Information report for BRADI_3g22370v3
Gene Details
|
|
Functional Annotation
- RPD3-like histone deacetylase. HDA6 mutations specifically increase the expression of auxin-responsive transgenes, suggesting a role in transgene silencing.
Homologous
- Arabidopsis thaliana — AT5G63110
Gene Resources
- Pfam: PF00850
- UniProt: I1I3A6
- RefSeq: XP_003573796.1
- EMBL: CM000882
- KEGG: bdi:100834631
- OMA: GKIMEWY
- InterPro: IPR000286 , IPR003084 , IPR023696 , IPR023801 , IPR037138 , IPR050284
- PANTHER: PTHR10625 , PTHR10625:SF10
- SUPFAM: SSF52768
- Gene3D: 3.40.800.20
- OrthoDB: I1I3A6
- eggNOG: KOG1342
- STRING: 15368.I1I3A6
- HOGENOM: CLU_007727_7_12_1
Sequences
gDNA Sequence
- >BRADI_3g22370v3
TTCCTTTTTAAGTCTTTGAATCACGCAGTGTTTATAACCAGACAGCATAACGCCAAGATTCAGCCATAGACTTCACCATCAGGCACGGTTTAGATTCAACTCATTGAAGAAACAAAAATCCATACGCAACAAAGAGATCATATGTTCCAGCATAAACCCTTCTCCAGCGCAAGACATTTGAGGATGCAGAGGACACTGAAATGCCGACAGACAGAACCGCCAACCCGAAGAAAGTTAAGAGTACCCAAAACAATCACTGTTCTACAAAATGGTCAGGGGGCTCAGACATAAGCACATCTTCAAACACGTCCCCGCCCTTCAGTATGCATGCAGATAACCAGCAGAGCAGAGAACCAACAACTCAGGAGGGGTCATTCTACAAATCATCATTTGATTCATCCTGCATCAACAGCTTTGGACTTTAGACACCATGGTTTTCTACAAATAGCTAAAACCAGAAATGTAAATTTTGTCAAGCCAAGAGGTACTTTTTTGGACTGTTGTTATATTCTTGAAGCTATCACTTGCCAAGTTAGATTTATTTTTTAGTTAGAATAGTTGTGAGTTGAACCATCATGAACAGACAGTAGTCACCGCTAGTATAGTATCAACTAGAAATTCTGAAAATCCAGAAATATTGCACACAAGATGAATGGCATAAATTGTTGGGAACAGAAGGGCAAACCTTCACGATAGAATTGGCAATTAAGTCGTTAGCCTCAGTTTTCATGTCAGGATCTTCTGTGTCAGAATCATAAGCTCCCCCGCTCCATAATCTGCTGCGCTGACTTGGTCTCTTGTCCATATCCTCCTCCTTCTACATAAGTAAGTTATCAAATAGGCACACATGACAAAGCAAGAAAGTGAATTAAAATGAGGAATTGGCAATGGCAAGAGAGGAACCTCTGCTGGAGCTTCAGGATCAGATGGTCTATCATGAAATTGAGTGTTTGGGACATGTTCTAATGTTGAAAGATGATCCAGTATCATGTTCCTGCAGGAAGATTCCAGTACAGCAATTAGCCATACCACATAAAAAGATTATCATCTAAAGCACATGTGCAAGAAGCAGTGAGCAAATGTACTAGCAATAAAGTGGAGCAAGTTTGAGAATTCAAATCACAATGATACAAGAACGAACTAAGGAAAAATATATTAATCTATTCATTAAAGAAATAGAGAATTAATTGTGTAGCTGAATATTCCTATTTAGAAGACGGACACAGTTATAATTAAATGCTGAAGACACTAGCACAGATCATCACTAGTGGTAGCCCGTACAGAAGCTTCTGAAACAACTTCCAGTGAAAGAATGCAGAGAAATTTTAAGACACATACAACTACTTTGGGATGTTCATTCCTCTTGATTTAATATACATTAGCTCTTAAATAGGTATTATTAGCTTTATTTTGGAATTTTTCAGGATCAGATAATGCACACTGGAGCTAGCCTGATGCTGCAGCTACGATCATCGTGGTGGCAGCGACAGCAGTGACAAACCGCCCGTCACATCGCTGGCAACGTTGGTGGCAGAGTTGATGTGTATGTAGACCTTCACACCGCCGCTGGATGCTCCCTGATCCCAAGAAGCGTCAGTGGTGGTACCAAAGAGGCAGAGACCATGTTGACGGTGGGCGACGTGCTCTGACCATGAGCTGCTGGGAATGGGATGCTTGCACTGGCAACATGCTGACTGGGGAGGATGAAGTCACGATAGGCGCTCAAAGAGATTACTGTTGCCAGTATGAGGAACTGAAGAGCTAGTCCACAGGAGAATGAGAATGCCATGCTGGTGATGCTTTGAAATTTGTAACAACTAGTTCTCGAATTTATACAGGGAAGGGAACTCGATCTACGTGATTAGTCTGGACAATGTCATGGGCCAGTGTAGTACCATTCTGCCTGGCCCAGGGTGTGTATACGCCATGTCAAGTCATCATGCTTGTCTCCTAGCATCTAGTTCTAATGCTCTATTGTGCATTGTCCCATCTACAGCAAGTAAAATTCTCACGAGACACTAGACAATGTGGCAGTGCTACTAAAAACATGATGATTCTTAAAATATCTCAAGAATGTAAAATACTTCTATTTTGCAGGGGACAATACATTAATAAAACAGTTTACTTACTTTATATTCTCCAGGTCTTTTGTAGTATTTAAATTCTCTACGCTTCTTGGTTCAATATGAAGATTATAGTCAGGGCCAAAGTACTCATAGTAATCATTATAAGGCAACTTGTTATCAGGTTCAACCCCAACGGCAACTGCAGTCTGCATAGCAACAACCCAAATAACATCAGTTCTGATAACACTCAACCAACAACTTCAATCAGCTGAATGTGCAACAAGAGAGAAAGGTAAACCTCATAGCACCAGCAGCGAGCAACATTTCTGATGGTGTAACCTCCACCCCCTAAAACCATCATAGGAACATTGAATGACCTAAGGTAACGGAGGCAGTCTGCGTGGCCTTTCACAGACAGATTAAAGCAGCCTAACCTATCTCCGGCCAAAGAGTCAGCCCCACATTGGAGAACAACAACCTCTGGCTGATAAACCTCCATTACTCTCTTCATGATGCATTGGAACAGATCACGAAAGGTAGAGTCATCAATGCCATCACTAAGGGGGACATTTACAGCATAATGTTTTCCTTCACCAGCTCCAACATCAGTAATGTGTCCAGTACCAGGGAAGAAGTCCCCATACTTGTGGAAAGAAACCGTCATGACTCGGTTTGTAGTGAAGAAGGCCTCCTCCACACCATCTCCATGGTGGACATCAATGTCTACATATAGCACACGCTGGAACAAAAGAAAAAAAATGTCCGTCAGAAATTAGATACTCATCGTTTGATTCTAAATTTCTAATGTTGTAGCAACATTATTTGATAGCACAATAGCAGTGCAGTTATGCTTTATAAAGCAAAAGACAAATTCTGGCATATTCTACAGACATAAGAAAGCTTGAAAGAAAAATGCACGATAATGCTTGGCAAGTTTGGAAAACATGTGTCCTGTTTTATTGAAGATGAGATAACCTAACTGCTGATATTAAAAACTAAAGGGGTGATGATATTTCACCAGGCAACATTTTCTAGAGAGATATAAGTTGTAAGGGTGCATATCAGTCATACAGGAAGCAAACTGGATAATTACACTACAATACTGGTACAACTTACTTACAGAAGCTTGGGAACCAGTCAACCTCGATTCTAAGAAAAGTCTAAAATCATAAAACCTCATGCGTACACAAAGGCAGTTGTCTAACGATACAGATGATCAACAAATCTTGCAAGCCAAACAGGATACCTAGCAAGTTCCATGCATACAAAACTACAATATCAATTACATAAATCCAAAAACATTGAAGATATACATATGAGTTCACACAACGGAGAAAATCATGTTAACTCGTTTCTCACATCTGACGATGCTGGTGAAAACTAATGGTGCAAATTCCAAAATCACCATATCAGCTAATAAGAACTCACTATTGGAAACACCATATGGATAGCAGCAGCATCCACTTAATGAATGTATCTATTTGTTCATATTTGCTGTAAAATCACAAGTATACCTCTGTTCCTAAATATAAGATGTTCTAACTTAGTCCTAAGTCAAATTTCTTAAAGTTTGACCAAGTTTATCGAAAAATCTATCAACATCTACAACTCTAAATTAGTTTTGTTAGATCCTTCACGATGTATATCTTTATGTATACTTATTTGATATTATAGATGCTGGTACATTTTTCTATAAACTTAGTATAACTTTAAGAAGTTTGACTTAGGACAAAGTTAGAACATCTTATATCAAGGAACAGAGGTAGTAACATGGATACACAGCTTTGCATTCACATTCCAGATGGTTTTATAGCCCTACACACAGCCATTCGAGTCCCTAGTCCTCCACAATAGTGACTATATTGGCACTGGAAAACATTAACAAATTTCTTTTGCTCCTCTGGCAATCGCAGCAACGGGGATCCTTTTGAGGCTTAGCACCCTCTGCGCAACAAACAAAAACCCGATAGCTGGTGCCCCTAATAATCACATCCATTGCAATATGCATCTGATTCTAAACCCTAATAAAACCCAAAAATCGTAGTGCTCCATCACTTCCAATCACCGAACAGTTTACACAACCTAAGGAGGGTATCTAAACAAGTCAAGTGTGAAGATAAATTGGGTTAACAATAAGCATACCCCCTGAAAAAGACGAAGAAAAAGCGTACCCTGTGGAACTTCAGAAGCTCGAGGATGGCGAGGACGATGTCGTTGACGTAGCAGAATCCGGAGGCCTCGCCCTTCTTGGCGTGGTGGAGCCCGCCAGCCCAGTTCACGGTGATGTCGGCGTCCCCACGGTTGAGCTTGACGGCGGCGCCGATGCTGCCGCCAGCGGACGCCTGGCAGAAGGGGAAGAGACCGTCAAAGACGGGGCAATCCTCACCGACGTTGAAGCGCTTGACGGCGCGGGGGTCGAGGATGTTCGGGTTCCCAGTGGCGGAGGCAAGGAAGGAGACGTATTCCTCGGAGTGGAAGCGGCTGATGTCGGCTTCGGAGGCAGGGAAGGGGCGGGAGAGCTCGAGTAGGCGGTGGAGACCATAGTGGACGACCAGCGAGTGCGCCATGCGGATGCGGTGCGGCTTCATCGGGTGGCCCTGCCCGTAGTAGTAATCGCCGATCGTGGGCTCGTAGAAATAGCTGACACGACGGCGGCGGCCGTCCTCGCCACCCGCCGGAGACGGCAGCGACGCTCCTTCGCCTGACGCCGCCATTTTGGGGGATTTGTTTTCTTTTCCTCTCTGTTTGGGGGTTTAGAGTCGAGAATG
CDS Sequence
- >BRADI_3g22370v3
