTACCATTACCTTTATATAGTATGTTAACTCGAGCACAGGAACAACAAATACAGTTGATGGCTGGTGAAGATGAAAGTAAGTTGAAATCTTTGCACAGGCATTTAGGATTGAAGCTCATGGGACCTTGCGGTTTGGGCAGTTTGGGTAACTCTTTGGCTGGTAGGATTGCTAATGCTCGCAGAGGTCGGGGAAGATATCGACAACCAAAGGTTGTCTAG
Protein Sequence
- >C5167_009153
MMAASVCDGSVSNKRPTRRTVGSKNYDEKRMDELIENHIGSTPRKRNKTMKQMEKETETEAMVALSLGFPIDELLEEEIEAGVVSELEGKEQNDYIVVRNHILVKWRDNVQVWLTKGEIRETVSNEYGKLINSAYDFLLLNGYINFGVSPSIASNIPEASIGSVIIVGSGLSGLAAARQLLAFGFKVVVLEGRKRPGGRVYTEKMGLKDNFAAVDLGGSVITGVHANPLGVLSRQLSVPLHKVRDKCPLYKSDGSSIDEAIDSKVENVFNKLLDKATESRNIMGESANDISLGSALETIRELYGAIQSPEERQLLDWHLANLEYANAGCLSDLSFAYWDQDDPYEMGGDHCFLPGGNRVLVKALCEKIPICYEKTVHTIRYGNEGVEVVAGDQVFQADMVLCTVPLGVLKKRTIKFEPELPQRKLDAIGRLGFGLLNKVAMVFPHVFWGEDLDTFGYLNEDTRRRGEFFLFYSYHTVSGGPLLIALVAGESAYTFESTNPSVLLHRVMSILRGIFSPKGIDVPNPIQTMCTKWGSDPLCLGSYSHVRVGSSGEDYDILAESVGDRLFFAGEATIRQHPATMHGAFLSGLREAACILRATKTDHIKCTQKNVGPSNELLVDLFSKPDLEYGNFSYIFDPSEKDPKSMGIMRVTIGKPNNPQQEGDVTHLSEKLPLPLYSMLTRAQEQQIQLMAGEDESKLKSLHRHLGLKLMGPCGLGSLGNSLAGRIANARRGRGRYRQPKVV