Information report for BRADI_4g10930v3
Gene Details
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Functional Annotation
- The protein is composed of repeats of WD motif which is involved in protein complex formation. The gene is involved in flower timing and flower development. This gene is predicted to encode a protein with a DWD motif. It can bind to DDB1a in Y2H assays, and DDB1b in co-IP assays, and may be involved in the formation of a CUL4-based E3 ubiquitin ligase. Loss of gene function leads to a redistribution of H3K4me3 and K3K36me2 modifications within genes but not a change in the overall abundance of these modifications within chromatin.
Homologous
- Arabidopsis thaliana — AT4G29830
Gene Resources
- Pfam: PF12894 PF00400
- UniProt: I1IJL2
- RefSeq: XP_003577267.1
- EMBL: CM000883
- KEGG: bdi:100833314
- OMA: LDSSMCL
- InterPro: IPR001680 , IPR015943 , IPR019775 , IPR020472 , IPR036322 , IPR051510
- PANTHER: PTHR44090 , PTHR44090:SF1
- SUPFAM: SSF50978
- PROSITE: PS00678 , PS50082 , PS50294
- Gene3D: 2.130.10.10
- OrthoDB: I1IJL2
- CDD: cd00200
- eggNOG: KOG4155
- STRING: 15368.I1IJL2
- HOGENOM: CLU_000288_57_11_1
Sequences
gDNA Sequence
- >BRADI_4g10930v3
AGTATTTTTCCAATGGAGGGAGTAGATTGAAAACATACATGACTGAGCACGGTAAAAGGCAAAAGCTGTTTACTGGAAATTGAAATAAACAGAGTTTTCATCACTGGCAAGGAAAAGATGAGTTTACAACTAGCCTTCTTCTAACCACTAGCCCGCCTGTTCAACTTGCAAGTTAGAGATTGATCAGTCAGCATTATACAAGTTATCCAGCCTTCATTGCCAGATAGTTGCCGGCTGTAGAACACATGATAAAATCTGAGGGTGGTACTGCGGCTTGCCAATCCATAGAACTACGAGTAATCATATAGGGAGATGCTCTTGTCGTCCGAGGCGCTTGCGAGGCGGCCTGCACGGACTCCTTCGCCTCCTGGCGGCCTGAACGCTACAGCCCAAACTTGGTCAGAGTGGTTGCTCATCGTCTGCACTGACGCCCTCGCGTTGATGTCCCAGAGCCGGACGGTGCGGTCGCTAGAGCCGGTTGCCACCGCCATGCCATCTGGGCTCACGTCAATGCTCAGCACCCAGCTCGCGTGCCCGGACATGGCCCCGATGAGGCCCTTCTCCTTGGCATCATATATGTGAATGTGGGCGTCGTCGCAAGCCGTGAAGAGCACATGGGGATCCACTGGAGAGAACACCATCGACCTCACTGGCATATGGTGGCCCTCCAGGTGATGGAGGAACTTCATGCGAACAGCATCATACACCGCGATGGTGCCATCCATGGATCCGCAGGCTAACAGCTTGCCATCTGGGCTCCAAGCAACTGAAAGAACAAACTTGCCGCTGCCTGTTTTATCAGGGCGAGCTCCCTCTGGACGAGGAACGGGAAGGCTCGCAATAGGCTGCCACTTCTCTGTGTCCCAGAGTTTCACTGACCCACTGCCACCACCAGCAGCAGCCAGAGCAACACCCTGACAAGGAAAGCATATGATAGATCTGTTAATAAATTGGACCTGAGTATCCAAATTGACAGCGATTCCACTCTAAACTGGAAAACCAGGACAAGACATTCACAGTTAGCCTTCACATGTGCTAGTTAAAACTATTGGTTACAGCACCACAATGGAGTATATTGGTAGTCAAGGTTTCAGACATAGCTGCATATGTTGATTACAGTCAAACATGGTTTCTAGAGGCAATAACACATCAGAGAAGACTCAGGTGTCAACAGCTAGCCCACTAATACATATTCACTGCATACAGAAACAGAATCAAGTGAAACTAGTCGTTGACCATGCAAGCTTGGACATGGTACCACTGAATTAGAAATGCTGGTCTCCAAACATAAATAGAGCAAAACATGCTCATAAAAAGAAATATGTAACAGAAATTACTTAATCAACTAAAGGCTGTATGTGCAATTTCGAACAAGTAGGTGAGCGGCATAAGAAAATTATCACCTTAATTTACTGAACAGAGTCATGCAGAAAGCATGATACAACATCAACTTCACAATTTTCAAAATACTCCTATAAGTTAATACTAAGGTGAATTACAAAAAACCAAATGCACAGCTTGCCAACAATGGTCTATTATCACAATGTACTTCGATCCTTCTCTAATAAACATATCTTACTGAAGTTAATGCAATTTTGAAAGCAAGTGTGGAAGTTAAAAAAATATGTACCACAATGAACCATAAGCAGATAAGGAAGGCAAGCCATAACAGTTCATGCTTGCTTTCCTAATTTAACTACTGCAAACCTACCCTGCTAAATCATTTTGTAACGTAATCATGTAACAAACTTCACCAGTACTTCACAAAATCACTAGTCCTATTTCTTTCTCACATTTTTCTTTCGAAGCCAAAAAACCCACCAGGAAATGCCAAACAGGCCACAATTTTGTGATGGCATCCAAATACTGAAAACAGAATCTGATCACATCTCTTAAATTTCCACCCCTCAAGTGAACTTACAGAAACCACAACAGAATTACGGTTAGTACTAAAACCACATCAAAAACCAAATGAGGGCCACATTTTACACGCAGCGTATGCTCAATTCAGACAAAACTTAAACTACCATTGCACCACACTACAATCCCGCATCTCCCCTACCAACCAACCCAACCCACCTCGCAATCGTAACCTGCAAGCAAAGCAGGATAAACCCCAAAACTTTCTGTCTTACCTTGGGGTGGAACTGGACGCCCCAGACCTCAGACGGTGGCGCGTCGAGCGTGGCGACGGAGGCGCCGGAGTCGACGTCGAAGACGCGGATATAGCTGTCGAGGGAGACGGCGGCGGCGATGACCCCGGCCGGGTGGGCGGCAAGGGATACCACCCCGAGCGCGTGGCCCCGCGCCGGCGGCGACGCGGCGGCGAGGTCGTCGGCGCGCCAGGCGCGGACGGTCTCGTCGAGCGCGCCCGTGAGGAGCAGCGCCGTCGGGCGGTGCTCCGCCGCCGGCGCCCACGCCGCCGCCCACACCGACTCCTCGTGCGCCCCGTCCACCGACTTGAGCCCCGCAAGCTTCATCTCCGGCGATGGCGATACGGCGGAGTGGGAAGGAAACCCTAGGGCGTTTGATCTGGCTGGGGAAGGGGAAGGGGAGAGGAAGGGGTTTGGAGGAGAGACGAAAGAGGCC
CDS Sequence
- >BRADI_4g10930v3
ATGAAGCTTGCGGGGCTCAAGTCGGTGGACGGGGCGCACGAGGAGTCGGTGTGGGCGGCGGCGTGGGCGCCGGCGGCGGAGCACCGCCCGACGGCGCTGCTCCTCACGGGCGCGCTCGACGAGACCGTCCGCGCCTGGCGCGCCGACGACCTCGCCGCCGCGTCGCCGCCGGCGCGGGGCCACGCGCTCGGGGTGGTATCCCTTGCCGCCCACCCGGCCGGGGTCATCGCCGCCGCCGTCTCCCTCGACAGCTATATCCGCGTCTTCGACGTCGACTCCGGCGCCTCCGTCGCCACGCTCGACGCGCCACCGTCTGAGGTCTGGGGCGTCCAGTTCCACCCCAAGGGTGTTGCTCTGGCTGCTGCTGGTGGTGGCAGTGGGTCAGTGAAACTCTGGGACACAGAGAAGTGGCAGCCTATTGCGAGCCTTCCCGTTCCTCGTCCAGAGGGAGCTCGCCCTGATAAAACAGGCAGCGGCAAGTTTGTTCTTTCAGTTGCTTGGAGCCCAGATGGCAAGCTGTTAGCCTGCGGATCCATGGATGGCACCATCGCGGTGTATGATGCTGTTCGCATGAAGTTCCTCCATCACCTGGAGGGCCACCATATGCCAGTGAGGTCGATGGTGTTCTCTCCAGTGGATCCCCATGTGCTCTTCACGGCTTGCGACGACGCCCACATTCACATATATGATGCCAAGGAGAAGGGCCTCATCGGGGCCATGTCCGGGCACGCGAGCTGGGTGCTGAGCATTGACGTGAGCCCAGATGGCATGGCGGTGGCAACCGGCTCTAGCGACCGCACCGTCCGGCTCTGGGACATCAACGCGAGGGCGTCAGTGCAGACGATGAGCAACCACTCTGACCAAGTTTGGGCTGTAGCGTTCAGGCCGCCAGGAGGCGAAGGAGTCCGTGCAGGCCGCCTCGCAAGCGCCTCGGACGACAAGAGCATCTCCCTATATGATTACTCGTAG
Protein Sequence
- >BRADI_4g10930v3
MKLAGLKSVDGAHEESVWAAAWAPAAEHRPTALLLTGALDETVRAWRADDLAAASPPARGHALGVVSLAAHPAGVIAAAVSLDSYIRVFDVDSGASVATLDAPPSEVWGVQFHPKGVALAAAGGGSGSVKLWDTEKWQPIASLPVPRPEGARPDKTGSGKFVLSVAWSPDGKLLACGSMDGTIAVYDAVRMKFLHHLEGHHMPVRSMVFSPVDPHVLFTACDDAHIHIYDAKEKGLIGAMSGHASWVLSIDVSPDGMAVATGSSDRTVRLWDINARASVQTMSNHSDQVWAVAFRPPGGEGVRAGRLASASDDKSISLYDYS