Information report for BRADI_3g48880v3
Gene Details
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Functional Annotation
- Pseudo response regulator involved in the generation of circadian rhythms. TOC1 appears to shorten the period of circumnutation speed. TOC1 contributes to the plant fitness (carbon fixation, biomass) by influencing the circadian clock period. PRR3 may increase the stability of TOC1 by preventing interactions between TOC1 and the F-box protein ZTL. Expression of TOC1 is correlated with rhythmic changes in chromatin organization.
Homologous
- Arabidopsis thaliana — AT5G61380
Gene Resources
- Pfam: PF06203 PF00072
- UniProt: I1IBM3
- RefSeq: XP_003575369.1
- EMBL: CM000882
- KEGG: bdi:100831155
- OMA: NQHEYES
- InterPro: IPR001789 , IPR010402 , IPR011006 , IPR045279
- PANTHER: PTHR43874 , PTHR43874:SF1
- SUPFAM: SSF52172
- PROSITE: PS50110 , PS51017
- Gene3D: 3.40.50.2300
- OrthoDB: I1IBM3
- eggNOG: KOG1601
- STRING: 15368.I1IBM3
- HOGENOM: CLU_041215_0_0_1
Sequences
gDNA Sequence
- >BRADI_3g48880v3
CGAGGCAAAAGGTAGGAAAAAGGCGAGGAAAATATCTCATGGGCGAGCACCATCACCAGCCACGGAGCCACCGCCCTGAATAGATTAGGCGCAGACCATGGAGCGGGGCGGACTGCGACGGGCGGAGGCAGCCGCCGCCGGGCGCGGCCGCCGCTGCTAGTGCACGTACTGCTGCTGGCTGGCCGTAGCTCGCCGGGAACCGAATTGATTGGGGGTATCAGCGTCGGAGCAGATGGACGAGGAGGCTTCCGCAGATCCAACATTCGCCTCGTCCTCCTCCTTCGTCTCCTGCTTCGGTCTCTGCTGATTTGAACGCTTCGGTGGGAATCTCTCGTGCGTGGGGCTTGGGTATGGTGGGCGCCGGCGAGGGGGGTCGCGTTGGCGGCAGCGGCAGCGGCAGCGGTGCCGGGGTTGGGGGAGGACAGTCGTTCGTGGACCGGAGCAAAGTAAGGATTCTCCTCTGCGACAGCGACCCGGACAGTTCCCGGGATGTGCTCCGCCTCCTCCGCAACTGCTCGTACCAAGGTCAGTTCACCTCGTCCTTTGCTTGCTCCTTGCTGCTTGCTGTGGGCAAGTGGCCATAACTGCTAGTAGTACTCGTATTCTCTTCTACTCCACGGCATATATGTCATGATATCATGTGTCTGTTGCACGGTGGTGGTGATGTGTTGCTGCCCTCTTTTGTTGTCTCAGTGACCTGCGCCAAGTCTCCACGGCAGGTGATCAACGTGCTCAACTGCGAGGGGGCAGAGATGGACATCATCCTGGCAGAGGTCGACCTGCCTGTCTCCAAGTGCTTCAAGATGCTCAAGTACATTGCCAGGAACAAGGAACTGCGCCACATCCCCATCATCAGTAAGATGTCTCCATGTTCCCTAGTTTTCTCCAGTTCCCGTGACATGCTTGTAGTGATCATAGTCCTACTGATGCAATTATGCAGTGATGTCCAACAGAGACGAAGTTTCTGTTGTGGTCAAGTGCTTGCGGCTCGGGGCAGCCGAGTATCTGGTCAAGCCGCTGCGCATGAATGAGCTGTTGAATCTCTGGACCCATGTGTGGCGACGAAGACGGATGGTAAATGGCACCTGTTAATATATCTCCATCTGTATTAAAAGCTTGCTCTAAGCTGGTATCGATTGTTGTTAAACTGGATATTGGTGTTGGCAGCTTGGCTTGGCCGAGAAAAACTTCTTCATTGACAATCTTGAGTTGGTGCTGTCGGATCCTAGTGACGCCAATACCAATAGCACCACACTCCTTTCAGATGAGACAGATGATAGGCCAAAAGAAAACACAAATCATGAAACAAATACCTCAAATCAACATGAATATGAGGTAATCAACTAATTAATCTTTAGTAAGTTGTATGTTATCTGTATCTTAGCATCTTTCAAATTTTGTATTTGCTGCTAAAGTGCCCCCTTTTACTTCATATGCTTCATAATGATGAGGTGCTGACCTCCATGCATTAAGCTATTTGTTAAAAACCCTTGTGTTTCTTGTGACGATCAGTCTCCTGTTGCCGAATTCCCCAAAAGAGACCAAGTGGAGAATTTACCAGACATTATGGAATATGACAATAACGCACGTAAGTGTCTTTTTAGTTGGATCTTGTTATGCTGCTACTCGTTCTTAGTTCTGAACTGCTTTCTAAAGCTTCTTTTTTTTACCAGCATATACGGGGGGGATGTTTTCACGCCCAATAAAGACTAATTTGAGGGTTGGTGAGTCATCTGCGTTTCTAGCTTATGTCAAGTCAAGCACTCCAACCGACAGCCAGTTGGATAGTGAACAACCTAGAGGGTGTGATCGGTTAGATTCTATGGGTCACCAGGGTAATTTATCTAGAGCAGCTGACAGAATTGACACTAATACCAGTATAAATATTGAGGATGAAAAAGCTTTTGAGACGCCTATGCAGTATCCTGTGGTATGCTATTCTTCCTCTAACTCGCATCATGAGCGAAGCAATCAAGTCCAACATGATGTCTCGGGAGCTCCTCCTGTATATCATTTCCCATTTTATTATCCAGGGATGATAGAGCATGGCATGGCACTCCCTCCAGTACAAAATTTCCAAGGAAACATAAACAGTGCTCAACCACATACACCACCAACATTGCTCCATCAATACAATGTTTATCCCCAATCCCATGGTGTATCTATGATGCCGTCATTTCAGTATAATCATGCCGGTATGAGTTTCCATCAGTCAAGTCATTTGTCAATGCAAAATGTGTGGTCATCAGTATCAAGCACGCCGGTTCCCGATGAAACATGTAGTCGCTCTGACAGGAGGGCTGCAGCACTTGCCAAATTCAGGCAGAAAAGGAAGGAACGATGTTTTGACAAAAAAGTGAGGTATGTTAATCGGAAGAAACTTGCTGAAATAAGGCCAAGGGTGAGAGGGCAGTTTGTTAGGCAGGCAGGCAATGCAGATATAATTAGCACTGGTGATGATATCTCTGAAGATGAAGATGATCCGTCCTCGAGGGAGGTAGAGATGGTTTCTTCACCAGAGTAGTGTGATTGTGAAAGGTCTTATATGTGAAAATTGAGTGCAGATGATTATTGCACACTTCGCAACTCGGTACACATAGGCAATGCATTCTTCCGTACATGGACCTTGTGGCGTGTCTTATCATTATAACTGTCGACACTTAAGAGAAATTATCTTTTGATATGTAAGTTGTAGCCATGCTAGTCAGTGATGCACATGGCACCATGACGATCCTGATAATCATTGTGTTATTGCAGAACAACCTTGCATATCAGTTTGGTCTTATGTACTCCCTCGGTTGCATAATTCTTGTCTCAAATTTGCCTAAATATAGATGTATCTATTCCTAAAAAGTGTCTAGATACATGTAATATTTCGACAAGAAACGAATG
CDS Sequence
- >BRADI_3g48880v3
