Information report for BRADI_5g07505v3
Gene Details
|
|
Functional Annotation
- Encodes SR45, a member of the highly conserved family of serine/arginine-rich (SR) proteins, which play key roles in pre-mRNA splicing and other aspects of RNA metabolism. SR45 is a spliceosome protein, interacts with SR33 and the U1-70K protein of the U1 snRNP. Also involved in plant sugar response. sr45-1 mutation confers hypersensitivity to glucose during early seedling growth.
Homologous
- Arabidopsis thaliana — AT1G16610
Gene Resources
- Pfam: PF00076
- UniProt: A0A2K2CFS5
- EMBL: CM000884
- AlphaFoldDB: A0A2K2CFS5
- InterPro: IPR000504 , IPR012677 , IPR035979
- PANTHER: PTHR15481 , PTHR15481:SF0
- SUPFAM: SSF54928
- PROSITE: PS50102
- Gene3D: 3.30.70.330
- OrthoDB: A0A2K2CFS5
- STRING: 15368.A0A2K2CFS5
Sequences
gDNA Sequence
- >BRADI_5g07505v3
TGGCAGTGAGCAACATTGAACTGAAAGAGATCATCCAGGAGACTGAAACAGTCCTCGTAGATTGCCGCCGCAGCTCCCATAGGTGGAGTAGCAGAGGAGAGGGACTGCACCACGTCCATGGAATCGGAGTTAATCAGGACCCGGCTGTCAGCCTGAGAGCACAGCGAGCTCCAATCCAATCCTGACAGCATGGGCCCTCCGCCGCTTCAACATCCGCGACAAGTCGAGCTTGCAATTGGCGAAATGAGCTTTGTGAGCTTTCCGCTGGTTTAATTTTGAGTTTTTGAGTTTTTGACATTGAGTTGCGAGGGGGCCATTGCTGTCGATTCTATTCAGCGAAGGGCCAAAACAGCAAAAAATCCCTTCTGTCGCCCAGCCAGCCGGCCCGCCGCCGGGCACCGTTGTGGGAGACGATGGCGAAGCCCCGCCACGGTTCGCAGGCCACCGCGATCTCCCAACCCCGCTCATACTCCCCTGAAGTTGCCGTGCGCTGGTGAGAGCAGCCCTCACACGCTTTAGACCCGTTCCGTTCGCTTAGGGTTCTAGACTTGATTTCTGGTGGTGTTTGTTCTTAGATTCCCCTCTTTCTTCCCCGCCCATCCGCATACTTCTCCCTCTGTCTCTCCTCACCTTCTCAAATCTCTTCTCTGCTCTACCTTCTCCAGTGTCTCTGCGCCTCACCCTCCCGATTTGTCACCACACCCCATCCCGATGCCACCTAGCTACCTCACCGCCGTCGCGTGCCTCATCCATCACCTCGCTGTATTTCCAAATCCTGGCCTCCCGTAGTTCTCGCAACTTGCCCCTCCACCAAGCACGCTGGGCGGCAGACCGGGCGGCGCCCTGTCGAGCTGCGTCGCTGGCCTGCCCTGTCGTCTCCGCTCCCGTGGCAGGGCGTGCTCGGCGGTGGAGCGAGCAACACAGCTGCAGAGCCTAACTTGGAGAAGCTCGTCGTCCGTTGGCGGGAGGGAAGGTTCCGAGCCGGTCGTTGGGGGATGGGGAATCCTGGTCGCTGTGCTAGGTCTGTGGTGACCTGCACGTGCTAGTGCTAGATCACAGATCCGACGGCTGACAGTGCAGGTGGCGTGAGAGGTCTGGAGAGGTGCCCAGTTTTACTGTCCTAAATTTCAATTAAGTACTCCCTCTAATCCTAAGTTATTGTTGAAATATTACATGTATTTAGACGCCTTTTAAGAGTAGATACATTCATATTTGGACAAATTTGAGACAAGAATTTAGGGTCGGAGGGAGGAATTGGGTTATACATTCATAAATATTCAAGTCTGACCTTTTACTTTTGCAAATCCGTAGACTTTTGTTGAGTTTTGATTTGATTCTTTCCCAGGGCCTTTCTATCTATTTGAAAATTACCTGTATTGCAGTCATAGGACCACAATACCCCTTCTACTGCTTAGTTCTAGATGAAGCATTTGTTTCTTATATCAATTTTACTATCACTTTTTGTTGTTAGTACGGTGTCGACATTACAAACTGCACTGAACTTGTTCATCTATAAAGTCACCTGTTTACTTACACTTTATGCTTGATGCACATCAACATTGTTCCTTGGTTGTTTAATTTTATTGTGTCATGTTAGTTCTCTTTCACCTGAGCACATTTATTTATGGTTACTGTTGTATGTCCAGTTCATCTGGAACACGGGATAATCATTCATTCACTCCTAAAAAAGGTTCACCATCAAGGAAAGGTCACTCAACATCACCCCCGAGCTAAAAAAGCTTCACCTCCTAGGTATAAGATTGCAGAATGTATTTTATCCTTATTATGCTGGCACTACATTGATGCTTCTATGTTTTGGCATGTTGTTTGAACTTGTTATCATTTTGTCTCGCATAGAGTAGTTACTTATCAAGAAAACAAGGTATTTCTGGAATGCCAAGACCTGTCATATTTTGAGCTTTCAGCTCCTTTATGTTAGCATAATGCAAGTATAAGTGACATCTGAGATAATTTCTTAGTTTAGCTGACATACATCTACATGTGCTTCCTTAGTTGATTTACCATTTTTGCTGCCTGCATTTATGCAGAAAGTTCAATAACGCGTATGTAAGCTGCTTTTGGGCATTTGCTTCCCTTCATGGTTCCTCTACTAGGGATTACGTGTTCCAACATTTGTTTCAATTTCCCCTGAAATAACAACAGTAACTAAGCATCTCTCTCTTTCCCCTGAAACAACAACATTAACTAAGCATCTCTCTCGTTGCGCCCTGTGATATTATATTGGTGCTATTCGTTTCAGGAAAGCATCTCCTGCTCCTGAGTCGACTGTTCTTTTCGTTGAACCTCTATCACGGAATGTCGACGAGACTCGTCTGTACCAAATATTTGGTGAGTTAATCTTTTTGTGTGCTTCATTCTTGTTGGAGCTATAGTACGTACTGTTATGTTTTGAGCTATTATAATGAACTAGACAGGGAAATTGCATTTCAATAAAAATTTCTTGTTCTATGGTTACTTCCAACTGACCTATCCCTTCATATTTATATTTTGGTTTTCAATGTGATTTTTTTAATTTAATTTATGTTGTTCTGCTTATATATTAGGTCAAATCCTTTTGTATGTTGTATGAACTATTCAATTTTCGAGTTGGCAATTGCTAGCGGTACTCTAGTTTCCATGCAGTTGGTATGTTCCTGATTCTATATTAATGGACCAATCTTGTTCCGTTTTACTATGGACAAACAATCAATACACTTATACACATTGTTACCCAGCTTATGTTGTTCGGCACACTGGGCCCCAAAATGGTTGATACAATGCTAGGCTAGGACAACCTCAAGGTTGATATTGAAGTTGGTAAGAATTGTGCATGCTCTTACACTAGTTGAACAACTACAATTCCTTATTCTGTTGTATTGTTGGCTTCATGATATGAGGATTGGCACAATGGATAAAAGCAATGCTCGATTTTCAATTACTCTCCATTTGACATAATTGCAATAAGCAAAATACAAACAACATAATGAGTTCTATCCTCATTTTGCAGCATATTTTGGCGAGGTGGCAAATGTGCAGATACCAATGAACGAAACTGTAAGTGGATGTCATTGGCAATATCTGAGGAAGTTCTTGTTGACACATACTCTTCACTTATTTAATATAGGCTAATCTTCCACATGACTATGGATACATTCATTTCAAGAAGAGGGCTGATGCTGAGAGGGCTCTTCGCTACATGGATGGTGTATGCTTTCTGTACTACTATACTTTCTTTTTTTGTTTCCTTATGAGTAAATGACCAACAGCTTCACATCTTCCAGGGTCAAATTGATGGAAATGATGTTAAGTTGAGTTTCGTAGTAGCACCACAAAAACAAGATTCTTCATCTATGAACGCACACCCCAATGGTCCAAAAGCAGACGCTCCCCAGAATGATAAAGTACTCTTGCTGAAAAGGATGCTCAGCAACATCCTAGGGAACGTAAGCTTCTGAAGATTTTTATAGCTTATTAGTTTTTGATCAGATGTACTACCTCCGTTCCTGAATGTAAGTCCTAGTTTTGTCGTAGACCAAGTTTATAGAAAATTATATCAACACTAGAATATCACATACGTATACTATGAAAATATATATCATGATGGATTTAATAAAACTAATTTGGAGTCTTACATGTTGGTAACATTTTCTTCAAATTTGGTTAAAGTTTAAGAAGTTTGACTTAGGACAATGCCAGGACTTCTTACATTTAAGAACGGAGCGAGTAGCTTATTAGTTAGTCTGGGCCTACTGGTTCAGTGTACAGTGCTTCAAGAGGCACTTCTCTTTGTAGCTTTGGATGATTTAACCTATTACTTTCCTGCCAGCAGCATCTTCGCCAAGAAAAGAACCTTCTCCTTTGCGAAAGCGGTCTCCTCCATATCAAAGGGTTGAGGCACCCAACAGTCAATCTCCGAGGTGTCGTGCTAATTCTCCTTCTTTTTGTCATCACGCAGACCCGTACTTTGTCAGGTTTGGTGACATGAGTCT
CDS Sequence
- >BRADI_5g07505v3
ATGGCAGGGGCCATTGCTGTCGATTCTATTCAGCGAAGGGCCAAAACAGCAAAAAATCCCTTCTGTCGCCCAGCCAGCCGGCCCGCCGCCGGGCACCGTTGTGGGAGACGATGGCGAAGCCCCGCCACGGTTCGCAGGCCACCGCGATCTCCCAACCCCGCTCATACTCCCCTGAAGTTGCCGTGCGCTGTTCATCTGGAACACGGGATAATCATTCATTCACTCCTAAAAAAGGTTCACCATCAAGGAAAGGTCACTCAACATCACCCCCGAGCTAAAAAAGCTTCACCTCCTAGAAAGTTCAATAACGCGAAAGCATCTCCTGCTCCTGAGTCGACTGTTCTTTTCGTTGAACCTCTATCACGGAATGTCGACGAGACTCGTCTGTACCAAATATTTGCATATTTTGGCGAGGTGGCAAATGTGCAGATACCAATGAACGAAACTGCTAATCTTCCACATGACTATGGATACATTCATTTCAAGAAGAGGGCTGATGCTGAGAGGGCTCTTCGCTACATGGATGGTGGTCAAATTGATGGAAATGATGTTAAGTTGAGTTTCGTAGTAGCACCACAAAAACAAGATTCTTCATCTATGAACGCACACCCCAATGGTCCAAAAGCAGACGCTCCCCAGAATGATAAAGTACTCTTGCTGAAAAGGATGCTCAGCAACATCCTAGGGAACCATCTTCGCCAAGAAAAGAACCTTCTCCTTTGCGAAAGCGGTCTCCTCCATATCAAAGGGTTGAGGCACCCAACAGTCAATCTCCGAGGTGTCGTGCTAATTCTCCTTCTTTTTGTCATCACGCAGACCCGTACTTTGTCAGGTTTGGTGACATGA
Protein Sequence
- >BRADI_5g07505v3
MAGAIAVDSIQRRAKTAKNPFCRPASRPAAGHRCGRRWRSPATVRRPPRSPNPAHTPLKLPCAVHLEHGIIIHSLLKKVHHQGKVTQHHPRAKKASPPRKFNNAKASPAPESTVLFVEPLSRNVDETRLYQIFAYFGEVANVQIPMNETANLPHDYGYIHFKKRADAERALRYMDGGQIDGNDVKLSFVVAPQKQDSSSMNAHPNGPKADAPQNDKVLLLKRMLSNILGNHLRQEKNLLLCESGLLHIKGLRHPTVNLRGVVLILLLFVITQTRTLSGLVT