Information report for BVRB_5g117920
Gene Details
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Functional Annotation
- RPD3-like histone deacetylase. HDA6 mutations specifically increase the expression of auxin-responsive transgenes, suggesting a role in transgene silencing.
Homologous
- Actinidia chinensis: CEY00_Acc26765
- Capsicum annuum: T459_32871
- Cucumis sativus: CsGy1G001130
- Glycine max: Glyma.17G085700, Glyma.05G040600
- Gossypium hirsutum: Gohir.D03G104300, Gohir.A03G061700
- Manihot esculenta: MANES_14G061800
- Medicago truncatula: Medtr3g077160
- Nicotiana attenuata: A4A49_27879
- Populus trichocarpa: POPTR_015G082500v3
- Prunus avium: Pav_sc0006018.1_g360.1.mk
- Prunus persica: PRUPE_5G167200
- Vitis vinifera: VIT_17s0000g09070
Gene Resources
- Pfam: PF00850
Sequences
gDNA Sequence
- >BVRB_5g117920
CTAACATGACAGCTTTATACTGAACTTCTAGCTTAATGTTTACATATATTAACAAGAATCACCTATTTGAAGAGTTACACGAATCGACTAATCTGTCACCCAAAATAGAGGCAGTTTTGCCAATGTTCAAATAAGGTAGTGCCCATGCTAAGTGCTAGCTCCTTTGATCCTTTTCTTTACGTTCCCCGTATAAGAGGATGCACAGAGATTAATTACACCTAATTAATTGACATTAATACCATCTCTTTTGTCAAGTAAACTCCGAAAAAATAAAGTAATCTCCATCTTTAAGGATGGTCCAATGTATGTTTCTGTTCGAGCCATGATGCAACTATATGTTCCAATCCTGCATAGGCGTTGCTCTCACACTCCACATCTCAGATGTTATCTGCATAAAGCATTACACATAATATTGTCTTAGCTTGATACAACCCAAACTAAATTCTTCATTAAAAAAAAAAAAGCATAAACAGGAATTCAAATCATTAACACGAATATAGCAAATGAGATGTAGTAAAACCAAGAGAAGACAAGGTCACAAAAAAGATGGTATTATCAAGGATTGAAGAGAGCATAACAATCCCCTTCTTGTAAGCAGATGCTTTTAGTTGCTGTTAATAAGTCGGAAAGACAATAAAGAGAAAAGGCTCGTAGCATTAAAAACAAAGTACTGGTATCACAATGTCGAGTCAAAAAAGTAACTCCTTTTTTTGTGCTTTGGATTGCATTGTGAGAAAGTATATGCACCACTCTGTCCTCCCATTCGCATATGTAAGGTTCTGCCTAAAACAGCCTCCATGGATATCCTAAACATGGGTGCTCGACTAAAGAAGGGAACAGTTGTGGCTACAAATCATTATACTAGAACACCACCCAATGAAAATATCTTGAAGATCAATCTCAATATGGATCCATATACATCCTATTGTTTGTTTATGGCCTTACGGGCAATGGGATGAAATTAAACACTGGAAACACAAATAAGGATTAGGTAACAATATCAACCATACATGTTGTCAAGCATTAGACTTACCTCTTGCCATCATTTTCTACAAACCGTCCTCAGATTTTAAAGTCCGGTGTTAAGGCATCACATGGTCCTCGGGATCAGAATCATAATCCTCACCATTCCAAATGCGAGGTTTCATTCTTTGATCCTTATCTTCTTCTTCTTCCTGTACCAAATACCAACACAATCTCACATATGATTAACATCAGCACATTTTGGGGACAACACTCAAAAAGTAAAAACCAAAAGGTGGAATTAAAGATCAATGTTGTAGCAGTGGACCTCTTCTGGCTCCTTTGCGTTAGGAGGAGTTGTCTGAAATGGAACACTTGGAACATGAGTTATTCTAGATAGTTGCTCTAGAAGAATATTCCTGCAAGATTATATCCAAAAAAGGCATGCATCAAAATTAGAAGACAAAGGTGATAATTATAGTAACCGGAACAAAATCCGGTACAAAAAACCACTCCATTAACTCACAAAACTTTATTTCAAAAACACAGCCCTTGATGCATACAAGTAACGGCGCAGAGAAATGATACATGGACACATTTCACACAAACATGAAGTTGGTTAGTTCTTAACTTAAGAAAACTAAGATTGTGTGTCTTAGAGTAAAAAGGAAGAAAACAAAATAGGGAAAAAAAAATATAATCGAACGGTGTGAATTACTTAAAGCACAAAAACAAGACAACGTAAAATTTACTTATTGAAATTACCAGAACCTACAGTCTCTTACCACCGTGCTCGACCATAATTTAATAATCTATAACCTTAACATGATCTCTTTGAATGGACAATATAATTTCTAAAGAACCAGCTCATACCCTTAGCTGTATCCAGTTCAAAGTCAATCGATTACTGGACACCCAGAAATAGATTCTGAACACCCAAACCCGCACTTATCCTGGCACAATGGCACATATGAAGTATTTACTGGAGTTCAGCGGAATGTGTAAAGCCACGGTTAAATTACTAAAGACTTGGATATTTAAGATCATCTTCTCATAAATTAATAATTCAAAGATAAAGAATTCACCTAACTAAGCATTGAAGCCACCCACACCAGGTATGGGGCGTAGAGCTGAATCGATAGACTCAGATTCTCAGACCAGACTTACAAATATATATGAGGAGACTAGCATCACCTTCAAACTGCACATTCCTGAAACATTACTCTGAAGAAAATTTATCCCCCTTATCAATGGTGTAAATTAGAACTAGGGTCAAGGAAATAGAAAGTTGCAGTGCACATCTCACTAGAAGAGGAAAGTGGAAGACTATTTAGGAATGCATCCTCAGCAAGATAGCCATATGCTTATCAACCAGACAAAGTGAGATGAAACCTCAACAGAAAACTCTGACAGATTCTAGCAGGCTTATGCAGACTGATTATTTCTTTTTAGCTTACATTGAGAGTTTCTTGGAAAACTAGAAACTTGTAATGTTCAAAATTTTAAATTAGCTAGTCACCTCTCTTGAAGCAATAATCTGTTGATCTAGCTGCCTCCGAAGCCACAAAGGACTATCTAAATGGATTCTTTTCCGCTGAAAAGCTCCAATTGCATCATAGGAATTACAAAAAAAAGGGTTCTTTCATATACTTATAATTATTATCGTCAATTCTGTCATTTTCACAGGATTTGTGATCGCGAATCGCGATCCCGCGAGGGTGAGCTAACCCCAAAAACCCGTCCTCAATTCAGATTGTAGGCTGCAAACTTGCCTGCATGTAGCCGGAATCGCTAGTAATCGCTGGTCAGCCATACGGCGGTCAATTTGTTCCTGGGTCTTATACACACCTCCTCCCGTCACACTATGGGAGTTGGCCAGGCCCACAGTCGTTACCTTAACCGCAAGGAGGAGGATGCCAAAGGCAGGGCTAGTGAATGGACGGATATTTAAAGAAGTGAACATCATTTTCAGTGGCAGGGTCCGGCAAAAGAATAGGAATGGTAATTTCACTATATCTTTTCCCAGGAAAAATAACCTCAAAGGAATTCTGTATAATTAATCCACAAAGTTCAAATAAGAAATGTAAATTACCGGATTTTCTCCAAATCTTTGGGCGAGTTCTGGTTTTCCATGTTGCTAGGCTCCACATGAAGGGTGTAATCTGGGCCAAAATACTCATAATACTCATTGTAAGGAAGCTTATTATCAGGTTCTATACCAACTGCGACTGCTGTCTGCAATTAATAAATCGAAACTTGTATTAACAGTAGAAGTTGCAATAAGTGCAAAGCAGAAACACACAAGCACACACATATACACAGAGAAAGAAAGAGAGAGACCTCATAGCACCAGCAACGAGCTACATTTCGTATAGTGTATCCTCCTCCACCCAGCACCATTAGAGGGACGTTAAAAGATCTAAGAAATCGCAAGCAATCAGCATGACCTTTTACAGACAAGTTGAAACAACCAAGCCTGTCACCAGAGAGTGAATCCGCCCCGCATTGCAGGACAACTGCATCTGGCTGGTATATATCCATGACTTTTTGAATGATGGGCCTGAAAAGACCTCTGAAACTGTCATCATCTATTCCATCATTGAGTGGAACATTTAAAGAGTAATGCTTCCCAGAATTAGCTCCAATGTCTTTGATGTGTCCAGTTCCAGGAAAGAAGTCACCGAACTTGTGAAAAGAAACTGTCATAACTCTATCAGTGGTGTAAAAGGCCTCTTCAACACCATCTCCATGATGCACATCAATATCGATGTACAGCACCCGCTGCACAAAGAGAGAGTGAGATTAACAGACAAAATGAAGGAGATAGCAGCCTTTGTACTCTCCATGAAGGGGCGGGAAAATACAAAAGCAAAGATTCCAGATTTAAGAGTGACCCTATAGGAATCAATGCAAAGCCTGTCAAACCTAGAAGGACAGGCCAATCAAAAGACCACATGTGAAAGCACAAATGCAGGCGGAGTTGGACAAAGATTAATCAGCATGAATAAATAAAACATTCACACAGCTCTCCCAAATCTATACAGGATAAATGCCAAGTAAAACAGCCAAACAAGTAACTCAGTAAACTCATCATCATAGAATACTTAAGCTAAACCATTCACACAATTCTCTTCCCATCTCATTCCCTACTCTGGCTTAAATAGTAAGTCACACATTTCAAGCTGCCATGTCTTGAGGGCCAAAGCTTTAGATAAAATTGACAGCAGATTCATCCAACAGAACACAAACCTAATTTTATTTTTTAATAGAAAAGCTCGATTACAACTTCAATCCTAATACACAAACAGAAAATCTAGATCCAAACTATTTCTGCCAAAGCAAACACTAATCCTGGGTTCATAGAATGCAGCAAAACAAATTTCCCCATATAGAGTCCTGTCTCCTATTGAAAGCCATCTTTGCCGCAAGTAGGTCCAAGATCAAGCCTCTATAGATTCTATTAAACACTTGATGCAAAAACGTATGAACCATCACAAATTAGAAAAAGAAAAATGAACAAGCTCAACGACCATAGCATGTGATTTTTAACAATTGAAGAAGCCAAACTACAACATCATCAAAATTGAAATGAAAAGATCAAGTAGCATGAAACACACACAACACAGCCTAAAGAAGAATGAGTAGGAGTACTTTGACAGATACTTTGACGTATATTCTCTCCTATCTTCTCCCAAAAAAACTTCTCCACAATTTTCTCCAAATTCCAATTAAATTAAACTCGGACTAATATAAGAGTTTGTCCTAAATTATCATGGAGATACGGAATAGTAGCATATCGAGAAAAAACTGGGAATTCCCCAACAAAATATGGGGTATATTGGACAGTTCGAGTCTTTTTTTCCTTACAAATTACAAAAATGTCATCGTGATAAGCATTATTCACATCAAATGAAATCAAATTTGGACTAATGAAACCTAATTCCAACCCAAATTCATCAAAAAAAAAAAGAAGAAACTCCTAAACTAGTCCTAACCCAAAAGAATACAGGATCATCTAAACACCAAAGCAGTTCACACTCGCCATTACTCTATATAGTAGTGAAATTTCAAGAATCCTACAACACATTAACAAATTGCTTCGACATGTATACTCAGATGTTCAAAGTGAAACTCTTAAATGATGACAAAAAAAATTGCAAAATCGAGCAAACTTCATTCATGTAAAGATAACAATCCCTTAAGCAAGATTCTTACTTCCCAATTTCTTTGGTTCCAATAATCACCAAAAAATAGTACTATGACACTAAAATTTTGCAGTGATCAAGCGAATACCAATTAATGCAAATTGATTCAAGGCATAATCTCAACAACTAAACTCAAATGAACATTCATAAGAAGACAACAAAAACAGCAATGTCACACCCTTAAAATAGGTTGACAAAAAAACAACACCCTTAAAATAGGTCTACTCCATGAGTTAAGATTTTATCTTCAATAGTCATCTATCAAAACGGAAACCAACACACCCAAAATCAAATAATATTTAATGGGGTCGGCTGCATAAGTCAAGATTTTTAGTCATCTATCATGAGAGAAACCAAAACCCCCAAAATCATATACTATTGGGGTCGGATGCATGAGTCAAGATATTATCTTCAATAGTCATCTATCATAACGGAAACCAAGACCCCCCAAAATCAAATAATAGTTTATTAGGGTCAGCTGCATGAGTCAAAATCTTAACTTCGAAAGTCATCTATCAAAATAGAAAAAGAAAAATGAACAAGCTCAACGACCATACCATGTGATTTTTATCAATTGAAGATCCAAACTACAACATCATCAAAATTGAACGAAAAGATCATTTAGCATGAAACACACACGACACCGCCTAAAGAAGAACGAGTAGGAGTACTTTAGACAGATACTTTGACATACATTCTCTCCTATCTTCTCCCGAAATAACTTCTCCACAATTTTCTGAAAGTGACACAAGCCTGTGTTATTCAGACACGGATTGAGTGTATACTCGAATACGGGTGTCCAAGTGTCCGACTTGGCTATTTTGTAGAAAAAAGTCAAGTTTTTAGTTTAGAATGAAGTATCCAAGTAAAGTGTCGTGTCGGACACGACGCCCCATTTTTGAGGTAAACGAAGGTGTCGGAGTAACACTGACACAAGCCAAGTCCCCACTGTCACATAACTCTATGACACTTGCAAATTCCAATTGGATTAAGCTCGGCCTAATATAAGAGTGTGTCCTAAATTATCATGGAGATAAGGAATAGTAGCATATCAGAAAAAAAATTGGGAATTCCCCAACAAAATATGAGATGTTTATGACAGATCAAGTCTTTTTTCCCTACAAACTACAAAAATGTCATCGTGATAGGCACTATTCACATCAAATGGAATCAAAATTGAACTAACGAACCCTAATTCCAACACCCAAATTCATCAAAAAGATAAAAAGGTCCAAAGCATTTTACAGTCACCATTAACTCTATAGCAGTGAAAATTCAAGAATCCTGCAACATGGTAACAAATTGCTTCGACATGTATACTCTGATCATCAAAGTGGAACTTCTAAATGATCAAGAAATAGATTGCAAAATCGAGCGAAATTCATTCATGTAAGAGACAAAAATCACTTAAGCAATATTCTTACTTCCCAATTTCTTTGGGTCCAATAATCACCAAACAATAGTACTATGACACAAAATTTTTCCAATGATCAAGAAAATACCAACGAATGCAAATTGATTCAAGGCATGATCTGAGACAACTAAACTCAAATAAACATTCATGAGATGACAACACAAACAACAATGTCACACCCTTATGATAGGGTCGGCTACATGACTCAAGATTTTATCTTCAATATTCATCTATCAAAACAGAAGCCAAAACACCCAAAATCAAATAATCTCTATCTCTATTATATAAGACAATACATAGACAGCAAAAATTAGAAAAAGAAAAAAAAAGGGTAAGGTTAACTATATCTCTATTATATATGAATAATTTTATATGCTTTCGCACGCATTATATGCATACAAAACTAGTAATGTATAGAAGTCGGTTGCATGAGTCAAGATTTTATCTTCGATAGTCATCTATCAAAACACAAACCAAAACACCCAAAATCAAATAATAATTCCAGAAAGACAGAGATAAAGAGAGTTTAAAAAAAAGCCACAATACCCTATGATATTTAAGAAGCTCAAGAATCCCAAGCACAATATCATTAACATAACAAAACCCAGAAGCTTCAGACTTCTTAGCATGATGCAAACCACCAGCCCAATTAATAGCAATATCCGCATCCTTACGATTCAACTTAACCGCCGCACCAATCGAACCACCAGCAGACGCTTGACAAAACGAGAAAAGCCCAGGAAAAACAGGACAATCATCGCCAACATTAAACCTCTTAAGATGCCTAGAGTGCGAGTGATCGAGCGAAGAAACGGAAGAAGAGATAGAATTTGCGGCACAAAGTTCAGGTGAGACGGTGGAGAGAAAATCAACGTAGTCGTCGGAATGAAAGCGACGAATATCAGAAGATGCAGCGGGAAAAGGGCGGTTGATTTCCATGCGACGATGAAGAGAGTAGTGGACGATGAGATTGTGGGCCATACGAATGCGGTGAGGTTTCATGGGGTGGCCTTGACCGTAGTAATAGTCGCCGATTGAAGGTTCGTAGAAGTAGGTTACGCGGCGTTTCTTGGCGTCGGTTGATGCGGGTGAAGGGAGTGATGCGCCTCCTAGAATGGCGGGATCTTCCATTGTTGTTGTTACTTGTTAATGATGATGCAGTCTTTTTTTTGTTTTCTTCAGTTGTAGGAGTGATTTGTGGGAGTGTGAGGAGGATTTTCTTGCAAAAATGAGGGGGAAGAACTAGGAAG