ATGGTGGGCGCCGGCGAGGGGGGTCGCGTTGGCGGCAGCGGCAGCGGCAGCGGTGCCGGGGTTGGGGGAGGACAGTCGTTCGTGGACCGGAGCAAAGTAAGGATTCTCCTCTGCGACAGCGACCCGGACAGTTCCCGGGATGTGCTCCGCCTCCTCCGCAACTGCTCGTACCAAGTGACCTGCGCCAAGTCTCCACGGCAGGTGATCAACGTGCTCAACTGCGAGGGGGCAGAGATGGACATCATCCTGGCAGAGGTCGACCTGCCTGTCTCCAAGTGCTTCAAGATGCTCAAGTACATTGCCAGGAACAAGGAACTGCGCCACATCCCCATCATCATGATGTCCAACAGAGACGAAGTTTCTGTTGTGGTCAAGTGCTTGCGGCTCGGGGCAGCCGAGTATCTGGTCAAGCCGCTGCGCATGAATGAGCTGTTGAATCTCTGGACCCATGTGTGGCGACGAAGACGGATGCTTGGCTTGGCCGAGAAAAACTTCTTCATTGACAATCTTGAGTTGGTGCTGTCGGATCCTAGTGACGCCAATACCAATAGCACCACACTCCTTTCAGATGAGACAGATGATAGGCCAAAAGAAAACACAAATCATGAAACAAATACCTCAAATCAACATGAATATGAGTCTCCTGTTGCCGAATTCCCCAAAAGAGACCAAGTGGAGAATTTACCAGACATTATGGAATATGACAATAACGCACCATATACGGGGGGGATGTTTTCACGCCCAATAAAGACTAATTTGAGGGTTGGTGAGTCATCTGCGTTTCTAGCTTATGTCAAGTCAAGCACTCCAACCGACAGCCAGTTGGATAGTGAACAACCTAGAGGGTGTGATCGGTTAGATTCTATGGGTCACCAGGGTAATTTATCTAGAGCAGCTGACAGAATTGACACTAATACCAGTATAAATATTGAGGATGAAAAAGCTTTTGAGACGCCTATGCAGTATCCTGTGGTATGCTATTCTTCCTCTAACTCGCATCATGAGCGAAGCAATCAAGTCCAACATGATGTCTCGGGAGCTCCTCCTGTATATCATTTCCCATTTTATTATCCAGGGATGATAGAGCATGGCATGGCACTCCCTCCAGTACAAAATTTCCAAGGAAACATAAACAGTGCTCAACCACATACACCACCAACATTGCTCCATCAATACAATGTTTATCCCCAATCCCATGGTGTATCTATGATGCCGTCATTTCAGTATAATCATGCCGGTATGAGTTTCCATCAGTCAAGTCATTTGTCAATGCAAAATGTGTGGTCATCAGTATCAAGCACGCCGGTTCCCGATGAAACATGTAGTCGCTCTGACAGGAGGGCTGCAGCACTTGCCAAATTCAGGCAGAAAAGGAAGGAACGATGTTTTGACAAAAAAGTGAGGTATGTTAATCGGAAGAAACTTGCTGAAATAAGGCCAAGGGTGAGAGGGCAGTTTGTTAGGCAGGCAGGCAATGCAGATATAATTAGCACTGGTGATGATATCTCTGAAGATGAAGATGATCCGTCCTCGAGGGAGGTAGAGATGGTTTCTTCACCAGAGTAG
Protein Sequence
- >BRADI_3g48880v3
MVGAGEGGRVGGSGSGSGAGVGGGQSFVDRSKVRILLCDSDPDSSRDVLRLLRNCSYQVTCAKSPRQVINVLNCEGAEMDIILAEVDLPVSKCFKMLKYIARNKELRHIPIIMMSNRDEVSVVVKCLRLGAAEYLVKPLRMNELLNLWTHVWRRRRMLGLAEKNFFIDNLELVLSDPSDANTNSTTLLSDETDDRPKENTNHETNTSNQHEYESPVAEFPKRDQVENLPDIMEYDNNAPYTGGMFSRPIKTNLRVGESSAFLAYVKSSTPTDSQLDSEQPRGCDRLDSMGHQGNLSRAADRIDTNTSINIEDEKAFETPMQYPVVCYSSSNSHHERSNQVQHDVSGAPPVYHFPFYYPGMIEHGMALPPVQNFQGNINSAQPHTPPTLLHQYNVYPQSHGVSMMPSFQYNHAGMSFHQSSHLSMQNVWSSVSSTPVPDETCSRSDRRAAALAKFRQKRKERCFDKKVRYVNRKKLAEIRPRVRGQFVRQAGNADIISTGDDISEDEDDPSSREVEMVSSPE