Information report for C5167_003402
Gene Details
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Functional Annotation
- Encodes one of two orthologous E3 ubiquitin ligases in Arabidopsis that are involved in monoubiquitination of histone H2B.
Homologous
- Arabidopsis thaliana — AT1G55250
- Oryza sativa — LOC_Os10g41590
Gene Resources
- Pfam: PF00097 PF02886 PF12678 PF13639 PF13920 PF13923 PF14447 PF14634 PF14835 PF15227 PF17121 PF18912
- UniProt: A0A4Y7L3H5
- EMBL: CM010723
- AlphaFoldDB: A0A4Y7L3H5
- OMA: YSNIDTR
- InterPro: IPR013956
- PANTHER: PTHR23163 , PTHR23163:SF8
- STRING: 3469.A0A4Y7L3H5
Sequences
CDS Sequence
- >C5167_003402
ATGGAGAACTCTGACGCTGAAGAGCCTGATAAGAAAAGGCGTCATATTGACTCTGTTGCATCCGCCATGGCTTGGAGCTCACCTACTTCACCTGATGAAAGAACCATTGATGCAGCCGCTCTTCAATGTGAGAATCAGAAGCTCATACAGCAGTTAGATTCCCACAAACACGAGTTGCATGCTCTAGAAGGGAAATTCAAAAATTTAAAAGAGAAGCAAACATCTTATGATGATAAATTGATTATAGTTAACAGACATTGGAATCAGTTAGTTGACAATTTAGTTTTGCTTGGAGTTCGAGCTTGTCGTATTCATGATGGTTTAAAAGCTTTAGATCACGCAGAACAAACGAAAGGTTCAGCTGCATCATGTCCTTCAGAGGATAAATTTCTTTATATACTTCTAGAATCAGGCCCAACTGAACATAGTGGAGGTATTGGAATTACAAAATATGTCCAAGAAGCACTTTTGGTACGGCGTTCATCTACTATGAGTTTGATGAAGTACCTAGAAGATACTATTAATTATCAGAGAGCTCAAACAGAGGCTTTAGAATTATCCCTATCTGGAAGCCTTTCTGAAGAAGATGCTATTGTCCAGCAGCATAAGCTTGATGATTTAATGAGAGAAGAGATCAAAACACTGAGTGAGGCAATTGACTTTCTCAACTTGAAGCATAAAGAGTATGCTGATGAGATACAAACATATATTACAAGTCATTCGACGGATCAGTTGGAAATAAAACGCATTGCAGGCGAGCTGGATGAAAGCTTGGCAGAAGTTGAGGAGAGTAGAAGGAAGTTAATCAATATGAAAATTCAAACTAGTGGTTCATCTGGATTGCATGTTCCGGTCATGCTAACTGGAAATGGAAGTGCGTCACCTGAACAGTCTTCAGATAAGACTCTAGGGCTCAAAGAATTGAAATCGAGAATTGAGGAAGTTAAGGAGCTTGCAGCTACCCGTCTTTCAGAGCTCCAGGAGGCACAGGAAGATAATTTAACACTGTCCAAACAATTGCAAGATCTTGAGAATGAACTGAAGGATGACAAATTCGTACTTTTATCTAGACCGTACCATTTATTGAATGATTGGCTCGTACATTGTAATGCTGAAGTGGATCGCTACAAAGGATTAATAGATTCATTCCAGTCTGACAGGAATTATATGTCGCGGAGAGAGAAAGAATTAAGTGCAAAAGCAGAGTCGGCTGACGCTACAAGAACTGCAGTTAGCAAATCTGAGACCAAGATTGAAGAGTTACAGATTCAGCTGCAGAAGTGTATTATAGAAAGAAATGATATTGAAATAAAGTTGGAAGAAGCAGAACAGGATTCAGGTAAAAAGGACATAAAAGACGAGTTTCGGGTAATGGCATCAGCTTTGTCCAAAGAAATGGATATGATGGAAGCCCAGTTGAACAGGTGGAAGGACACAGCTCATGAAGCTCTATCTCTCCGTGAAGAAGCATATTCACTGAAAGCTTTACTGAGTGCAAAGACGGCTGAACACGAGAGCTTATCAGAAAGCTGTGCCGAACAAATGGCAGAGATCAAGTCCCTTAAAGCATTGATTGAGAATTTGCAGAAGGAGAAACAGGAATTGCAGATCTTCTTGGATATGCATGGACAGGAATGTTTTGACAAAAGAGACCTGCTGGAAATAAAAGAAACAGAACGTCGAGCTCGTGCGCAAGCTGAAGTCTTGAAGAATGCTCTAGATGAACATAGTCTAGAACTACGGGTGAAAGCTGCAAATGAAGCCGAGTCTGCTTGCCAGCAAAGGTTGTCTGTTGCCGAATCTGAGATTTTAGATTTAAGAGCTAAACTGGATGTTTCCCAAAGAGAGGTTTTGGAACTTACAGAGGCCATAAAAATTAAGGACAGTGAAGCAGAAGCTTATATTGCTGAAATTGAGACCATTGGTCAAGCATATGAAGATATGCAAACACAGCACCAACATTTGGTGCAGCAGGTCGCTGAAAAAGATGATTACAATATCAAGGCACGTTTCTTATTTATCTCAACCTGTTTATACCCTAAATATCTGGTTTGCTTTATGGTTATCCTGAGGAGTCCTATCTTGAATGCGATCCAGCTTGTTTCTGAGAGTGTGAAGCTGAAGCAAGCGCAAAGTTTTCTTCTTTATGAGAAGCAAGCATTAGCAAAGAAACTCCAGCAGGTTCATGCATCAATAGAATCATCCAAACAGAAGATATCCCGTAGTGAAGATCAGATGAAATCCTATCTGACTGAAGCTGGAAAAGCTTGTTCAGAGCACAGACACCTTATCACTACCGTAGATACTTCAAAATGGGAATTGGCAGATGCTGAAAAAGAATTAAAGTGGCTGAGGGGTGCCATTTCCTCATCAGAAAAGGAATTTGAGCAAAACCAACGGAAGGTGACAGAGCTCCAGAGAGATTTAGACAGAGAAAGGATTCAGAGGAAGAAACTTGATGAAGACCTGCGTGAGGTCAATAATAAGGTTTCGGAGATGAGCTTGGAGAGAAGAGAGGCTGCAATACAGATACTCCAAGATGAGATCAAGGATTGCAAGGCGATTCTCAAGTGTGGTGTATGTTCTGATCGGCCAAAGGAGAGATCATCTTGCATTTCCATTACAACTGCTACTACTAATAGAAGAAAAAATGGAAAACTAAGTGCTTCTTTGCTAGAGGCTCCTGTTATATGGGCTGGTAGAGTATGCATCTTTTATGTTCTACTCAAAGCTGGTTATGCTGGATCACCAGATAGTCCTTTTCTTTCAGATGTGAAAACAGGAAATAATGATTTGGGTTTCTCTGAGTGGTTAGGAAGCTTTCAAGGAAGATCAGAAGAGGAAAAAGAAGCAAATGACAAAAGGAAATTGGTGAGCAAATGGCACCCAACCACAAAGGGTACTCTCAAAAGGAGTTATAGAGTACCTTCCAAAACTGTCGGAAAAAAGTTGCTCAAGGCCATTGCGTCTTTACTATCAGATGATGATCACTTCTTAGATGCTTCGTCCCATAAGGGTTGTCAGATCAGAAGGGAGAGTGCTCATGGGGAGAGTGTGTGCTGTAACAATGTGAGAGCTTTATTTGATGAACTTCCAACTCCACATTTGATTGTCGAGATAACACCTTTTCCTGCCGGACCTCTTACTGAGAAAGATTATATCAAGGCTGAGAAGCTTGAGAAAGTGTTGAGATCCGCTGCTTCGATTTGA
Protein Sequence
- >C5167_003402
MENSDAEEPDKKRRHIDSVASAMAWSSPTSPDERTIDAAALQCENQKLIQQLDSHKHELHALEGKFKNLKEKQTSYDDKLIIVNRHWNQLVDNLVLLGVRACRIHDGLKALDHAEQTKGSAASCPSEDKFLYILLESGPTEHSGGIGITKYVQEALLVRRSSTMSLMKYLEDTINYQRAQTEALELSLSGSLSEEDAIVQQHKLDDLMREEIKTLSEAIDFLNLKHKEYADEIQTYITSHSTDQLEIKRIAGELDESLAEVEESRRKLINMKIQTSGSSGLHVPVMLTGNGSASPEQSSDKTLGLKELKSRIEEVKELAATRLSELQEAQEDNLTLSKQLQDLENELKDDKFVLLSRPYHLLNDWLVHCNAEVDRYKGLIDSFQSDRNYMSRREKELSAKAESADATRTAVSKSETKIEELQIQLQKCIIERNDIEIKLEEAEQDSGKKDIKDEFRVMASALSKEMDMMEAQLNRWKDTAHEALSLREEAYSLKALLSAKTAEHESLSESCAEQMAEIKSLKALIENLQKEKQELQIFLDMHGQECFDKRDLLEIKETERRARAQAEVLKNALDEHSLELRVKAANEAESACQQRLSVAESEILDLRAKLDVSQREVLELTEAIKIKDSEAEAYIAEIETIGQAYEDMQTQHQHLVQQVAEKDDYNIKARFLFISTCLYPKYLVCFMVILRSPILNAIQLVSESVKLKQAQSFLLYEKQALAKKLQQVHASIESSKQKISRSEDQMKSYLTEAGKACSEHRHLITTVDTSKWELADAEKELKWLRGAISSSEKEFEQNQRKVTELQRDLDRERIQRKKLDEDLREVNNKVSEMSLERREAAIQILQDEIKDCKAILKCGVCSDRPKERSSCISITTATTNRRKNGKLSASLLEAPVIWAGRVCIFYVLLKAGYAGSPDSPFLSDVKTGNNDLGFSEWLGSFQGRSEEEKEANDKRKLVSKWHPTTKGTLKRSYRVPSKTVGKKLLKAIASLLSDDDHFLDASSHKGCQIRRESAHGESVCCNNVRALFDELPTPHLIVEITPFPAGPLTEKDYIKAEKLEKVLRSAASI