Information report for BVRB_5g120160
Gene Details
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Functional Annotation
- Encodes HTA11, a histone H2A protein. Loss of all H2A.Z (triple mutant with HTA8 and HTA9) results in a reduction in DNA methylation of transposons but not that of genes. Loss of H2A.Z causes misregulation of many genes involved in the response to developmental and environmental cues, and that these genes tend to have high levels of gene-body H2A.Z.
Homologous
- Daucus carota: DCAR_002691, DCAR_012510
- Gossypium hirsutum: Gohir.A13G198200, Gohir.D13G203700
- Manihot esculenta: MANES_14G128100, MANES_03G018100
- Musa acuminata: Ma00_g00340, Ma01_g21330, Ma04_g24500, Ma08_g27600, Ma06_g25830, Ma08_g04380
- Nicotiana attenuata: A4A49_31668
- Populus trichocarpa: POPTR_018G032000v3, POPTR_006G249400v3, POPTR_006G249300v3, POPTR_018G032100v3
- Sesamum indicum: SIN_1012363
- Vitis vinifera: VIT_04s0008g04700
Sequences
gDNA Sequence
- >BVRB_5g120160
GAACTGCACAAATAGACGAGAACGAACTAAATTAACAAGCACCTAAATAGCTAATAGAATCACACCTAAATAGCCTTGACGAGGTCCAAAGTAAAGATATTACAGCTAGAAGTTCATTCTTACTTGACATCCAATGTACTTAAATCTACCACCTAATTTTATCAGATAATGGAATTTCAGTCCTTGGCTGATTTGTTGATCAATGACTTGTGAATGTGAGGAATAACACCACCACCAGCAATGGTTCCCTTGATGAGGGTATCGAGCTCTTCGTCTCCTCGAATAGCGAGCTGCAGATGTCTAGGAGTGATCCTCTTCACTTTGAGATCTTTGCTTGCATTTCCTGCTAACTCAAGCACTTCTGCAGTCAGGTATTCAAGAATAGCAGCAGAGTAGACTGCAGCAGTTGCACCAACACGACCGTTTGCTGAGACTCTTGTCTTTAGGTGCCGGTGGATTCGACCAACTGGAAACTAAAGATCCCTCACACACACAGCCACAAAAAGAATACAACAATTTATGAACTCATAAATAAGTACATAATGACAGAAACCTCACACTCAATCAAGGTAAAATATCACTTCAATGAGTGTATAATTATTAGCAGAACAGTAGTAATCCAGAATATCTAACAAAAATATGCAACTTCCAGGGTAAAGGAAAAAACATTAGCAGTTAAGCTTCCTCAATAAACGTAATTTTACTTCAGCAGATTTCATCAATGGGATATCAGAAAAAGTAACAAGCTGTCTTTCAGAATATCAATACTAAGAAATTCTAAAAAGGGTTGCAATGAGGGGGAAGGGGCCAAGGGGGTGACCAGGGAGGCAAATCTGTTGATTTAGAACAGATATGCACATTTTTTGTTTATAACAACAATAAAAGTAGTACATTGAATCAAAAAAAAGTGATAACCTACTGAGAATTCTATATATTACTAATTTGATTCAATATACTACTTTTTTGTTGGTTAAACAAACTTAGATGTATCTTGGCTACAACCTTGAGATATTAAGCAACAATTGTGCCTAGACCTAAAATGCGAATACAAACAAAAAGTCAAATTCAAATCATTGACATTGATACCATGATAGAATTAGCATATAGCTTGAGTGAGGATAATGCACATTAGTAGAGCATTGAACCGATTTTTTCATTTGAATTCTCTGAATAGCAAAAAAATAAAAGATTGTGGGTATGAGTTATGGAAATAAGTTTTCACAACATTTATATACCTTAAAGGTAATTCCAACAAATAAATCCTCACGATAAATTTTGGTTTACATTAATTCTAACATGGTATCAAAGCCAGTAAATTGAAAATTTCTTAGAGTTTGCATTTTCTCTAATAGCTTCTATCTACTCAGTTGTTAGCTTATTTTCAACTTCCCAAACATTAGGGATAAGCAAAGCTTATAACTTCTGTTAGATAAATCAACCCCTTTCCTTTCATCGCATAATAAAGCTTTGGATTATCACTCTATAAATAAGGCTAATAACAAAGAGAAACTATAACCTCACTCTTCATGATTTGATTAAAATGAAACCCCTCCCCCTAATGATCCAAAAATGTACTAGATCATAAAAGGTGACAGTTTCATCTTTTTATGGTCAGTATTGTATCATATTGAAGAGGGAAATAATACTTATAAAGGATAATACTTTGAGTTCACTACTCCACCACTCCTTGTATCATTAGATGTAACTTGTAAGCTAGCAAATGAATTCCATATCTTACAGATTAGCAATCAACTAACATTTTTCACATAATCATATTCAACATACCTTAAAGTTCTTTATGTAACTTGCTTTCCATGAGGCATAAACATTAACTTACAAAGAGAAGCCAAGTGAAACTTTCATGTTATTTCTAAATTGTATATTGCTAGTGAAATGGTGACAATCTACTACAATAAGGGGCTAACTTTGTCAAATCTAACCATACATATGGTTGTGAATTTCAACAACCAAAGAATTCTATAGAATCAATTCTATATGCCACTTGAATATTAATGAGTTCACAATTTTCAAGAACAGTTGCCTCCAATGATTTAAAAAAAACAGTCAAGTCTAAGAGCACCTTAAATTAGGTAATTTTCAAATATATTTAGTAAGTGGAAGCATTGCACCTACAATTTGATTTATAAAGATGACTAATGTGAAGTAAATGTGTCAAAATTAAACGACAAGCTCCAACACCATGTTAGAAATCGTGGCCACACTGTTATACAATACTTCCCTTGGCTTAGAGTCTTAAAATCATCATTTCAAGAACAGCTAGAGAATAATTGCACTGATGAAACCTATATACAATTAGCCAAAGCATGATTTACAATAAAATTATTTGAAGATCATAGATTGAGACAAAAGGAGTAAAAAACCATGAGAGAAAAAAGAGGTGGTTATAAGCCATAGGATTAGCTCTCTCTATATTGCAGATACCCATCTCACTCTTAATTCTCACATAAAGCTCTTATCATTCCTCCATAACTTATGTTATTCATACTCGGCTATTTTGTAGAAAAAAGTCAAGTTTTTAGTTTAAAATGAAGTATGAAAGTAAAGTATCATGTCAGACACAACACAAAACTCCATTTTTGAGGTAAATGAAGGTGACGGAGTAACACTGCCTATAACCATTCATATAAGTCATCTTAAACCATGCTTTACATTTTCCATTGACTAATTCTAACATGGTATTAGAACAAGTTATTTAAAATTTTCACTTAACTTGCGTAATGTCAAAGAAAAGTTGATTTTCTCATGTTCATTCATCTCACTCTATATTAATCAACATGCAAAAGTACTATCAATCATAGAGCCAAAGTCTATTACTCTTCCAATATTAGTAGTAGAAGTCATCAAGCTCAAAGTTTGTGAGTAATAACTTAAAAGTTTGTAAAATATTTTCATGAAAAAACTATTTTTCTCTATTTTTAATCTTACCTTGTTTGGTTTGCAAAGTAGTGTAAAACTATTTTCTCTAAGAATAACTAACGATGAAACCAAACAATGGAAAGCTAATTTTGGAATTGTGTTTTACATTGTGAATTGTTTTCCATGAAAATTGTTTTACACTGAAAATCTTATACACCCAACCAAACAAAACCTAAATACTCACCCCAAACACCCCTCGCATAAATCTACTAAAGTTTGTAACTAAATAAAAATGTAGCAATTAAAAAAAGACGACTTTCGAAAGCACAACTAAGCACATCCATAGCCAGATCTAGCAACAAGTAAGCATCACTCCCAATCAAAAACCATCAAATTCACCATCATCTTAAAAACCATCAATCACTAGAAAAATTCACATTAAAATACACAGTAGAATAACAAGTAATTATCCATTTATTCCATTTTAAACTCAAATCAAGGAATAAATAAAAAATACAGATCCAAAAACATATATGAAGAAAGAGAAAAAATGGAGAAGTTTACCTGAAGACCAGCTCTAGAAGAGCGAGAAGTAGGTCTCTTCTTCTCCTTCTCTTTATTACCAGCTGTTGTTTTACCTGCTAAAAGCCCCTTTCCTCCTTTTCCCGCCATTTTTGTCTTTTAATTTCAAGATCTTCGCAAAACATAAACAAAAAATTATCAATCATTCAATTATATCATCACATAAAAAAGAATTGAGAAGAGAGAACATCACAAAAACTCTCGCGTAAAATAGAAAAGCGTTTCATTTATTTCAAAACGGAGAAATTATAATACAGTTTCGAAAATATCCGACAGCAAATATCAAGATAATAGAAGTACAAATTTGATTGAATTAAACGAGAGAAAAAAAAGAAAGATAAGATTTAGTTAAGGGAGAGAAAGAGTTTACCTGACAAAAATGACAAGAAGTATGAACAGGTTTTTTGAGTTAAGTTTGAGAAGTT
CDS Sequence
- >BVRB_5g120160
ATGGCGGGAAAAGGAGGAAAGGGGCTTTTAGCAGGTAAAACAACAGCTGGTAATAAAGAGAAGGAGAAGAAGAGACCTACTTCTCGCTCTTCTAGAGCTGGTCTTCAGTTTCCAGTTGGTCGAATCCACCGGCACCTAAAGACAAGAGTCTCAGCAAACGGTCGTGTTGGTGCAACTGCTGCAGTCTACTCTGCTGCTATTCTTGAATACCTGACTGCAGAAGTGCTTGAGTTAGCAGGAAATGCAAGCAAAGATCTCAAAGTGAAGAGGATCACTCCTAGACATCTGCAGCTCGCTATTCGAGGAGACGAAGAGCTCGATACCCTCATCAAGGGAACCATTGCTGGTGGTGGTGTTATTCCTCACATTCACAAGTCATTGATCAACAAATCAGCCAAGGACTGA
Protein Sequence
- >BVRB_5g120160
MAGKGGKGLLAGKTTAGNKEKEKKRPTSRSSRAGLQFPVGRIHRHLKTRVSANGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINKSAKD