Information report for BRADI_2g61380v3
Gene Details
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Functional Annotation
- Encodes SR45, a member of the highly conserved family of serine/arginine-rich (SR) proteins, which play key roles in pre-mRNA splicing and other aspects of RNA metabolism. SR45 is a spliceosome protein, interacts with SR33 and the U1-70K protein of the U1 snRNP. Also involved in plant sugar response. sr45-1 mutation confers hypersensitivity to glucose during early seedling growth.
Homologous
- Arabidopsis thaliana — AT1G16610
Gene Resources
- Pfam: PF00076
- UniProt: I1HVE1
- RefSeq: XP_010232840.1
- EMBL: CM000881
- KEGG: bdi:100845778
- OMA: GCNARKS
- InterPro: IPR000504 , IPR012677 , IPR034201 , IPR035979
- PANTHER: PTHR15481 , PTHR15481:SF0
- SUPFAM: SSF54928
- PROSITE: PS50102
- Gene3D: 3.30.70.330
- OrthoDB: I1HVE1
- CDD: cd12365
- eggNOG: KOG0118
- STRING: 15368.I1HVE1
- HOGENOM: CLU_055032_1_0_1
Sequences
gDNA Sequence
- >BRADI_2g61380v3
TCATCTTGCCTCTCTTCTCCTACCGTCCATGTGCTGACAGCCGTCCCTCTCACTCCTACCACTCGTCGACGGCCTTCCTCTTTCCATTCACCAATGGTTTTCCTCCTTTGACTCGTCGTCCTTCTCCCATACAACTCGCCGGCGGCCTCCCTCCTTCAACTGTCTCCCTCCGTCAACTCGCTAGCAGCCATGTCCCGTCAGAGAGACGAAAATTGGGGTTAGAGTTTCAGCCTGGTCTAGCAAGTTGGTTATGGTTGGCGAACGACGAAGGTGGGATACGGAATTACGAGATCGTCCAAGTGAAACAACGACTGCAAGATATTTTTTCTAAAAATATACTGCTAACTTAGTACGCGTTAATTTTTTCTTAGAATCAAACCAATGCGTTGGAAATCTGCTCTGAAATTCCTATAGACTATAGTTCTTCCTTCCTTCTAATAACTGGATGGATTGTTCTCTGTAGCTGCAGGTGGCCCCGAGGAGCGGACCATACCTTACCCCCGCACCCCATATTTCCTCTTCCCAGAGCAAAACCCTAGCCTAGCCTAGCCCCAAACCCACACTACCCCGCTCGCTCGCTCGCCCGGTCGCCGCCGCCGCCATCGTGGGAGACGATGGCGAAGCCACGCCGCGGCCGCTCCGGCTCGCGGTCGTCCTCCGGCTCCTCCTCCCGCTCCGCGTCCTCCGGCTCCGGCTCGTCCCGCTCGCGCTCGCGCTCCCGCTCCTTGTCGTCGTCGTCCTCCGCCTCCCGGAGCCGCTCCCCTCCCGCTGCCAAGCGCAGGTGAGACCCCGCACGCTCCGGATCCACACCCTCTTACGGGCTTCCCGCTTGAGTGCTTTTTTTTAGGTGATGTTTGTTTCGATTTTGAATGCATGCTGGATGGGTGTTTTAGGGTTTGAGGATTTTAGTACGGCGATGGTTTCCGCAGTAAGGATTGTGCTATCGATGAGTCGGGGTAAAATTTCCGCTGCCCAGTAGTGGAACAGTTCGTGTGAAATAAGTTAGGAGTTGTGGCTTGTTTAGGAACTTGTGGGTCTTATATGTTTGTGCTTATCATCTAAAAAAGCGTGTAAGATTGTCGTTGGATTTACTGATTTGAGCGATACCTTGTTAGAAGAAAATAATACAAGAGAGCTTACTCGGGTGGAATTGTATAGACTTGGTGGTTGGTAGCTTCCTGCCAAGGCTAGGGTTGTTAAAGTTTTTGCTTTGTCGTTTCTCATTTCTAGTGAAATGGCACACTTTAAAGAACCAATTATCGAGGAGACAACTGCAGCTAGAATATGCATGGGCATTAGGGGTTATGATGGTTGATTCTGCTGTGTAAAATAACCAATATAGTCGTGGATTGTATGTTTCCCTTTTTTGGGGTGTTTTCAAGTCTAGTTAAGGTAGATATGAGGCTGTAGTGTACAACCATTAAATTTGAGTTTGATTTCATATTTTTGTATGTGCGAAGCCTCCACTGAATCGCTGACTTCCGCTTTGAATGTTTACCTGCACCATTTTATCAATTTGAAACATATCCTGTATTACAGTATAGTACCATAATACACTTTATACCGCGTAGTTCTAGATGAACCAAGACTTTCAGATGTCAAATTCACTCTCCTCTGTTCAATGATTTTATCCCAACACATGATTTCCCTGCTTTCACATGTCACTGCTTTCACTGATGTTACAGAAGTGAAACATTATATGAATATACTCATGTTTGAAGGCACTTGGTTACTCTTTATGCTCGCTGCATTCATTTAACATAGTTCTTTGATATTTCCTGTTTTGCTGTTGTTTTCATGTTAGTTCTCTTCTGTATGTGTACATTTATTTATGGCAACTGTTGTCTTCCCAGTTCACCTGGAGCACGGAAAGGTCGATCTCCTTCACCCCCTCCTAAAAAGGGTTCACCATCAAGGAAAGGACGCTCAGCATCGCCCCCACCTAAAAAAGCTTCACCTCCTAGGTATCAGCTTACAGAGGGTCTGCGTATTTTTTCTGCTGGTGCTGCATAGGTTTCTGTACGTTTAAGAATGTTGTTTGAACTTGTTATCATCTGTCTTGCACTATGTAGTTACTAAGAGGACTTACATTTGCGGGGTGACAATACAAAGCTTTTCCATCATACCCATTATATTTTGAGCTTTCAGTTCATATATGTTAGCGTAATACAAGTACCAGTGGCATCCTCGCAAAAAGGAAATACTAGTGGCAGTGGCATCTGAGATATTTTCTTATACATTTCTCACCTGTATAAGCTGTTGTTGAGCAATTTCTTTCCTCATTTCTGGTACTAGGAGTTAATATGTTGCATTATGTGTTCCGACAATTGTTCCTTGTTCTCCTGAAACATACACTGAGCATGTATTACGCTATCTTGTTGTGCTTGTGATATTGAGTCCATGCTATTTTTATTTTCAGGAAAGCATCTCCTGCTCCTGAGTCGGTTGTTCTACATGTTGATCATCTATCCAGGAATGTTAATGAGGCTCATTTGAAAGAAATATTTGGTGAGTTTGTCCTCGATTTCATATTTTCTTAGGCTTCATTCTTGAAGGTCAAGTCCTGTTATGTAATTATGGTTCCATTTTATTGTCAAACAAATTATCTGTACAAACTGTTGACACCAACTTATGTCATTCTGTGGATTGAGAACTAAACAACTGATCTTAACTTTTGCTTGATCTTTAACTAATTTGGTCAAGTATACATGCTAGAAGTAATACTATCATTAATCGGTTTTGTCAGAATGGTAGGCGATGAGACCTCAAATTTGGAGTCGAAGTTGGTAACCATTGTGTATGTCCTTGCACTAGTATTTACATTAAGATGATATAAAATTGCCTGTTTCATCGTTCCAATTTTGATGCTTTACACACATCGTATGGACAATGCACTGTTTTGCAATTATTCTGTATGTAAAACAGTTGTGCTAAGCAAAACACACATAACATAATGAGCTAATTATCCTATTTTGCAGGGAGTTTTGGTGAAGTGGTGAATGTGGAGCTATCAATGGACCGAATTGTAAGTGGTTATGTTTCATTAAGGATGTGTGAGGAAGCTTCTCACATCTATTTCTAATTCTCTATTTTCTTAACATAGGTTAACCTTCCTCGTGGATACGGATACATTGAGTTCAAGAAGAGGGCTGATGCTGAGAAGGCTCTTCTTTACATGGATGGTGTATGCTTTCTGCCCTATGTTTTAACTTTTGTTTTCTTATGGGCAAGTGACCAACAACTTTGTGTTTTCTCAGGGTCAAATTGATGGAAATGTTGTCAAGCTGAGATTCACACTGACACCACGCCAAAAGGCTTCTTCACCTATTAAGCCACCTCCCCCTCCTCCAAAAAGAGATGTTCCTCAGAATGATAAAGGTGCTGCTAGTGCTGAAAAGGATGCTCAGCCGCGACCTAGGGAATGTAAGCTTCTGAAGCTTTATAGCTTACAAGTTGGGCCTACTATTTCTCTGTGCTGCTTTTGCTCCAACCTTGGAGAACATTTCGTCACTGCATGTTACAGCCTTTTGATGCTCTAACCCCATTACATTCCTCCCATCAGCATCTCCACGAAGGAAGCCACCTTCACCTCCTCGAAAACGGTCTCCTCCAAATCGAAGGGTTGAATCACCCAGGCGTCCATCAGATCCATCTCCAAGGCGTCGTGCTGATTCTCCAATTCGTCGCCGACCAGATCCTTCCCCTGTTAGGCGTGGTGATAGAAGGCCGGGATCTCCAATTAGAAGACGTTCTCCTTCACCACCTAGAAGGCATAGGTCACCAATGAGGTGAGATGTCTAAATTTCATTCTTGTGTCTACTGTCTTGTTACTTGAATTGCTGACAATGGTCTCACAACTGTCCCTAGGAGGGGCCGTGGCAGTCCATCACCGCGCAGACGTTCTCCTGGGCCTCTTAGACGCTCCCCTGGGCCTCCTAGACGTCGGTAAGTCACTTTGTTCATCACCTTTGTACAACATGCCTACCCCAGCCGTGAATACAATATTTAATTTATGCTTTGGGACCTTGGTCTGATGTGTTAAACTTATCAGGTATTGCTCTTTAGTTATGGCTGTGGGTGGTATACCTATCCTTCTATCCATTTTTATACTTAAATATATGTTTTTAGTCATGATCATTTTTTTATTGTATTAGAGCTGATCATTTTTTTTATTTTGATGGGCCAAAGGCCATTACCGATACCATGTGCCAGTTATCTTGGTGTATAAGATAGCTTGCTAATTCTTCACTTGGGTGTCCTGTACTTCTGTTGTATCAGCAAGTTCTACTAGATACCTTTTCCTCTTTTTTTGTCTACCATATCAATTGTGCTAATCCACTTGCTCTTCTCTGCAGATCACCACCCCCAAGGAGGTTGAGGAGCCCTCCAAGAAGGCCACCACCACCACCTCCGCGTCGTCATAGTCGTTCCCCTCCTCCTCGCCGCCCTCTTCACTCTCGCTCAAGATCAATTTCTCCTCGTAGGTAATGAAATCGCTGCCATCTCTCTGCCTTATCCATCTTCCAATGGAGCTCATCTCTTTTGTTCAATTTAAATGATATTCCTACATTCCTAATTCTCTCTGTGGTAGCAGGGGCCGAGGACCTCCATTGAGGCGTGGAAGGTCAGATTCATCCTATTCCGGGTCACCTAGTCCTCCAAGAAAGGTGAGTTCCACATCTGCTGTGTTTTTCGTAGCCACGCCCACGATCAAAATAGAACACTTTGTTTTACTTCTGTATGTTGAGTTAGCTTGTGCAATACTTGGTTCAATTCTAAAAACTTTCTTTTACAGGGACCAAGAAGGGTATCGCGGAGTCGCAGCCCTAGAAGGTAGGTGACTTTCTCTGGTGTTTTTACATTATCGGGCGTTTTGCGCTATGTCCAGACATGCAAATATTATATAGCAATGTACGTATGTTGAAACCAAATTAGTTTATTTTCAGAAAACTAAACATGCCATGTCTTTCAGGCCTCCTAGAGGAAGGAGCATCTCCAGCAACAGCGGGAGCAGCAGCTCTTCCCCTAGACGCAGGTAGAACCCCTGACATGTGTGTTCCTGGCAGGTAAAACCTTTTCTCTCTTGACTATCACTATCGTTTGCCTCTGCCTGTAACTTGTGTGAGCTCAACTGGTTGATTTGAGGGGACACACCAAGAGCTTCCAATAGATCTGCTTCAACATTCCTGGTGGAATTTCTGCAATTTGTGCTCAAAGGATGATACTCGTGCGATAACTTATGTATTGATACCTGTACCGAAGTACACCTCAAATTGAGAATTTGTTTCTTCTATGCTATGGATCTGGAAATTCTGTTGTTACATTTGAAACGAGCTGCTTGCCTCCATTTCTCTTACTAGTTGATCTGCTCATGTTAGAATTTGTTTTCTGAACGCCATGAATATGAATATTCTGTTGTTAAATTTGAGATGAGATACCTGCCTTCTGCTC
