Information report for BRADI_3g52790v3
Gene Details
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Functional Annotation
- Encodes a transcription factor CIB1 (cryptochrome-interacting basic-helix-loop-helix). CIB1 interacts with CRY2 (cryptochrome 2) in a blue light-specific manner in yeast and Arabidopsis cells, and it acts together with additional CIB1-related proteins to promote CRY2-dependent floral initiation. CIB1 positively regulates FT expression.
Homologous
- Arabidopsis thaliana — AT4G34530
Gene Resources
- Pfam: PF00010
- UniProt: A0A0Q3IKQ5
- EMBL: CM000882
- InterPro: IPR011598 , IPR024097 , IPR036638
- PANTHER: PTHR12565 , PTHR12565:SF319
- SUPFAM: SSF47459
- PROSITE: PS50888
- Gene3D: 4.10.280.10
- OrthoDB: A0A0Q3IKQ5
- CDD: cd18919
- STRING: 15368.A0A0Q3IKQ5
Sequences
gDNA Sequence
- >BRADI_3g52790v3
TATTGTCAGGGATGATGCACATATGAATTATCTTTTACTTTGAGTACAAGTAAGGTTGGATTTTCTTTTTGCAGAAGCTGGCGAACAGTCTGTACTTTAAAGAGGGGAGGATATGCTGGAGACATAGGTCCATTGGTTTGGTGTTGCACTTTCAACTTAATGTAATTTCATGCGATATGATCTGTGTATATTGTTATGGACCCGTTCGTTGTGAGAATATGTTGTAAGTGCTTTGTTTGTAATCTGAAGTCTGAACCCTTTGTGCAGCTAGGTAGTGAAGAGTTACCCATTGCTTACGAATTGATAGATTAGCAAGACAAAAATAGAATTTCACACAGATGTACTTCTATTGTCATTGCTGACAGAATATTGCATTAGTACAGTTGCTATGAATAATGAATCTTCAGCCACAAGTGTCGCTGTAGTTAAAACTCCAGGAATGGCAATGAATCCTGCAGTCCTGCTTACATTTCCATTTTGAGGTTGTCTAGTAAACAATCACCTGCAGGGGAAAGTAGCAGCTGGATTCAGGGGAAATATTCATCTGGAGTACAAAACTGTATCTTCTGTCTTTTTTTTTTTTGCGAACTGTATCTTATGTCTTAGCGCTGCCTTACACACACAAACAGCTTTGCCTTGCAGTTCCAGAGCAACAGCTTATCAAAGTTTCAAAGTGTTCAGGCCATATGCCGTCATGTGCTTAACTAACTCTATACATGCATCTTGCAATACACTCAAATTAAGCAAGCATCATTTGAGGTGTTCGTTTCTGGCTGAGTTCTTAAATCGTCTATCAGTAATAGCAGGCAACAGCTCTGTGATGACTATTACCCTGAAATCTAAACTGTAACGTGATCTTAACTCCCCTACTATAACTCTGTATGTATGTTATTTCACATGAGGAGGTTAGTTTCGAAAGAAAAAAAAAAGTAACCTGCAAGCTTTGCTTGACAGAAACAGTAACTCACTTTGTACTTGCTGAAACTGTGCATCGAACCCACTGAACAAATTCTGAGAGCCAATGTCCCAGGCAGCAGCTCCATTCACCTGCAACAAAATACAGAGAAAAGAGTTCAGCAATGGCATCTGCTACAGCAATACACCCTGCCAAGGAAGTTTCTCCAGACACGTACGTCCAGGCATGACTCCACTGACGCCCCGGCCGACACCGGAGGCGGCGTGGCAGCCGGCAGCGGCCGGCTCTGTGCCGGCGTGTACTGGTTGTTGACGACCATCTCTAGCCCAAACCCAGCAGCGGCCGGCTGATGCATCTGCTGCATCTGGAGGCAGGACGTGTCCATCTGCCCATGAATCGGCATCGGCATGGTCGCCGCTGCAGGGCTGCAGGCTTGGCCCAGCCGCCGGCCGCCGAAGAGGTCCTCCACGATGTCGAAGTTCACCACCGGGTTGGAAGCGGCGATCTTCATGGACAAGAACTGCATATCCATCCATCCAAGCCTCCGATGAGCATTTGGAAAAGAAATGAAGCAGAGGGCAAAAATGCTGGTGCTGGCTGGTTTATACGCGGGTGCCTACCTCGACCTGCTTCTGCAGGGACTGGACGTAGTTGATGATCTCGTCGAGCATGCCGGCCTTTCCGGTGACCTTGTCGCACCCGGGCACCAGCTCCTGCAGGTACCGCATCCTCTCGCTGATCCTCTCCCTTCTCACCTGCGGATTCAGCCACATCGTCAGTTCTCTCCATTGATAGCGGTTGGCTCAGTTCAGACTTGAGAGGATCTACGTACCCGTTCGGCGAGGCTGTGGCTGTCCGTGGCCTGCCCACGGCGGGCTCTGACGTGGATGTAGTCGGTCTTCTGCCCGCCGGCCGCCCTGGGGTCCTGCTTTTGCGCTGCCACGTCTCCCTTCTTCCTTGTCCCTGCCGGCTTGGCCTTCTCCGGCTTCCCTCTCCCTGAGCTCTGATCAAGCTCGCACACCTGCTGCTTCCCTCTCGGCCTCTTGCATTCACCCTGATCACAGACAAACACACACCCATGTCAGTTCCAAGACGGGAATTGCACTAGCACTAGCACACATAGATACCAAATCTCTCACCTTTGCGTCGAGATACGCGTCGGATTTTCTCTTCGTGGAGCCGCCGCCGCTGCAGGAGAAGGAGTTGCCGCCGTTGCTGACCTCCTGCACCGGCGTCGCGCCGAAGCCGCCGGCGTAACATGCGCTGCTCATGTCCGGCCACTCCTGAAGGTAGCCGCCGAACGCGCCGCAAATCGCGCGGTACCTGCCGTCATGGAGCATCACGTCGTCGAGCATTAAGCTCTGGCAGAGGCTCTCGACGGCCGTCTCTTGCTGCAGCTGAGCACCGGGCCTCCGTGACGGCAGGCCGCCGCCGCCACAGTGCGCCATTAGCAGCGTGCGTAAGAATTGATCGAGTGATAGGGCCCTATTGGCCTAATATAAGAAGAACAGAGGATGATTAATTTGAGGCCAAGTTTTGGCTAATCGATCGGTTCTTCTTGGTGCAGACGACGGTGAGGTGTGTAACTACAAGCTAGCAGGAAGGAGTATGTGTGAATCTTTGAAGATAAGCAACGATCGATCTTGTGCCTCAAGTTTGCGTGTCCCTTTCTCTCCCTCCTCTTTTGTGCGTCCTGGATTT
CDS Sequence
- >BRADI_3g52790v3
ATGGCGCACTGTGGCGGCGGCGGCCTGCCGTCACGGAGGCCCGGTGCTCAGCTGCAGCAAGAGACGGCCGTCGAGAGCCTCTGCCAGAGCTTAATGCTCGACGACGTGATGCTCCATGACGGCAGGTACCGCGCGATTTGCGGCGCGTTCGGCGGCTACCTTCAGGAGTGGCCGGACATGAGCAGCGCATGTTACGCCGGCGGCTTCGGCGCGACGCCGGTGCAGGAGGTCAGCAACGGCGGCAACTCCTTCTCCTGCAGCGGCGGCGGCTCCACGAAGAGAAAATCCGACGCGTATCTCGACGCAAAGGGTGAATGCAAGAGGCCGAGAGGGAAGCAGCAGGTGTGCGAGCTTGATCAGAGCTCAGGGAGAGGGAAGCCGGAGAAGGCCAAGCCGGCAGGGACAAGGAAGAAGGGAGACGTGGCAGCGCAAAAGCAGGACCCCAGGGCGGCCGGCGGGCAGAAGACCGACTACATCCACGTCAGAGCCCGCCGTGGGCAGGCCACGGACAGCCACAGCCTCGCCGAACGGGTGAGAAGGGAGAGGATCAGCGAGAGGATGCGGTACCTGCAGGAGCTGGTGCCCGGGTGCGACAAGGTCACCGGAAAGGCCGGCATGCTCGACGAGATCATCAACTACGTCCAGTCCCTGCAGAAGCAGGTCGAGTTCTTGTCCATGAAGATCGCCGCTTCCAACCCGGTGGTGAACTTCGACATCGTGGAGGACCTCTTCGGCGGCCGGCGGCTGGGCCAAGCCTGCAGCCCTGCAGCGGCGACCATGCCGATGCCGATTCATGGGCAGATGGACACGTCCTGCCTCCAGATGCAGCAGATGCATCAGCCGGCCGCTGCTGGGTTTGGGCTAGAGATGGTCGTCAACAACCAGTACACGCCGGCACAGAGCCGGCCGCTGCCGGCTGCCACGCCGCCTCCGGTGTCGGCCGGGGCGTCAGTGGAGTCATGCCTGGACGTGAATGGAGCTGCTGCCTGGGACATTGGCTCTCAGAATTTGTTCAGTGGGTTCGATGCACAGTTTCAGCAAGTACAAAGTGAGTTACTGTTTCTGTCAAGCAAAGCTTGCAGGTTACTTTTTTTTTTCTTTCGAAACTAA
Protein Sequence
- >BRADI_3g52790v3
MAHCGGGGLPSRRPGAQLQQETAVESLCQSLMLDDVMLHDGRYRAICGAFGGYLQEWPDMSSACYAGGFGATPVQEVSNGGNSFSCSGGGSTKRKSDAYLDAKGECKRPRGKQQVCELDQSSGRGKPEKAKPAGTRKKGDVAAQKQDPRAAGGQKTDYIHVRARRGQATDSHSLAERVRRERISERMRYLQELVPGCDKVTGKAGMLDEIINYVQSLQKQVEFLSMKIAASNPVVNFDIVEDLFGGRRLGQACSPAAATMPMPIHGQMDTSCLQMQQMHQPAAAGFGLEMVVNNQYTPAQSRPLPAATPPPVSAGASVESCLDVNGAAAWDIGSQNLFSGFDAQFQQVQSELLFLSSKACRLLFFFFRN