ATGGCGGCGTCAGGCGAAGGAGCGTCGCTGCCGTCTCCGGCGGGTGGCGAGGACGGCCGCCGCCGTCGTGTCAGCTATTTCTACGAGCCCACGATCGGCGATTACTACTACGGGCAGGGCCACCCGATGAAGCCGCACCGCATCCGCATGGCGCACTCGCTGGTCGTCCACTATGGTCTCCACCGCCTACTCGAGCTCTCCCGCCCCTTCCCTGCCTCCGAAGCCGACATCAGCCGCTTCCACTCCGAGGAATACGTCTCCTTCCTTGCCTCCGCCACTGGGAACCCGAACATCCTCGACCCCCGCGCCGTCAAGCGCTTCAACGTCGGTGAGGATTGCCCCGTCTTTGACGGTCTCTTCCCCTTCTGCCAGGCGTCCGCTGGCGGCAGCATCGGCGCCGCCGTCAAGCTCAACCGTGGGGACGCCGACATCACCGTGAACTGGGCTGGCGGGCTCCACCACGCCAAGAAGGGCGAGGCCTCCGGATTCTGCTACGTCAACGACATCGTCCTCGCCATCCTCGAGCTTCTGAAGTTCCACAGGCGTGTGCTATATGTAGACATTGATGTCCACCATGGAGATGGTGTGGAGGAGGCCTTCTTCACTACAAACCGAGTCATGACGGTTTCTTTCCACAAGTATGGGGACTTCTTCCCTGGTACTGGACACATTACTGATGTTGGAGCTGGTGAAGGAAAACATTATGCTGTAAATGTCCCCCTTAGTGATGGCATTGATGACTCTACCTTTCGTGATCTGTTCCAATGCATCATGAAGAGAGTAATGGAGGTTTATCAGCCAGAGGTTGTTGTTCTCCAATGTGGGGCTGACTCTTTGGCCGGAGATAGGTTAGGCTGCTTTAATCTGTCTGTGAAAGGCCACGCAGACTGCCTCCGTTACCTTAGGTCATTCAATGTTCCTATGATGGTTTTAGGGGGTGGAGGTTACACCATCAGAAATGTTGCTCGCTGCTGGTGCTATGAGACTGCAGTTGCCGTTGGGGTTGAACCTGATAACAAGTTGCCTTATAATGATTACTATGAGTACTTTGGCCCTGACTATAATCTTCATATTGAACCAAGAAGCGTAGAGAATTTAAATACTACAAAAGACCTGGAGAATATAAAGAACATGATACTGGATCATCTTTCAACATTAGAACATGTCCCAAACACTCAATTTCATGATAGACCATCTGATCCTGAAGCTCCAGCAGAGAAGGAGGAGGATATGGACAAGAGACCAAGTCAGCGCAGCAGATTATGGAGCGGGGGAGCTTATGATTCTGACACAGAAGATCCTGACATGAAAACTGAGGCTAACGACTTAATTGCCAATTCTATCGTGAAGGATGAATCAAATGATGATTTGTAG
Protein Sequence
- >BRADI_3g22370v3
MAASGEGASLPSPAGGEDGRRRRVSYFYEPTIGDYYYGQGHPMKPHRIRMAHSLVVHYGLHRLLELSRPFPASEADISRFHSEEYVSFLASATGNPNILDPRAVKRFNVGEDCPVFDGLFPFCQASAGGSIGAAVKLNRGDADITVNWAGGLHHAKKGEASGFCYVNDIVLAILELLKFHRRVLYVDIDVHHGDGVEEAFFTTNRVMTVSFHKYGDFFPGTGHITDVGAGEGKHYAVNVPLSDGIDDSTFRDLFQCIMKRVMEVYQPEVVVLQCGADSLAGDRLGCFNLSVKGHADCLRYLRSFNVPMMVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYNDYYEYFGPDYNLHIEPRSVENLNTTKDLENIKNMILDHLSTLEHVPNTQFHDRPSDPEAPAEKEEDMDKRPSQRSRLWSGGAYDSDTEDPDMKTEANDLIANSIVKDESNDDL