Information report for BRADI_4g33727v3
Gene Details
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Functional Annotation
- JMJD5 encodes a protein which contains a jumonji-C (jmjC) domain. The jumonji-C is frequently found in proteins with histone demethylase activity. jmjd5 mutant plants have a short-period circadian phenotype.
Homologous
- Arabidopsis thaliana — AT3G20810
Gene Resources
- Pfam: PF13621
- UniProt: I1IR93
- RefSeq: XP_014758878.1
- EMBL: CM000883
- KEGG: bdi:100831374
- OMA: KASYQEC
- InterPro: IPR003347 , IPR041667 , IPR056520
- PANTHER: PTHR12461 , PTHR12461:SF105
- SUPFAM: SSF51197
- PROSITE: PS51184
- Gene3D: 2.60.120.650
- OrthoDB: I1IR93
- eggNOG: KOG2132
- STRING: 15368.I1IR93
- HOGENOM: CLU_016785_0_3_1
Sequences
gDNA Sequence
- >BRADI_4g33727v3
TATTTTCTTGTATGTCCACACCGGAACTGAATATGAACCTTAAAGGTTTATACGTACTTACAGGACAGTTTTAGGTTTTCTCCAAGGAGCAATGCTGCACATGCGACAAAATTTGCACGATTTAGTTACAATTTGACTAAGAAATTAATCCCCACTTGATTCACTCTTATCGTAACAAATCTTTCTACCTGAGGCACTTCTGTTCTCTAAGAAGTAACACTTACGGTTACGGGTTACAGGACTTTGGAAAATGGATCAGTCCTTCAATCTCAACCTCCCGAGGGTACAGAATGTAAATCACCATTACATGTGGTATGCATCAAGTAACAATGTTCACGTACAATAGTACATATGAATACTACATGTGGTCAGGCTTACCAAGTTCCTGAATCCTTAAGCCTGGTCCTGATGTACTACCAAAGATCAAATGTTGGGCGCTTGAAGTTGCAAGTGTTTTACGCCACCAAAAGCTAATGGAGAAACTAATAGAAAGTGATCTGACATAATGCCACCATTTTGGTGGAATGTAGAGCAGGTCACCCTCCTCCAATATGCAGTCCATGAAATCAAGGTTTTCTACCCTTGGGAACTCCTTCAGATCTATGTTGTCAAGATCTACCTGCAGAGGCATTTATTAGCACAAATATAACACCAAAACCTTATGGCTTCATTTGCACAGTCACTGTATTGTGCAAAACCCAACAAAAGTTGTAAGAATGCATTTTTTTGTAATGGAAATTATGAGGATAAATGGCAGTATGAAGCAGTAAGGAACAGGTTCCTTGAACCTGTGTCTGCATATTAACCTAACTACTACTCCCTCCGTTCCATAATTCTTGTCTCAAATTTGCCAAAAAATGGATGCATCTATTCCTAAAAAGCGTCTAGATACATGTAATATTTCGACAAGAATTATGGAACGGAGGGAGTACTTACCAAAGCATCAAAGTTGCTCCAAAGTAGAAATATATCTAGACACAGAAAACTGAGAAAGCACAGCTCCAAAACAATGGACAAACAGCCGTAGACAAAAACAAAGTAAAAAAGTGGAAACTAGAACTTTTCCAAATGTAGCACAAAAAATCCAGTTAAAACTTAACACTAGCTCCAGTTTGCAATGCTATGGTTAAGATTCATGAAAAGAGAGTACTACTAATGCAAAAATGAAATCTCGGGCATTTTAACTCTATGGAATCTCAGTATTTCGAGTCTTTAGCTGTGATTTCTGGGGGGGGGGGAATATTTTGTTGCCAAAACGACATGTACCGCTGTGAAAATCTGCAAGTTTATTCTTCATTTCCAACGTGTAGCAAGTTGGAACAGATTGTGTATACCTGACTGGTATTGCTTAGCATAGTTTCTGTGTGTGGGTACAATTCCTCAGATACTGAACCAGGATAGAGTCTAATATACTTCCTGCCCAAGACCTGGTGGAGAAAATTTATTAACCAACAACTGCTGATAAAGTTACATTAAGGAAATACTAACAGGCTATGCGCAAAAAAGAAGGAAGTACTAACAGGCAGTCATCCAGAAATATACTAAAAGGTTCACAGTTGAACAAATGAAGCCACCGAACTACATGTAGATCACCATGCAGCAGAACAAATTTCTAACACTAAAATGTTCACAAAATCATCTGAGTTCTTGGCTTGAAGTTTAAAGCCCTTTACAATTTCAAGAGAGAAAATATTTTGTACCATAAATGTCTGTTCAACAATGGAGCATGTATCACAATGTTCAAGCAACCCAGCTGATGAAGCATTTTAGGTAGTCCTATATTCCTAGCTCAAAGTGCCATTTGCGATGACATATAGTGATATTGATAATTTGCAAATTTAAGCATTTATATAGATGCCACATTGGAATAACAACTAAATGGTGATGCATGAAGCCATGGAAACCACAATATGCGGAGTTACTTTTATACAAACCGACAACTTAGAGAAAAACAGTTCAGCTACTAAAATAAACACGTGACAAAACGACACCATTTACAAGACATTTACAAGATAATATAAATATTTCACATCAAATGGGTGATTAGAGATTTCTTCTTGCAAAAATGTCAGCACAAGATTCAAACTACACGAACAGCAACTGTTGTTGTTAATTCTAGAAACGAACAAGGAGAACTGAAAACAGCACTCAGGTTATACCTGAGCTAAAATATTGTGATGTGGGTCGTGGTGCAATGGTGTCACTGTTCCGTGTGGACCAAACCAAGCATTAAGTGATTGGAGTTCCCCTCCACCAGCATAACAGTAGTCAGGAACCATTATGTCTTCTTGGAGCTCTTTTATCTGCCAAATGTCATTAAGTAAAATTTCACAACTGAACTAAGAGATTTACTAGAGAATCAACAATGACAGCTTCCACCTGCTCAAACAACGGATGCTGAGCAAGATATGTCAAATTTGAAGGACAGACAGTTGACCACATCCTCTCAAGGAACTTGGAAAAGGTGATTAGCTCCTGCTTCCAATCATTACACACATAACTCTTTCCAACCTGACAGAATCAACTATATCAGTGCACCAAAACCATTAGGTAACCAATACCAAGGAGAAAATAATACTCAAAATATTCCTTCTAAACTGTCAGCTAAGCATGGGTTCTAAAAATTACTAGAAGCAAGCAACATACAAACTTGTGTTGCTCATAGTGAACTGCACATGAATAGGTAGCAACCCTAATTTTCAGATTGTCGTTAACAGGACACAATTTTTCAAAACTATGCTACTCTGCTAACAATATCAGGAAAAATTCCAACATATATAATTCTTATAAATAACAGCAAGGTTAAGAAAGATGGCACACCGATGCAAGCAAAAGTATAGCAAAGTGAAACTGCTATACATGTCAAAAGCCTATGGAATCACATTGGCTAAACTTTTCAGAAATAAATCCCTGTTAGGGCTTTAAAGTAACATGTAAGCAAAACACTACACACAAGAACAAAGGCACTTTTTCAGAAAGAAGTCCCTATGGTTAGGGCTTTAAAAGTGACATGGGAAGTAAAATGCTGCACACAAAAACAAAAGGCAACAATCTCAAAACTGAAAGAAACAAATGCGAACAAAGAAGTTTAAAAGTGATTTTACCTAGAGTACTGAATGTCAAGGAAATAGACACGTTGCGAACCAAAAAAATAGGGGGTGTATCATATTTCTTAACATAGAACATACTGAATATGCAAGTTGTGTAATATAGTGTAAACACACATGTAGCATACAATATTGCTTAATTTTACTTGATACTATTTGTATTTGACATAAGCCTGCTGAAAATTAATTTTTCATGTATGTAGGGCAATTTTACAAATAACCAATATTATTGGGTAACAAAGACGATGCAAGTATTTGCTATATATCAGCTGAAAAGGGCACGGAAGTAAGCTCTACAAACTATTTCAATGATATTTGAGATCAAATAATAGCATTGAACCATCAGGTTTAGATGCACTTTTCTATTAAGAAAAGTGAAACCATATATCAACTCAAAGAGGGATGAGATAAAATTAACGTAATAGAAACAGCTTGTCTAGAAGCAGTTACTTCAACAGGAACAGTCCGATCTCCTGCGATCCTCTTTAGGTACTGAATATCCTTCCATTTTGTCATTGCGGGCCAATGATTGATGCAGCCACTGATTATAACAGGGGACTCACGCAAAAAGTAATCACATATAAACTCCTCCAAAGATATGCATGATCGTCTCTCGATTTCCTTACAAGATAAAGACTTCTTCGGAAGAATTTTGAGTGCCTGTGACAAAATATTGTTAGCAGATATACAGCAAATTCAGAAAACAAGGATTGTAAATGTCCTTATCAACACAACAAATTCAGAAAACAAGGAAGGAATGTGGTAACTGGAACCAGCGTTAACACCCGTTACAGACAATCTGCACCAATTATTCCGGTCAAATACCTGCAAAACTCCTGGCATTATGCACCCTAATAATGACAATGTGACACTGACACATCAGTTCATGTGCATTAAGTGTTTAAAATGGTGCTTAATCTAGTAATATAAGATCTTCAAACAGAGAAGCCATATACATAGCCTAATCTAGTATAGTATTCATTACTCCCTCCGACCCATATTACTTATCTCAAATTTTTCCAAATATGAATGTATCTATGTTTAAAAAGTGTCTAGATACATGTAATATTTTAACAAGTAATTCCAGCAGGAGGGAGTAGTATAAATTAGAGTCTTATATGAGACATTGAAAATTAGCCATTCTACAACAAGGCCCTAAAAAAATTAAGCTCAGTTAGTAGATGTATTGACCACCGTAAGCTCGAAAACACACGCACGAAATCTTACGAAGGCAGTAGCGGTCTCACATCGGCGATGTCTCGGTTCCTGTCGAGCCCTTCCCTCCACCTCTGGGCTTCTTCGCCGGTCTCCGCGCCGTCGCCGTCACTCGAGTCAGCCACTATCCGGGCCACGGCGTCCTCGAGGTCGGCCCGGAGGAGGTTCCCTCCCATGATGAGCCCCATGTCGAGCGCCCGGAGCGCGGCGCGGCGGTCGGCGGCAGCAAGGCGGAGCCGAGCGACGTGGAGGCACGCCAGCGCGTAGGCGTCCCTCCACGCGTGGCCCACCTCGCTCCAGGGCCCCGAGTGGAGCTGCTCCCACGCCATCTCCCGCGCCGCCTCCGCCGCCCGGAGGTCGCCCGCCGCCGCCTTCTCCGCCGATGCCGCGAACGCGAAGCCCCCCTCCCCCGTTATCTCGCGCAGCAGCGCTGCCCGCCGCTCCGCCTCCGATTCGCCGCCGGCCATCGGCGGAGGAGCAGGGGTTGTGACGTGTCGAGGACCCGCAGCAAAAGTGCAAAAGCGAAGGAGATATTTCTCTGGCTCCGGCGTGGCTGCTCGGGATATTTCTCCCGTGGTCTGAGTGTTCTGATC