CDS Sequence
- >BVRB_5g117920
ATGGAAGATCCCGCCATTCTAGGAGGCGCATCACTCCCTTCACCCGCATCAACCGACGCCAAGAAACGCCGCGTAACCTACTTCTACGAACCTTCAATCGGCGACTATTACTACGGTCAAGGCCACCCCATGAAACCTCACCGCATTCGTATGGCCCACAATCTCATCGTCCACTACTCTCTTCATCGTCGCATGGAAATCAACCGCCCTTTTCCCGCTGCATCTTCTGATATTCGTCGCTTTCATTCCGACGACTACGTTGATTTTCTCTCCACCGTCTCACCTGAACTTTGTGCCGCAAATTCTATCTCTTCTTCCGTTTCTTCGCTCGATCACTCGCACTCTAGGCATCTTAAGAGGTTTAATGTTGGCGATGATTGTCCTGTTTTTCCTGGGCTTTTCTCGTTTTGTCAAGCGTCTGCTGGTGGTTCGATTGGTGCGGCGGTTAAGTTGAATCGTAAGGATGCGGATATTGCTATTAATTGGGCTGGTGGTTTGCATCATGCTAAGAAGTCTGAAGCTTCTGGGTTTTGTTATGTTAATGATATTGTGCTTGGGATTCTTGAGCTTCTTAAATATCATAGGCGGGTGCTGTACATCGATATTGATGTGCATCATGGAGATGGTGTTGAAGAGGCCTTTTACACCACTGATAGAGTTATGACAGTTTCTTTTCACAAGTTCGGTGACTTCTTTCCTGGAACTGGACACATCAAAGACATTGGAGCTAATTCTGGGAAGCATTACTCTTTAAATGTTCCACTCAATGATGGAATAGATGATGACAGTTTCAGAGGTCTTTTCAGGCCCATCATTCAAAAAGTCATGGATATATACCAGCCAGATGCAGTTGTCCTGCAATGCGGGGCGGATTCACTCTCTGGTGACAGGCTTGGTTGTTTCAACTTGTCTGTAAAAGGTCATGCTGATTGCTTGCGATTTCTTAGATCTTTTAACGTCCCTCTAATGGTGCTGGGTGGAGGAGGATACACTATACGAAATGTAGCTCGTTGCTGGTGCTATGAGACAGCAGTCGCAGTTGGTATAGAACCTGATAATAAGCTTCCTTACAATGAGTATTATGAGTATTTTGGCCCAGATTACACCCTTCATGTGGAGCCTAGCAACATGGAAAACCAGAACTCGCCCAAAGATTTGGAGAAAATCCGGAATATTCTTCTAGAGCAACTATCTAGAATAACTCATGTTCCAAGTGTTCCATTTCAGACAACTCCTCCTAACGCAAAGGAGCCAGAAGAGGAAGAAGAAGAAGATAAGGATCAAAGAATGAAACCTCGCATTTGGAATGGTGAGGATTATGATTCTGATCCCGAGGACCATGTGATGCCTTAA
Protein Sequence
- >BVRB_5g117920
MEDPAILGGASLPSPASTDAKKRRVTYFYEPSIGDYYYGQGHPMKPHRIRMAHNLIVHYSLHRRMEINRPFPAASSDIRRFHSDDYVDFLSTVSPELCAANSISSSVSSLDHSHSRHLKRFNVGDDCPVFPGLFSFCQASAGGSIGAAVKLNRKDADIAINWAGGLHHAKKSEASGFCYVNDIVLGILELLKYHRRVLYIDIDVHHGDGVEEAFYTTDRVMTVSFHKFGDFFPGTGHIKDIGANSGKHYSLNVPLNDGIDDDSFRGLFRPIIQKVMDIYQPDAVVLQCGADSLSGDRLGCFNLSVKGHADCLRFLRSFNVPLMVLGGGGYTIRNVARCWCYETAVAVGIEPDNKLPYNEYYEYFGPDYTLHVEPSNMENQNSPKDLEKIRNILLEQLSRITHVPSVPFQTTPPNAKEPEEEEEEDKDQRMKPRIWNGEDYDSDPEDHVMP