CDS Sequence
- >BRADI_2g61380v3
ATGGCGAAGCCACGCCGCGGCCGCTCCGGCTCGCGGTCGTCCTCCGGCTCCTCCTCCCGCTCCGCGTCCTCCGGCTCCGGCTCGTCCCGCTCGCGCTCGCGCTCCCGCTCCTTGTCGTCGTCGTCCTCCGCCTCCCGGAGCCGCTCCCCTCCCGCTGCCAAGCGCAGTTCACCTGGAGCACGGAAAGGTCGATCTCCTTCACCCCCTCCTAAAAAGGGTTCACCATCAAGGAAAGGACGCTCAGCATCGCCCCCACCTAAAAAAGCTTCACCTCCTAGGAAAGCATCTCCTGCTCCTGAGTCGGTTGTTCTACATGTTGATCATCTATCCAGGAATGTTAATGAGGCTCATTTGAAAGAAATATTTGGGAGTTTTGGTGAAGTGGTGAATGTGGAGCTATCAATGGACCGAATTGTTAACCTTCCTCGTGGATACGGATACATTGAGTTCAAGAAGAGGGCTGATGCTGAGAAGGCTCTTCTTTACATGGATGGTGGTCAAATTGATGGAAATGTTGTCAAGCTGAGATTCACACTGACACCACGCCAAAAGGCTTCTTCACCTATTAAGCCACCTCCCCCTCCTCCAAAAAGAGATGTTCCTCAGAATGATAAAGGTGCTGCTAGTGCTGAAAAGGATGCTCAGCCGCGACCTAGGGAATCATCTCCACGAAGGAAGCCACCTTCACCTCCTCGAAAACGGTCTCCTCCAAATCGAAGGGTTGAATCACCCAGGCGTCCATCAGATCCATCTCCAAGGCGTCGTGCTGATTCTCCAATTCGTCGCCGACCAGATCCTTCCCCTGTTAGGCGTGGTGATAGAAGGCCGGGATCTCCAATTAGAAGACGTTCTCCTTCACCACCTAGAAGGCATAGGTCACCAATGAGGAGGGGCCGTGGCAGTCCATCACCGCGCAGACGTTCTCCTGGGCCTCTTAGACGCTCCCCTGGGCCTCCTAGACGTCGATCACCACCCCCAAGGAGGTTGAGGAGCCCTCCAAGAAGGCCACCACCACCACCTCCGCGTCGTCATAGTCGTTCCCCTCCTCCTCGCCGCCCTCTTCACTCTCGCTCAAGATCAATTTCTCCTCGTAGGGGCCGAGGACCTCCATTGAGGCGTGGAAGGTCAGATTCATCCTATTCCGGGTCACCTAGTCCTCCAAGAAAGGGACCAAGAAGGGTATCGCGGAGTCGCAGCCCTAGAAGGCCTCCTAGAGGAAGGAGCATCTCCAGCAACAGCGGGAGCAGCAGCTCTTCCCCTAGACGCAGGTAG
Protein Sequence
- >BRADI_2g61380v3
MAKPRRGRSGSRSSSGSSSRSASSGSGSSRSRSRSRSLSSSSSASRSRSPPAAKRSSPGARKGRSPSPPPKKGSPSRKGRSASPPPKKASPPRKASPAPESVVLHVDHLSRNVNEAHLKEIFGSFGEVVNVELSMDRIVNLPRGYGYIEFKKRADAEKALLYMDGGQIDGNVVKLRFTLTPRQKASSPIKPPPPPPKRDVPQNDKGAASAEKDAQPRPRESSPRRKPPSPPRKRSPPNRRVESPRRPSDPSPRRRADSPIRRRPDPSPVRRGDRRPGSPIRRRSPSPPRRHRSPMRRGRGSPSPRRRSPGPLRRSPGPPRRRSPPPRRLRSPPRRPPPPPPRRHSRSPPPRRPLHSRSRSISPRRGRGPPLRRGRSDSSYSGSPSPPRKGPRRVSRSRSPRRPPRGRSISSNSGSSSSSPRRR