CDS Sequence
- >BRADI_4g33727v3
ATGGCCGGCGGCGAATCGGAGGCGGAGCGGCGGGCAGCGCTGCTGCGCGAGATAACGGGGGAGGGGGGCTTCGCGTTCGCGGCATCGGCGGAGAAGGCGGCGGCGGGCGACCTCCGGGCGGCGGAGGCGGCGCGGGAGATGGCGTGGGAGCAGCTCCACTCGGGGCCCTGGAGCGAGGTGGGCCACGCGTGGAGGGACGCCTACGCGCTGGCGTGCCTCCACGTCGCTCGGCTCCGCCTTGCTGCCGCCGACCGCCGCGCCGCGCTCCGGGCGCTCGACATGGGGCTCATCATGGGAGGGAACCTCCTCCGGGCCGACCTCGAGGACGCCGTGGCCCGGATAGTGGCTGACTCGAGTGACGGCGACGGCGCGGAGACCGGCGAAGAAGCCCAGAGGTGGAGGGAAGGGCTCGACAGGAACCGAGACATCGCCGATGCACTCAAAATTCTTCCGAAGAAGTCTTTATCTTGTAAGGAAATCGAGAGACGATCATGCATATCTTTGGAGGAGTTTATATGTGATTACTTTTTGCGTGAGTCCCCTGTTATAATCAGTGGCTGCATCAATCATTGGCCCGCAATGACAAAATGGAAGGATATTCAGTACCTAAAGAGGATCGCAGGAGATCGGACTGTTCCTGTTGAAGTTGGAAAGAGTTATGTGTGTAATGATTGGAAGCAGGAGCTAATCACCTTTTCCAAGTTCCTTGAGAGGATGTGGTCAACTGTCTGTCCTTCAAATTTGACATATCTTGCTCAGCATCCGTTGTTTGAGCAGATAAAAGAGCTCCAAGAAGACATAATGGTTCCTGACTACTGTTATGCTGGTGGAGGGGAACTCCAATCACTTAATGCTTGGTTTGGTCCACACGGAACAGTGACACCATTGCACCACGACCCACATCACAATATTTTAGCTCAGGTCTTGGGCAGGAAGTATATTAGACTCTATCCTGGTTCAGTATCTGAGGAATTGTACCCACACACAGAAACTATGCTAAGCAATACCAGTCAGGTAGATCTTGACAACATAGATCTGAAGGAGTTCCCAAGGGTAGAAAACCTTGATTTCATGGACTGCATATTGGAGGAGGGTGACCTGCTCTACATTCCACCAAAATGGTGGCATTATGTCAGATCACTTTCTATTAGTTTCTCCATTAGCTTTTGGTGGCGTAAAACACTTGCAACTTCAAGCGCCCAACATTTGATCTTTGGTAGTACATCAGGACCAGGCTTAAGGATTCAGGAACTTGGTAAGCCTGACCACATGTAG
Protein Sequence
- >BRADI_4g33727v3
MAGGESEAERRAALLREITGEGGFAFAASAEKAAAGDLRAAEAAREMAWEQLHSGPWSEVGHAWRDAYALACLHVARLRLAAADRRAALRALDMGLIMGGNLLRADLEDAVARIVADSSDGDGAETGEEAQRWREGLDRNRDIADALKILPKKSLSCKEIERRSCISLEEFICDYFLRESPVIISGCINHWPAMTKWKDIQYLKRIAGDRTVPVEVGKSYVCNDWKQELITFSKFLERMWSTVCPSNLTYLAQHPLFEQIKELQEDIMVPDYCYAGGGELQSLNAWFGPHGTVTPLHHDPHHNILAQVLGRKYIRLYPGSVSEELYPHTETMLSNTSQVDLDNIDLKEFPRVENLDFMDCILEEGDLLYIPPKWWHYVRSLSISFSISFWWRKTLATSSAQHLIFGSTSGPGLRIQELGKPDHM