Information report for BRADI_5g17270v3
Gene Details
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Functional Annotation
- RNA binding protein which cotranscriptional splicing of a key floral repressor gene FLOWERING LOCUS C (FLC), , facilitates R-loop formation near FLC intron I to repress its transcription, thereby promoting the floral transition. inhibition of cotranscriptional splicing of FLC by nuclear HRLP condensates constitutes the molecular basis for down-regulation of FLC transcript levels.
Homologous
- Arabidopsis thaliana — AT2G44710
Gene Resources
- Pfam: PF00076 PF08777 PF11608 PF13893
- UniProt: I1J077
- EMBL: CM000884
- KEGG: bdi:100827844
- OMA: SEMRRPY
- InterPro: IPR000504 , IPR012677 , IPR035979
- PANTHER: PTHR21245
- SUPFAM: SSF54928
- PROSITE: PS50102
- Gene3D: 3.30.70.330
- OrthoDB: I1J077
- CDD: cd00590
- eggNOG: KOG0117
- STRING: 15368.I1J077
- HOGENOM: CLU_356937_0_0_1
Sequences
gDNA Sequence
- >BRADI_5g17270v3
GCGGCCTCTGCCGGATGGTTAACCCGTAATTACATCCAGTCCCATCGTCCAGATTGCAGAATACGATTCGACCCACCAGGGTGAAGGCCGAACCAACGATACCTAGGCCGCCCGGGTCTCCGTGACCGTGCTGGCTCTTCTCCGCGACCTAAAGGCCGCAGCTTTTCGTCTCCAGCTCTCGCTAGGGTTTCGGTTCCCGAATTCGATCTTCCGCCAGGGCACGAGGTACGCACGCCCACGGATTTCGACCTTTCTGCCCCCATCCGACTTGCCGCCTGTTTCTGTCTAATCTGTGTTTTCTTGTGTTGATTTCTAGCCGGTGTTTTCTGGTTTTGTTCTGACCTGGGAGATGCCGCCGAAGTCGGCTAGGAGGGGTGGCGCCGCGGCCGCGAGGAAAGGTCCCGGAACAAGGACCAGGGCGGCGAAGGCCCAGCTTGCCGTGGAGGAGGCGGTGCCCGTCGAGGAGGCGACCGTAGAGGAGGTGAAGGCCGCGGAGGAGGCTCCCAAGGTGGAGGAGCAAAAGCAGCAGCCTTCGCCGCCACAGCAACAGCCCACTGCTGAGGAGAAGCCTCCGCCGAATGCCACAGAGAACGGGGCAAGCCGTGCTGAAGGTATTGCGCTGTGCCTCTGTTTATACACTTATTTTCTGCGATCTGTTATATGGCTGGAGGAAGCCCTGATTTGGTGCATCTGTTTGTCGGTGCAACAATCTCCCATTTGTTTTGTGTAAATATATGCGACGCAGTTTTTTCATCACTACCGATGATAAGCAACTAAGCATGGGTTGATTGGTATTGCGCATATTGGATTTACTGGATCCGTTAATACTTTCACCAAGTAGTGTTTTTTTATTAGTTTCGTTTTATTTGTTGGCTGAGCTTTCATGGCATTTTGTTTTACAACAGCCACCCTGGATTTTGCTTATTTACCGTGAATTACTCCCTTAGCAAAGCATAGAAGAAAACATGGTTTGTTGCAACTTACTGTATTTTTACAACAATGTGTGGCCACTTCATTAGCTTATATAGATGGAGTTTGAGGTCTATGTATCTTATGTTTCCTTCTTTTTTAGATGACGGAACTGTTGTGAAAGAAACAGATGAAGAGGATGACAAAGGTGAACGACTGGAGTTCGAGGATGAGCCAGAGTATGAAGAGGAGGCTGCTGTGGACTATGATGAAAAGGAGGAGCAGTATGAGGAGCAATATGAAGAAGGTGATGAAGTGTTTGAGTATACGGAAGATGTGGTTGAAGAGGAGACTGATATGGTCGATGAGGAACTGGATGAAGGTGGGGATGACGGGGAGGGTGAGGAATATGAAAATGCTGATGAAGATCATAACGTGGATGTGGATGATGATGACCATCGTGAAATGGTTAAAGCAAATCGAAAGCGGAAGGAGTTTGAAGTTTTTGTTGGCGGGCTAGATAAAGATGCAACAGAAAGTGACCTTCGGAAAGTTTTTAGTGAAGTTGGTGAGATCTCTGAAGTTCGTCTGATGATGAACCCTGTTACAAAGAAGAACAAAGGCTTTGCTTTCCTACGATATGCGACAGTGGAGCAAGCAAGGCGTGCTGTCTCAGATTTAAAGAATCCACTGGTTGGTGTTAATAATACCTGAATATTTTTGTTTATAGTATATTTTTTATTACAAGTAACATAATCATTATTTTTATGTTGTAGGTGCGAGGGAAACAATGTGGGGTTGCTCCTAGTCATGATAACGATACACTTTTCGTTGGCAATATCTGCAAGACATGGACAAAAGAGCATGTATGATCCATAAACTCTTTTTCTTGATGTTATTTTGTCTTCTTTCTGGTGGAAGGCATAACATGTTTTTGAATTTACAGCTGAAGGATAAATTGAAGAGCTATGAGGTTGAGAATTTTGATGATTTAATATTGGTTGAGGATAGCAATAATCCAGGGATGAATCGTGGGTATGCTTTGCTAGAGTTCTCTACGCGTCCTGAAGCTATGGATGCTTTCAGGCGATTGCAGAAGAGGGATGCAGTCTTTGGAGTTGATCGCAGTGCAAAGGTTTCTTTTGCCGATTCCTACCCTGAAGTTGATGATGAAATGATGGCACAGGTAAGCGCTTGTTTTGTACAGTAAATTTAAGTGACTTTGTCGAGGTAAAATATTTAATATTGCTTGCCATTCAGTCAATTCACTTCAGCAGCTGTTATTAATTTCTATGTTTCTGGTGTTGTTTCCTGTGTATGGTCCAAATATGCAAAAAAAACTGTTGAATCCTCATTTTGGTTTTATGGTTCAGGTGAGAACTATATTTCTTGATGGCCTCCCTCCCTCATGGGATGAAGATCGTGTAAAGAAGTACCTTAAAAAGTATGGAGCTATTGAGAAAGTTGAACTTGCTCGAAACATGCCTGCAGCGAAGAGAAAAGATTTTGGGTTTGTTACTTTTGATACACATGATAATGCTGTTGCATGCGTTGATGGGATAACTAGTTCCGAGATTGGTGAAGGTGATAGCAAGGTCTGTTTCCCAACTTGAGTTTACTTCACCATCCTAACTGATTTATATCATATATTCCTCTGTTGGACAACACATCAATTTGCCATGTAATTCCTTGCAATGACTATTATTTTGTGGTTCAGGCAAAAGTGAGAGCCAGACTGTCAAGACCACTGCAGAGACCTCCTAGAATGAAGCATGGATTAAGAGGAAATTTTAGGATTGGGCAAGGTGCTCCTCGAGGTGGTCGCTTTTCATACGCTCGACCTCTTCCGCCACGCCGTCCTTTACCACGTTTTGTACGACCTGATGTTAGTCGGTTATCACCCATCAGGGGCCGCCCACTGAAGAGGCCAATAGATATTAGAGATAGACGCCCTGTTATGTCAGTACCGGACAGAGTTAGGCGTTTGCCTCCTCCAGAGAGATCCTATGATAGAAGACCCCCAGGTGCACAGATGGCTGGTTATCCATTTTTGCTTTTATGGTAAACCACTATGCTGTCTCAATTTTTCTCATACTTCATCTGTGCACAGCTCCTGTTTACCCAAAGAGAAGTCCAAGGAGAGAATATGGAAGGCGTGATGACCTTCCTCCGCCAAGGAGCAGGGCTACCTTTGCTGACTACAGTCCAAGAGTTCCAGTGGATAGGCGCCACTCTTATAGGGATGACTATTCACCCCGTGGATCAGCTTACTCAGATTTAGGTCCACGTAGCGCTCCCCGTATTTCTGACAGGAGAGCATATGCTGATGACGGTTATGGAGGGAAGATCGACCGACCTTTACCAACCTATAGGGAGGGCCGTGGCCGTGATTATGATACAATGGCTGGTTCAAAACGCTCCTATGCTGAGATGGTGAGGGTAGTTTACTTATTTGATTTTTCATTGTTTGCAAAATGCACTTCCAGTTTATTCCTCAATTGATCTAATTATTGTTAATAATGTTATGCAAGGATGATGTGCCTCCTCGATATCACGATGTTAGTGTCCGTCAGTCCAAGGCACGCTTAGACTATGATGTTGGTGGCAGCAATGCTCGGTATGCTGATGCATATACTGAGAGGTTGGTGCACATTTGATCGCACTAAGTCTATTTTATGTTTGATTTTTAAGTTCATGTTCTTACACATGCTCATCCTTGAAGGCTTGGACGATCCCATGCGGGATACAGTACCAGCCGATCTGTCTCTGGTCATGATTCTGTGTATAGCAGTAGCCGCCATGGTATGAGTTATGGAGGTATACTTTTTAAGGCTCTGCTATTTGTCATGGTACCTTTGATCGTCACTTATAATTTTAACTCTGATGTCGTCTTGCATTTCATCTTTCCAGGTTCTGCGAGCAGTGGGGATCCTGGTGGAATGTATTCTTCAAATTTCAGTGCTGACTACATGCCTCGTGGATCTGATGTAAGTCCTCAAGTCTTGATAGAATTTGATGGTCAAAATGTCACCTTGTAGACAGAAGAAAACAGTTTGCATCTTGGCAGTACAATTTATTTAAAATTACCAAGCCGTTTATCATGTGATTTCTGCTAATGTATTCAAGTTTCTGTTTGGGCAGGTTGGTGGAAATTCATACTCATCGCTTTACTCAGGCCGTAGTACGGGCAGCAGCGGTGGTTATTTTGGGGGCAGCGGTTCTAGTTCGTATTACTAAGGTGCAAACTCAATCAGTTCCAATTTTCCTTTAGTTTAATTGCATTGCACATAAATTTTGTTCACCATTTTTGTCATCCTAATCATCACCATCATCGCTAATTGCTCACATCGAAGATGGCAAATGTTTTCCCTTGTCAAACATGGGATACCCTCCGTGATCAACCACAAATTGTTTAATGATACAGTTTTGGCATCCTATCGTCTTTGTGGAGCAGATTTGGCACCACAGGAGGTTGGTGTAGGCTGTGGATTGTATGGAGCTCCTTATTATAAGGCCTACAGATGTGGACAAGTAGCAGGTGCCTAGAGATCTGGACAGGTGGCAAGTGTTAGCAATCAAATAACACATTTTCGAAGGAGCCAGAAACATCAAGTTGGTTGAAGCAGTAGTCTTGTGGATGTTCTGGCATGTTTATTTATGTAAGGCTTTGCTTTAGTTGGTCAAGAGTTATGAACAATAGCCAGCTATGGTGTGTTGACATGTTTACTTCCAGTGTTTCTATAACATTGTTGAGAGGTATGGAGTGTTTCAATAAGTATTCTTTGAGGTCATTCCTGCAATGCAAGGTGTCTTGGAGATTCCATCTTGTGATGTGCTGGTTGTCGGCGGAAGATCAGACTTACAAATGAAGCCTTAGAAGTGGGCGCTTCGTGTAAGGCTGTTACTTCTGAAACCGTTGGTTCACAGCATGATGCGCCCGTTCTTTATTGGATCATAATTTGCTGCCTGAATGAAAGCTGATTGGTCAGAATGAAATTTTGGATTCGTTATTTATTAAACTGCAGTACGGATTAAATTGGATTTGGTAGCCAAATTTGGGGAGAAACCATTTAAATGGCCCAAGTAGTTCTTTCTCAAGATAACACAACTCACAGCTACAGGACTCTTCATAGAGTAAATGGCACCAGGTAAACCTAACAAGCACTGTTCAACATTGAGCGCCATGGTGTACTCACCGTTAATGAAGTATCTCAGAATACTGCATGGAGCATGGATCAATATACATCTTTGAGTCAAATGTCTGTTCGATGGTTGGAAGTTTTGAAGAACTTTTGCTGGAAGCATTGTTCACTAACTAACTAAGCTGCAGTGGTCTGTCCGAGTTCTTTTAATTCTCTATGACATAATCTAGGTTATGTATGGTAGGATTAGCCTACCGTGCATTAGATTT
CDS Sequence
- >BRADI_5g17270v3
ATGCCGCCGAAGTCGGCTAGGAGGGGTGGCGCCGCGGCCGCGAGGAAAGGTCCCGGAACAAGGACCAGGGCGGCGAAGGCCCAGCTTGCCGTGGAGGAGGCGGTGCCCGTCGAGGAGGCGACCGTAGAGGAGGTGAAGGCCGCGGAGGAGGCTCCCAAGGTGGAGGAGCAAAAGCAGCAGCCTTCGCCGCCACAGCAACAGCCCACTGCTGAGGAGAAGCCTCCGCCGAATGCCACAGAGAACGGGGCAAGCCGTGCTGAAGATGACGGAACTGTTGTGAAAGAAACAGATGAAGAGGATGACAAAGGTGAACGACTGGAGTTCGAGGATGAGCCAGAGTATGAAGAGGAGGCTGCTGTGGACTATGATGAAAAGGAGGAGCAGTATGAGGAGCAATATGAAGAAGGTGATGAAGTGTTTGAGTATACGGAAGATGTGGTTGAAGAGGAGACTGATATGGTCGATGAGGAACTGGATGAAGGTGGGGATGACGGGGAGGGTGAGGAATATGAAAATGCTGATGAAGATCATAACGTGGATGTGGATGATGATGACCATCGTGAAATGGTTAAAGCAAATCGAAAGCGGAAGGAGTTTGAAGTTTTTGTTGGCGGGCTAGATAAAGATGCAACAGAAAGTGACCTTCGGAAAGTTTTTAGTGAAGTTGGTGAGATCTCTGAAGTTCGTCTGATGATGAACCCTGTTACAAAGAAGAACAAAGGCTTTGCTTTCCTACGATATGCGACAGTGGAGCAAGCAAGGCGTGCTGTCTCAGATTTAAAGAATCCACTGGTGCGAGGGAAACAATGTGGGGTTGCTCCTAGTCATGATAACGATACACTTTTCGTTGGCAATATCTGCAAGACATGGACAAAAGAGCATCTGAAGGATAAATTGAAGAGCTATGAGGTTGAGAATTTTGATGATTTAATATTGGTTGAGGATAGCAATAATCCAGGGATGAATCGTGGGTATGCTTTGCTAGAGTTCTCTACGCGTCCTGAAGCTATGGATGCTTTCAGGCGATTGCAGAAGAGGGATGCAGTCTTTGGAGTTGATCGCAGTGCAAAGGTTTCTTTTGCCGATTCCTACCCTGAAGTTGATGATGAAATGATGGCACAGGTGAGAACTATATTTCTTGATGGCCTCCCTCCCTCATGGGATGAAGATCGTGTAAAGAAGTACCTTAAAAAGTATGGAGCTATTGAGAAAGTTGAACTTGCTCGAAACATGCCTGCAGCGAAGAGAAAAGATTTTGGGTTTGTTACTTTTGATACACATGATAATGCTGTTGCATGCGTTGATGGGATAACTAGTTCCGAGATTGGTGAAGGTGATAGCAAGGCAAAAGTGAGAGCCAGACTGTCAAGACCACTGCAGAGACCTCCTAGAATGAAGCATGGATTAAGAGGAAATTTTAGGATTGGGCAAGGTGCTCCTCGAGGTGGTCGCTTTTCATACGCTCGACCTCTTCCGCCACGCCGTCCTTTACCACGTTTTGTACGACCTGATGTTAGTCGGTTATCACCCATCAGGGGCCGCCCACTGAAGAGGCCAATAGATATTAGAGATAGACGCCCTGTTATGTCAGTACCGGACAGAGTTAGGCGTTTGCCTCCTCCAGAGAGATCCTATGATAGAAGACCCCCAGCTCCTGTTTACCCAAAGAGAAGTCCAAGGAGAGAATATGGAAGGCGTGATGACCTTCCTCCGCCAAGGAGCAGGGCTACCTTTGCTGACTACAGTCCAAGAGTTCCAGTGGATAGGCGCCACTCTTATAGGGATGACTATTCACCCCGTGGATCAGCTTACTCAGATTTAGGTCCACGTAGCGCTCCCCGTATTTCTGACAGGAGAGCATATGCTGATGACGGTTATGGAGGGAAGATCGACCGACCTTTACCAACCTATAGGGAGGGCCGTGGCCGTGATTATGATACAATGGCTGGTTCAAAACGCTCCTATGCTGAGATGGATGATGTGCCTCCTCGATATCACGATGTTAGTGTCCGTCAGTCCAAGGCACGCTTAGACTATGATGTTGGTGGCAGCAATGCTCGGTATGCTGATGCATATACTGAGAGGCTTGGACGATCCCATGCGGGATACAGTACCAGCCGATCTGTCTCTGGTCATGATTCTGTGTATAGCAGTAGCCGCCATGGTATGAGTTATGGAGGTTCTGCGAGCAGTGGGGATCCTGGTGGAATGTATTCTTCAAATTTCAGTGCTGACTACATGCCTCGTGGATCTGATGTTGGTGGAAATTCATACTCATCGCTTTACTCAGGCCGTAGTACGGGCAGCAGCGGTGGTTATTTTGGGGGCAGCGGTTCTAGTTCGTATTACTAA
Protein Sequence
- >BRADI_5g17270v3
MPPKSARRGGAAAARKGPGTRTRAAKAQLAVEEAVPVEEATVEEVKAAEEAPKVEEQKQQPSPPQQQPTAEEKPPPNATENGASRAEDDGTVVKETDEEDDKGERLEFEDEPEYEEEAAVDYDEKEEQYEEQYEEGDEVFEYTEDVVEEETDMVDEELDEGGDDGEGEEYENADEDHNVDVDDDDHREMVKANRKRKEFEVFVGGLDKDATESDLRKVFSEVGEISEVRLMMNPVTKKNKGFAFLRYATVEQARRAVSDLKNPLVRGKQCGVAPSHDNDTLFVGNICKTWTKEHLKDKLKSYEVENFDDLILVEDSNNPGMNRGYALLEFSTRPEAMDAFRRLQKRDAVFGVDRSAKVSFADSYPEVDDEMMAQVRTIFLDGLPPSWDEDRVKKYLKKYGAIEKVELARNMPAAKRKDFGFVTFDTHDNAVACVDGITSSEIGEGDSKAKVRARLSRPLQRPPRMKHGLRGNFRIGQGAPRGGRFSYARPLPPRRPLPRFVRPDVSRLSPIRGRPLKRPIDIRDRRPVMSVPDRVRRLPPPERSYDRRPPAPVYPKRSPRREYGRRDDLPPPRSRATFADYSPRVPVDRRHSYRDDYSPRGSAYSDLGPRSAPRISDRRAYADDGYGGKIDRPLPTYREGRGRDYDTMAGSKRSYAEMDDVPPRYHDVSVRQSKARLDYDVGGSNARYADAYTERLGRSHAGYSTSRSVSGHDSVYSSSRHGMSYGGSASSGDPGGMYSSNFSADYMPRGSDVGGNSYSSLYSGRSTGSSGGYFGGSGSSSYY