Information report for BRADI_2g35720v3
Gene Details
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Functional Annotation
- Encodes an auxin receptor that mediates auxin-regulated transcription. It contains leucine-rich repeats and an F-box and interacts with ASK1, ASK2 and AtCUL1 to form SCF-TIR1, an SCF ubiquitin ligase complex. Related to yeast Grr1p and human SKP2 proteins, involved in ubiquitin-mediated processes. Required for normal response to auxin and repressed in response to flagellin. As part of the SCF complex and in the presence of auxin, TIR1 interacts with Aux/IAA transcriptional repressor proteins and mediates their degradation. Mutations in TIR1 block auxin stimulation of flavonoid synthesis.
Homologous
- Arabidopsis thaliana — AT3G62980
Gene Resources
- Pfam: PF18511 PF18791
- UniProt: I1HLS4
- RefSeq: XP_003568922.1
- EMBL: CM000881
- KEGG: bdi:100822026
- OMA: TDDCLEM
- InterPro: IPR006553 , IPR032675 , IPR036047 , IPR041101 , IPR041567
- PANTHER: PTHR16134 , PTHR16134:SF66
- SUPFAM: SSF52047 , SSF81383
- Gene3D: 1.20.1280.50 , 3.80.10.10
- OrthoDB: I1HLS4
- eggNOG: KOG1947
- STRING: 15368.I1HLS4
- HOGENOM: CLU_022456_1_0_1
Sequences
gDNA Sequence
- >BRADI_2g35720v3
CCGAGGGGGAGGTAGGGAGGAGAGAAGGAGTAGAGAGAAGACCAAAGGGCAGAGAGCAGAGCCCAGAAGAGAAGAGAAGAGAAGAGAAGAGAGACTCTCTTGCATCTCTCTCCAGATGCTCTCCCTACCGCCGCCTCCCCACGCGCTCCACCGGCCCGTCCCAGCAGCCGCCGCCGGGTAGACACACGCACGCAGCCCGGCCCCCTAACGGCCAGCGCCGCCCCGATGGGCCGCGGCGTCGGCTCGCGCTCCGGCGGCGGCGCCGCGCAGCCTCCGTGGCACTCGCTCCCGGACGAGGTCTGGGAGCACGCCTTCTCCTTCCTCCCCGCCGCCGCCGACCGCGGCGCCGCGGCGGGCGCCTGCCGCGGCTGGCTCCGCGCCGAGCGCCGCTCCAGGCGCCGCCTCGCCGTCGCCAACTGCTACGCCACGTCCCCGCGCGACGCCGTCGAGCGGTTCCCCTCCGTGCGCGCCGCCGAGGTCAAGGGCAAGCCGCACTTCGCCGACTTCGGGCTCGTCCCGCCCGCCTGGGGCGCCGAGGCCGCGCCCTGGGTCGCCGCCGCCGCCGACGGCTGGCCGCTGCTCGAGGAGCTCAGCTTCAAGCGCATGGTCGTCACCGACGAGTGCCTCGAGATGATCGCGGCCTCCTTCAGGAACTTCCAGGTCCTGCGCCTCGTCTCCTGCGAGGGATTCAGCACCGCCGGGCTCGCCGCCATTACCGAGGGTTGCAGGTGAGGCGCCGCGTCTCGGGACTCAAGATTTGAGCTAAACATTGGAGCTTTGGGTGCTTCTTTGCTTCCTTTGTGTGGAGATTTGAGCTTTCTTTCGGCTTCTTTCTAGCTGAAGATGGGAGATTTCTTGGTGCCTTTTGTGATCTGAACTCGGTTCTTGTTCCACTGAACTGATTTCACCTTTCAGAGTTTTTCTCAAAATGGGTTGCTTTTAACGATTTTGAGCTACACAACTGGCTTTGTTTCTTCTTCTGATTGGGTAGTACTTGGGGTAGATGTAAGTTTCAGTTCAGATTTGATCTATTTCTGAGCGTTAAACTGAACTTCTAGCTCTGCTGGTGTGAGCTGGACTTGTTTTTTCGATTATTTTCCCTGATGCTGAAGTGTATTTTTCTTTTAGCTGCTCACTATTTAATCTAGCGTCGAAAGAGTGATTTCTTGGAAAATCTTGGTTGTCTTCTCCAAAACATGGAGCTATGATTTGCATTTAGCTTTTATCTTGTCCTGCAGAAGCTTTGCCTCAGATGTGTGTACTGCGATCGATTGGATTGTGAGAGCTTGATGTCTTGCGAACGGATCTGTGGGATTGACATATAAAATATTTCATTAGCAATGATGGATTCATCCCTTTTTATCTTTTTCCCAAAAGGATGGGATTATTTCAGGTTTAGTTAGAACCAATTGGATGCACCTTTACTTTAAAAATTGTATTGTTTGCACATGATGAGGCACCGGATCTCACTTGAACTGTTCTCCTTTTCATTTTCACTCCACATTCAAGGGTGTATGTGGACTTACCCTCCTGATTTGAGCTTTTAGATTCTGAAGTAGCATGTTTGCAATATGCAGATTCCCGTTCAGCGGTTTTCCCCTTTTGTGGGATGCTGAAGATTCTTATGACTACAATCTTTCATTAAGTGGGGGAATGTGATGTTTTAACCTGATGTTCATGATATTCGCACGTAATGGACCATTGAAACAAGCAAATTTGCTCTGGTAGGGTGATTGGTCGAGCTGTCGAGCTTGCTGGAATCAATGAAAAAAAAAGAATTAATAATTTACTAGATCCCTACCTTTAAGATTTGATACTTAGGAATTTGATAGGGGTCCATTTGTTTAGTACTTTAATGTGCCTAACCAGCATCATATGGATCATTTTGACTTTTGAGTGATAGGAAATAGTTGAGCTCTGAGGAAAGGTTAGTGAGTGAGGTTTGACTGATGATATGCCGATGTTATGTTCCAACATAGAAGAGAGTTCGAGAAAAACCAAATGTGCTCCGGTTATTGTATCATGCCATATTTGCACATGTGAGGATAGCTCATTAGATAGAGCCTGGGCATTGAATTGCATAGACTTGGGGGAGAGTTGGATTGTAATGCCTGACCCTCTCTTAGCTCTAGCTTCTGATGTACGTTGCAGCTATTTTTACTAATAGCGTGTTGGTCGGTCTTGAACCTGAAACCACTTACCTCCGGTACAATTTGTCGGGTCTTTGGACTTAGGGCCTCTTGGAATTCAACATCACTGTTACTGTTTATGGTTGATAGATTTATTATAGGTGCACCCTTTAATATAAGAAAAGCAAATGGTAAATTCACTTTTGAGTCCTTGTGTTGATCTGTTGACCTACTTTGCAGTTATGCTCAAGCTTTTTTCTCATGTTCTGTTTGGTTATTGTCCTTCAAAGATTTTGACAGCATAGGCAGGGGTGCACAGTTTTTTCATTTGGGTTGAGATGTCATAGTAATTAAATATTGTTTTAGTTATGTACTTCAAGCATTGTTTAGTCCTTAGCTCAAAATATTTTTCTGTATAAATTCAACATTTACTTTGTTTTCAAATTAAAGGCCTAAATATCGAGGTGTGGATGGAGTTGATAGTTTACATCATTGGGTCCGAGTTGCTGAGTTTATATTATTTTTGTTTACTCGGAACTTTTGTGGTTTGGAGGTGGTTGGGTCTGATGAGTGGGTCCCTGCTCTAGATCCAAGATATACAAAAGTCTGACTAGCCTAAACTGATCATATACTGAGGCTGCAAATAATGGAGATCTTAGCAAGTCCCTTTTTGGTGAAGGAAATTCTCGTAGTATCATTGCATAAAAAAATGCAGAGCAAACCTTTACGTCAAGGATAATCGTTTTGGTATGCCGGTTTACACTGGTCGTTCCTCCGTAGCACCTCTATTAGTAAATGATATAACTTGTTCCAGATGGTTCCATCTCAACGAGACACTGGATAGCAACTAAAATACTGGGAATGTAATTTTAATTTTTTATAAGCATAAATTTCTTGACACATAGTGGTGTAGCTGGAAAAAAGAATACATGGATCTGTAAAACAATTAATGAATGAATATGTTAGGTAATTATATGTTTTATTTGATGCATCGATGTCATGGGCTTACAACCCTATAGGAGGCGCACCAAGGATTAGGCAGCAGTTTATTACAAAGGTTTATCTCTTTATGATTACCTTCTTAGAGAGAATATTAATTACCTTATGTTAAAGATTGCTTTCTTATGAGTTAAGCTAATATCAGAGGAGAGCATGTATCCTTTATCAATGAATCAGAGGATAAACAATCTATCTCACAATCCTCTTTTCCCCTGCTTTTGAGGCATGACTGCCGGCAAGACGCTGTCGTGCCTCCTCTGTCTAGGGCTTAAATAGCCCCTAAATACCCCATCATGTGGCAGTCCATTTTACTTTATCATGATTTTGTATGCCATAGCCAAGTTGTATGAGCTATTTTCTTCTGTCATGAATCTCCTTGCTCCTTCCACCAAATACTTGTATGGGCTCTGTTTGTTTCTCAAGTGATGGTACCATTGGTAATGTGCTAATGGCTACCTTTGTTCCAGTTTTAATAATTCTTCTGAGATATGATTCATCGGCTATCTTCAAGTGCTAACTTCTATCCACTCTTGATGTTGCAGAAATTTGAGAGAACTTGACCTTCAAGAGAATTATATTGAGGATTGTTCCAGTCATTGGCTCAGTAGCTTTCCAGAATCCTTCACTTCTCTGGAAACTCTTAATTTTTCATGCTTAGATGGGGAGGTCAATTTTGCAGTACTTGAGCGGCTAGTGACCAGATGTCACAATCTCAAGACTCTAAAGCTCAATAATGCAATCCCTCTTGATAAGGTTGCTAGTCTCCTTCGTAAGGCTCCGCACATAGTAGAACTTGGAACTGGCAAATTCTCTGCTGATTATCATCCAGATCTCTTTGCAAAGCTTGAAGCAGCATTTGCAGGTTGTAAAAGCCTGAGAAGGCTATCTGGGGCTTGGGATGCTGTTCCAGATTACCTGTCAGCATTTTATGGTGTATGTGAAGGCCTCACATCACTTAATCTGAGTTATGCTACTGTTCGAGGCCCTGAGCTCATTAAATTTATTAGCAGATGCAAGAATCTGCAGCAATTATGGGTATGCAACTCTTCCTCGTGCTTTTAGTAGATATCAACTTTAATATCCACAGAGTTTTGCAAATACACTCAAAACCTTTTGCGAGAATATTGCTATGAATGCTTGATTCCATGAGAACCTATATGCATGAATCATGAATGTCACTTTGATGTACCTCATACCTTTTGTGATCTCCTAGATGCTACTTGAAAATGTTATTTTTAATAATATGTTGCGGGAGTTCTATTGGTATAAGGTTGTAAAAGCATAATCAATATTACACATATCATTTTATTCAAACATAGATGTCATGGTGACAAGAGTTTGTGGCTAGCAGTAATTGCTGTCTTATCATGCATATGTATAGTCTGCACTCTGCACAGGAATGTTGTGTAATATCATGTTGGCTGCATTGTATGACTTAACTGAAACTACCATCATCTCTTGGTGAGCTAGGATTCCTGTACTGGCATAAATCATCTGCCCCTCTGTTGATTGCCAAAATGTTTTCAGATATTTACTTGCTCCAGCAGTGTAGTTTTCAAAACTGAATTATGATCTTAATTCCCTGATGGTTAAATGTCTTTTCATGCTCTTTGCACATTTTCATTTAAAGTTTAATCTGTGATTTTCAGGTCATGGATCTCATTGAGGACCATGGTCTAGCTGTCGTGGCATCAACTTGCAGTAAACTACAAGAGTTGCGGGTCTTCCCTTCTGACCCTTTTGGTGCTGGGCAAGTTTTGTTGACTGAAAGAGGTCTTGTTGATGTTTCTGCCAGTTGTCCCATGTTGGAGTCGGTCCTCTACTTCTGCAGGCGGATGACGAATGAGGCTCTTATTACAATTGCAAAGAACCGTCCCAACTTCACCTGCTTCCGCCTATGCATCCTTGAGCCCCGTACTCCAGATTACATCACACAACAGTCTCTTGATGCAGGTTTCAGTGCCATTGTGGAATCATGCAAGGGCCTTAGGCGCCTCTCTGTCTCCGGCCTTCTCACAGATCTTGTATTTAAATCAATCGGTGAACATGCTGATCGTCTTGAGATGCTTTCAATAGCCTTCGCTGGGAACAGCGATCTAGGCCTGCACTATATCCTCTCAGGCTGCAAGAGCCTAAAGAAGCTGGAGATCAGGGACTGCCCATTTGGGAATAAGCCGTTGCTGGCAAATGCTGCCAAGCTGGAGACAATGCGATCCCTTTGGATGTCGTCATGCTCGTTGACCCTGGGCGCATGCCGACAGCTTGCACAAAAGATGCCTCGCCTTACTGTGGAGATCATGAACGATCCTGGACGAGCATGTCCCTTGGATGCACTTCCGGATGAAAGCCCTGTTGAGAAATTGTATGTGTACCGGACAATTGCCGGTCCAAGGTCTGACACACCAGACTACGTCCAGATTGTTTAAGGGCGTCATGCTATATGGGGGTACTCTGGGTGTTCATTTTCAACCTCAATTGGTACCTTCTGCAATCTGCATCTTCCTAGCATAACATAGAGTTTTTTTAAGGCAAGTAGAAAGGCTGGTGGTTTGATGAACCTATCATAAGATCTCTACTTGACAAATGTAGGATGAGACTCGAGGCCTTTTTTCAGGTGTTAATAACTGTAGGGGGCTCGGTGGATTACAGAAACTACTAGATAGCGTCATGAGAAAACCTTGGTTTGTTTTCTTTAGCGTGTTTAGTTCCTTTTATGTATAAAAATATGGCACCATTTTAATCTTGTAATGTACTGTATTACTGGATAAACTGTACCTGAGCTGAGTTTGTCACCTCTACCTTTTGGCCTTCCTTTTTCTAATTATGGGTTGTTCTGGATGCTAAATAATCATGGCATGTATTTCTTGTGGTATATCTGGTGTTCTATTTGGTTCAGAACTGTA
CDS Sequence
- >BRADI_2g35720v3
ATGGGCCGCGGCGTCGGCTCGCGCTCCGGCGGCGGCGCCGCGCAGCCTCCGTGGCACTCGCTCCCGGACGAGGTCTGGGAGCACGCCTTCTCCTTCCTCCCCGCCGCCGCCGACCGCGGCGCCGCGGCGGGCGCCTGCCGCGGCTGGCTCCGCGCCGAGCGCCGCTCCAGGCGCCGCCTCGCCGTCGCCAACTGCTACGCCACGTCCCCGCGCGACGCCGTCGAGCGGTTCCCCTCCGTGCGCGCCGCCGAGGTCAAGGGCAAGCCGCACTTCGCCGACTTCGGGCTCGTCCCGCCCGCCTGGGGCGCCGAGGCCGCGCCCTGGGTCGCCGCCGCCGCCGACGGCTGGCCGCTGCTCGAGGAGCTCAGCTTCAAGCGCATGGTCGTCACCGACGAGTGCCTCGAGATGATCGCGGCCTCCTTCAGGAACTTCCAGGTCCTGCGCCTCGTCTCCTGCGAGGGATTCAGCACCGCCGGGCTCGCCGCCATTACCGAGGGTTGCAGAAATTTGAGAGAACTTGACCTTCAAGAGAATTATATTGAGGATTGTTCCAGTCATTGGCTCAGTAGCTTTCCAGAATCCTTCACTTCTCTGGAAACTCTTAATTTTTCATGCTTAGATGGGGAGGTCAATTTTGCAGTACTTGAGCGGCTAGTGACCAGATGTCACAATCTCAAGACTCTAAAGCTCAATAATGCAATCCCTCTTGATAAGGTTGCTAGTCTCCTTCGTAAGGCTCCGCACATAGTAGAACTTGGAACTGGCAAATTCTCTGCTGATTATCATCCAGATCTCTTTGCAAAGCTTGAAGCAGCATTTGCAGGTTGTAAAAGCCTGAGAAGGCTATCTGGGGCTTGGGATGCTGTTCCAGATTACCTGTCAGCATTTTATGGTGTATGTGAAGGCCTCACATCACTTAATCTGAGTTATGCTACTGTTCGAGGCCCTGAGCTCATTAAATTTATTAGCAGATGCAAGAATCTGCAGCAATTATGGGTCATGGATCTCATTGAGGACCATGGTCTAGCTGTCGTGGCATCAACTTGCAGTAAACTACAAGAGTTGCGGGTCTTCCCTTCTGACCCTTTTGGTGCTGGGCAAGTTTTGTTGACTGAAAGAGGTCTTGTTGATGTTTCTGCCAGTTGTCCCATGTTGGAGTCGGTCCTCTACTTCTGCAGGCGGATGACGAATGAGGCTCTTATTACAATTGCAAAGAACCGTCCCAACTTCACCTGCTTCCGCCTATGCATCCTTGAGCCCCGTACTCCAGATTACATCACACAACAGTCTCTTGATGCAGGTTTCAGTGCCATTGTGGAATCATGCAAGGGCCTTAGGCGCCTCTCTGTCTCCGGCCTTCTCACAGATCTTGTATTTAAATCAATCGGTGAACATGCTGATCGTCTTGAGATGCTTTCAATAGCCTTCGCTGGGAACAGCGATCTAGGCCTGCACTATATCCTCTCAGGCTGCAAGAGCCTAAAGAAGCTGGAGATCAGGGACTGCCCATTTGGGAATAAGCCGTTGCTGGCAAATGCTGCCAAGCTGGAGACAATGCGATCCCTTTGGATGTCGTCATGCTCGTTGACCCTGGGCGCATGCCGACAGCTTGCACAAAAGATGCCTCGCCTTACTGTGGAGATCATGAACGATCCTGGACGAGCATGTCCCTTGGATGCACTTCCGGATGAAAGCCCTGTTGAGAAATTGTATGTGTACCGGACAATTGCCGGTCCAAGGTCTGACACACCAGACTACGTCCAGATTGTTTAA
Protein Sequence
- >BRADI_2g35720v3
MGRGVGSRSGGGAAQPPWHSLPDEVWEHAFSFLPAAADRGAAAGACRGWLRAERRSRRRLAVANCYATSPRDAVERFPSVRAAEVKGKPHFADFGLVPPAWGAEAAPWVAAAADGWPLLEELSFKRMVVTDECLEMIAASFRNFQVLRLVSCEGFSTAGLAAITEGCRNLRELDLQENYIEDCSSHWLSSFPESFTSLETLNFSCLDGEVNFAVLERLVTRCHNLKTLKLNNAIPLDKVASLLRKAPHIVELGTGKFSADYHPDLFAKLEAAFAGCKSLRRLSGAWDAVPDYLSAFYGVCEGLTSLNLSYATVRGPELIKFISRCKNLQQLWVMDLIEDHGLAVVASTCSKLQELRVFPSDPFGAGQVLLTERGLVDVSASCPMLESVLYFCRRMTNEALITIAKNRPNFTCFRLCILEPRTPDYITQQSLDAGFSAIVESCKGLRRLSVSGLLTDLVFKSIGEHADRLEMLSIAFAGNSDLGLHYILSGCKSLKKLEIRDCPFGNKPLLANAAKLETMRSLWMSSCSLTLGACRQLAQKMPRLTVEIMNDPGRACPLDALPDESPVEKLYVYRTIAGPRSDTPDYVQIV