Information report for BRADI_3g58720v3
Gene Details
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Functional Annotation
- Encodes a homolog of human Lysine-Specific Demethylase1. Involved in H3K4 methylation of target genes including the flowering time loci FLC and FWA. Located in nucleus. Negatively regulates root elongation. Involved in repression of LRP1 via histone deacetylation.
Homologous
- Arabidopsis thaliana — AT1G62830
Gene Resources
- Pfam: PF01593 PF04433
- UniProt: I1IF20
- EMBL: CM000882
- KEGG: bdi:100821112
- OMA: SSRGEMF
- InterPro: IPR002937 , IPR007526 , IPR009057 , IPR018247 , IPR036188 , IPR036388 , IPR050281
- PANTHER: PTHR10742 , PTHR10742:SF381
- SUPFAM: SSF46689 , SSF51905 , SSF54373
- PROSITE: PS00018 , PS50934
- Gene3D: 1.10.10.10 , 3.50.50.60 , 3.90.660.10
- OrthoDB: I1IF20
- eggNOG: KOG0029
- STRING: 15368.I1IF20
- HOGENOM: CLU_004498_5_0_1
Sequences
gDNA Sequence
- >BRADI_3g58720v3
CCGAGTCCCAGACCCCCTTCGCCCTGCACAGTTCCGGCCCTAAACCATCCCCTGAACCCTCCAAATTCCCCAAATCCTCCTCCGCTCCCACCCGCCGACCTCGCCGCATCCCGAAACCTCGATGGATATGGAGGAAGGCAACGAGGCGCAACCACCGCCGCCGCCACAGGAAGCGCCCGAAGCAGCGGAGCCGGTTCCGATGGACCAAGACGAGGACCAGGCAGCCGCGGATCCCATGGAGGACGAAGCTGCGGGAGGAGATGCCGCGGCGGCCGTGGATCCCATGGAGGACGACGCGCCTACATCCTCCCCAACCCCGTCCGCCCCCTCCGCCACCGCGGCCGTGGACGACTCCACCGTCGCGCGGAAGCGCCGCCGCCGCAAGAAGCAGTTCCCCGGCATGATCCCCACGGCCGGCGTCCGCGTCCTCCGCGCCTCTTCCTCGTCCGCGGCGACCGCGGCGCATCTCACCGGCATCCCGCGCCGCCGTGGGCGCCCGCCGACCAACAGCCACGTCCGACAGGCTCGAGAGCTCGATTCCGAGGCCCTCATCGCCCTAGCTGCGGGATTCCCCGCTGATACTCTCTCCGAGGACGAGGTCGCCGCCGTCGTCATCCCAACCATAGGTGGCACCGAGCAGGCCAACTACCTCGTCGTACGCAACCACATTCTCGCGCTCTGGCGCTCTAATCCTCTCTCGCCCGTCTCATCCAACGCCGCGCTCGCAGCCATTCGTACCGAGCATGCCCCCCTTGTCGCCGTTGCACACTCCTTCCTGTCGGACCATGCCTACATTAATTTTGGCCTCGCCCCCTCCATTCTATCCCTCCCCCCATCACCCCCTCCATCCCTTCCTCCCCCTTCTGTTCTCATTGTCGGTGCTGGCTTTGCTGGCCTCGCCGCGGCACGCCACCTTATGTCCCTTGGATTCAAGGTTGCCATTGTCGAAGGACGACTCCGCCCAGGTGGTCGCGTGTTTACAAAGACAATGCGCTCCACTGCTGCAGACTATCCTGACATTGCTGCTGCTGCTGATCTTGGAGGCAGTGTGCTCACCGGTATCAATGGGAACCCCCTCGGTGTCATAGCACGGCAGCTTGGGTTCCCACTCCACAAGGTGCGGGACAAGTGCCCGCTGTATCTCCCGAATGGCAGTGAAGTCAACTCCGACATGGACGCTCGAGTTGAGGCTGCCTTTAACCAGCTTCTTGACAAGGTGTGCCAGCTGCGGCAGGTGGTCGCAGATAGTTTCCCACATGGCGTTGATGTGTCGCTTGGTATGGCACTTGAGGCATTCCGGGCGGCGCATGGTGTTGCCGCTGAGCCAGAGGAACGAATGCTTCTTGATTGGCATCTGGCAAACTTGGAGTATGCCAATGCTGCTCCTCTTGCCGATCTCTCAATGGCCTTCTGGGATCAGGATGATCCATATGAAATGGGTGGTGACCACTGCTTTATTCCTGGCGGTAACTCCCAGTTTGTGCGAGCACTTGCTGACGGCATCCCGATATTCTATGGGCAGAATGTGCGAAGGATACAATATGGGTGCGATGGTGTTATGGTGTACACTGAGAAGCAGACATTCCGTGGTGACATGGCGCTCTGCACTGTTCCCCTTGGTGTGCTTAAAAAGGGAGACATCGATTTTGTGCCTGAGCTGCCAGCTCAAAAGCGAGAAGCTATCCAAAGATTGGGCTTTGGTCTTCTTAATAAGGTTGTGATATTATTCCCCTTTGACTTCTGGGATGGCAGGATTGATACATTTGGGCACTTGACAGAGGACTCTGCTCAACGTGGCGAATTCTTCCTGTTCTATAGCTATTCTTCTGTCTCAGGAGGGCCACTGCTTGTCGCGCTTGTTGCTGGGGAATCTGCTATCGAGTTTGAGAAGAAATCACCGATGGAAAATGTCGAGAAGGTGTTAGAAACACTTAGGAAAATCTTTTCACCCAAGGGGATTGAGGTACCAAACCCATTGCAGGCAATCTGCACTCGGTGGGGCACTGACAGGTTTACATATGGATCATATTCATATGTTGCTATTGGGTCTTCTGGTGATGATTATGACATTTTGGCTGAGAGTGTTGCTGATAGAATTTTCTTTGCTGGAGAGGCAACAAATAGGCGATACCCTGCAACAATGCATGGAGCTCTGCTTAGTGGGTACAGAGAGGCTGCCAATATTGTAAGAGCAGCTAGGAAGAGAGCAAATAAGGTTGACTCACCTGAGAAAACAGATGTTAATTTTGAAGTCAAAGATACTGATAAAGATGACAACATCGATTTGGATGATCTCTTCCGTACTCCTGATGCTGCTTTTGGTGGCTTCTCAGTTCTCCATGACCCATCTACATCTGAACCTGATTCAACTTCGTTACTGCGTGTTGGAATTGGTGCCCGAAAGTTAGGCTCTGGTTCACTTTTCCTCTATGGCTTAATAATGCGAAAGAATGTAGCTGAGTTAGCTGCAATGGAAGGCGATGAGCAGCGTTTGAGTACCCTGTATCGAGATTTTGGGACAAAACTTCTGGGATTGGATGGCTTGGGTCATACTGGGGAAAGCCTTATATCACGGATAAAGGCTGCTTCTAAGAAGTAGCATCCAGTCAAGATGTTGGAAAGGTTGACTTGCCTGTAATAGTTGTCAGCTCTGAGCATTTAGTTTGCTAGCCCGGCATGGTTGCTGAACTTGCAAGTAATTCATTCATTTCATTGATTGCCTTATACCTCTTAATTTCTCGTCAAAGGTGTATGCTGTGCCATGTTGTACTGGTAAAACCTTCTATGATCATATCACCATGGGAAATAATGGAAGATTCTAATCAGTACTATCTTCAGACATAAATCACCTCTTTTGACACTTCTGTGATGACATTGTTAATTAGCTTAGTATTATCATTTTTTATGTGATGTAGCACTTGGTAGCGTCAGTTTACCCAAACTAACTAGGGATATGTGAGCAAGAAAAGGATGTGAGAGTTCCTGCTAGTCCCAATAACATCTACATTTGGGTGTGGTGATAGATAATCAACGATTCTCGTTCCTGTTAGGCTTGTTTTAGTGATTTGTCATTTGGGGTTCTGGGTTATATTTGACAATTCTGTCTCATTGATTACATGTTAGTTCTTTATTCTGGAAGGTGGTTTTGTATGATTTGCAAGGCATTTCAATGTTGATTATTCATTTTCTTCAGCAAGCTGTAGCTAAAGGATCATCTAAGTGACAGATCAAGAATAGTTTGATAAAACTATCAGGAGGTTATCCATTATTTCACCGCACGGCCTATATTTGAAGTTTTTGGAATAAATTGTTTATGGTGTCAAGCAGGTAATGCCATAACTGACATTTTGATGCCCTAAACATGATTTAATAAATGTAGTCCTTGGGCTGTCCAATTGAACCCTATTGTATTTTATTTTTGTCAAATAGGTATGACATATGTTAAAATTTACATGCTTTGATGCAGAGTGCATGTTTCTGTTTGACCCTTGAAGATGTTGCATTGGTTGATAGTTGTTTAATTTTTTTCAGCTGTGTCATGTCATGTCTCCTCCAGCGTGCGCACCTTGCTTTAGGCTTAAGCTCAAAATTGTCCAACTGTAGAGTGGAAGCTCGAGCCAAAAACACAGGCTGGATTTGGACTCTTTTCTTCAGCACTTCCTTAGTTTGGCCTCCTTGCTATGTTCCCTTCATATCACCTTTTTGCACATTTGAGATTAGTGGAAGGTGCCTCCTGCGCTGATTTCTTAACGAACCTATGCTTATTTGCTCGTGTATTGTTTTTATATTTTGTATGCGCTGCATCTCCTTGTATATCTGGAAGTATATGTTTGTCACAAGCACGGTCCATTTTCGGTGCTGCCTCTGCTTGGTC
CDS Sequence
- >BRADI_3g58720v3
ATGGATATGGAGGAAGGCAACGAGGCGCAACCACCGCCGCCGCCACAGGAAGCGCCCGAAGCAGCGGAGCCGGTTCCGATGGACCAAGACGAGGACCAGGCAGCCGCGGATCCCATGGAGGACGAAGCTGCGGGAGGAGATGCCGCGGCGGCCGTGGATCCCATGGAGGACGACGCGCCTACATCCTCCCCAACCCCGTCCGCCCCCTCCGCCACCGCGGCCGTGGACGACTCCACCGTCGCGCGGAAGCGCCGCCGCCGCAAGAAGCAGTTCCCCGGCATGATCCCCACGGCCGGCGTCCGCGTCCTCCGCGCCTCTTCCTCGTCCGCGGCGACCGCGGCGCATCTCACCGGCATCCCGCGCCGCCGTGGGCGCCCGCCGACCAACAGCCACGTCCGACAGGCTCGAGAGCTCGATTCCGAGGCCCTCATCGCCCTAGCTGCGGGATTCCCCGCTGATACTCTCTCCGAGGACGAGGTCGCCGCCGTCGTCATCCCAACCATAGGTGGCACCGAGCAGGCCAACTACCTCGTCGTACGCAACCACATTCTCGCGCTCTGGCGCTCTAATCCTCTCTCGCCCGTCTCATCCAACGCCGCGCTCGCAGCCATTCGTACCGAGCATGCCCCCCTTGTCGCCGTTGCACACTCCTTCCTGTCGGACCATGCCTACATTAATTTTGGCCTCGCCCCCTCCATTCTATCCCTCCCCCCATCACCCCCTCCATCCCTTCCTCCCCCTTCTGTTCTCATTGTCGGTGCTGGCTTTGCTGGCCTCGCCGCGGCACGCCACCTTATGTCCCTTGGATTCAAGGTTGCCATTGTCGAAGGACGACTCCGCCCAGGTGGTCGCGTGTTTACAAAGACAATGCGCTCCACTGCTGCAGACTATCCTGACATTGCTGCTGCTGCTGATCTTGGAGGCAGTGTGCTCACCGGTATCAATGGGAACCCCCTCGGTGTCATAGCACGGCAGCTTGGGTTCCCACTCCACAAGGTGCGGGACAAGTGCCCGCTGTATCTCCCGAATGGCAGTGAAGTCAACTCCGACATGGACGCTCGAGTTGAGGCTGCCTTTAACCAGCTTCTTGACAAGGTGTGCCAGCTGCGGCAGGTGGTCGCAGATAGTTTCCCACATGGCGTTGATGTGTCGCTTGGTATGGCACTTGAGGCATTCCGGGCGGCGCATGGTGTTGCCGCTGAGCCAGAGGAACGAATGCTTCTTGATTGGCATCTGGCAAACTTGGAGTATGCCAATGCTGCTCCTCTTGCCGATCTCTCAATGGCCTTCTGGGATCAGGATGATCCATATGAAATGGGTGGTGACCACTGCTTTATTCCTGGCGGTAACTCCCAGTTTGTGCGAGCACTTGCTGACGGCATCCCGATATTCTATGGGCAGAATGTGCGAAGGATACAATATGGGTGCGATGGTGTTATGGTGTACACTGAGAAGCAGACATTCCGTGGTGACATGGCGCTCTGCACTGTTCCCCTTGGTGTGCTTAAAAAGGGAGACATCGATTTTGTGCCTGAGCTGCCAGCTCAAAAGCGAGAAGCTATCCAAAGATTGGGCTTTGGTCTTCTTAATAAGGTTGTGATATTATTCCCCTTTGACTTCTGGGATGGCAGGATTGATACATTTGGGCACTTGACAGAGGACTCTGCTCAACGTGGCGAATTCTTCCTGTTCTATAGCTATTCTTCTGTCTCAGGAGGGCCACTGCTTGTCGCGCTTGTTGCTGGGGAATCTGCTATCGAGTTTGAGAAGAAATCACCGATGGAAAATGTCGAGAAGGTGTTAGAAACACTTAGGAAAATCTTTTCACCCAAGGGGATTGAGGTACCAAACCCATTGCAGGCAATCTGCACTCGGTGGGGCACTGACAGGTTTACATATGGATCATATTCATATGTTGCTATTGGGTCTTCTGGTGATGATTATGACATTTTGGCTGAGAGTGTTGCTGATAGAATTTTCTTTGCTGGAGAGGCAACAAATAGGCGATACCCTGCAACAATGCATGGAGCTCTGCTTAGTGGGTACAGAGAGGCTGCCAATATTGTAAGAGCAGCTAGGAAGAGAGCAAATAAGGTTGACTCACCTGAGAAAACAGATGTTAATTTTGAAGTCAAAGATACTGATAAAGATGACAACATCGATTTGGATGATCTCTTCCGTACTCCTGATGCTGCTTTTGGTGGCTTCTCAGTTCTCCATGACCCATCTACATCTGAACCTGATTCAACTTCGTTACTGCGTGTTGGAATTGGTGCCCGAAAGTTAGGCTCTGGTTCACTTTTCCTCTATGGCTTAATAATGCGAAAGAATGTAGCTGAGTTAGCTGCAATGGAAGGCGATGAGCAGCGTTTGAGTACCCTGTATCGAGATTTTGGGACAAAACTTCTGGGATTGGATGGCTTGGGTCATACTGGGGAAAGCCTTATATCACGGATAAAGGCTGCTTCTAAGAAGTAG
Protein Sequence
- >BRADI_3g58720v3
MDMEEGNEAQPPPPPQEAPEAAEPVPMDQDEDQAAADPMEDEAAGGDAAAAVDPMEDDAPTSSPTPSAPSATAAVDDSTVARKRRRRKKQFPGMIPTAGVRVLRASSSSAATAAHLTGIPRRRGRPPTNSHVRQARELDSEALIALAAGFPADTLSEDEVAAVVIPTIGGTEQANYLVVRNHILALWRSNPLSPVSSNAALAAIRTEHAPLVAVAHSFLSDHAYINFGLAPSILSLPPSPPPSLPPPSVLIVGAGFAGLAAARHLMSLGFKVAIVEGRLRPGGRVFTKTMRSTAADYPDIAAAADLGGSVLTGINGNPLGVIARQLGFPLHKVRDKCPLYLPNGSEVNSDMDARVEAAFNQLLDKVCQLRQVVADSFPHGVDVSLGMALEAFRAAHGVAAEPEERMLLDWHLANLEYANAAPLADLSMAFWDQDDPYEMGGDHCFIPGGNSQFVRALADGIPIFYGQNVRRIQYGCDGVMVYTEKQTFRGDMALCTVPLGVLKKGDIDFVPELPAQKREAIQRLGFGLLNKVVILFPFDFWDGRIDTFGHLTEDSAQRGEFFLFYSYSSVSGGPLLVALVAGESAIEFEKKSPMENVEKVLETLRKIFSPKGIEVPNPLQAICTRWGTDRFTYGSYSYVAIGSSGDDYDILAESVADRIFFAGEATNRRYPATMHGALLSGYREAANIVRAARKRANKVDSPEKTDVNFEVKDTDKDDNIDLDDLFRTPDAAFGGFSVLHDPSTSEPDSTSLLRVGIGARKLGSGSLFLYGLIMRKNVAELAAMEGDEQRLSTLYRDFGTKLLGLDGLGHTGESLISRIKAASKK