Information report for BRADI_2g12720v3
Gene Details
|
|
Functional Annotation
- EARLY IN SHORT DAYS 4 Arabidopsis mutant shows extreme early flowering and alterations in shoot development. It encodes a SUMO protease, located predominantly at the periphery of the nucleus. Accelerates the transition from vegetative growth to flowering. Probably acts in the same pathway as NUA in affecting flowering time, vegetative and inflorescence development.
Homologous
- Arabidopsis thaliana — AT4G15880
Gene Resources
- Pfam: PF02902
- UniProt: I1HF82
- RefSeq: XP_003567671.1
- EMBL: CM000881
- KEGG: bdi:100831337
- OMA: MGFFRWP
- InterPro: IPR003653 , IPR038765
- PANTHER: PTHR12606 , PTHR12606:SF1
- SUPFAM: SSF54001
- PROSITE: PS50600
- Gene3D: 3.40.395.10
- OrthoDB: I1HF82
- SMR: I1HF82
- eggNOG: KOG0778
- STRING: 15368.I1HF82
- HOGENOM: CLU_024324_6_2_1
Sequences
gDNA Sequence
- >BRADI_2g12720v3
CATTTAGTACAAAATTTGTACTCCTTGCCTTAGTACAAAATGGGCAACATTTTTTATAGATAGGAGGGAGTACCATTTAAGACAAAAAGAGGATGGGTGTCATACAAAACTGTTGCTGCACCAAAGCAAGTATGTCATATAAAACATAACGAATCGCTCACGGCTGGATGATTACAATGGAACTTACATCGCCCTAAAATGAGATAGCACACTACTCAAAGTCTACAGCCAGCCGTTAGATACAAGTTCCGACCATGCTTTGATGCTTTCCCTCGAATGTCACTGGCTCTACCGTTTAAAACCAGGCACAAAACCATGCCCTTCCATCCACCGATGGCTTGCTCCAAGAAGAAACACTGCCAGGGCAGCCAGTTGTACTTATGCAAGCAAATCTTTAGGCCCTGTAGTTTGATCTTTGCAGGCAGGATCATTTGAGTACTTGAGAAGCTCCAATTATCCTTCCATTCAGTTTTGAACTTTGGCCTTTAGTTACCTATGATGCCCTTCATAATTATCCAGCCTTTAAATCCAAGATTTCTTTTGCAGTCCTCCTCCGGAAGTAAGACATGTGTTTCTATACAAGACAACCAATTACGGAAACCAATTTAGTTCATTTAGCATGTAACAAAGCATCAAATCTTGGTTAAATTCTACAAAATACAGAATATGTATTAACAGCAAAACAAGAGCAGTACCTGTCCAAAAACAAGCTCCATATCTCTGCTGTAGAAGTCTATATATTTAAGCATGAACATGCCACAATCCCACCTAAGATGACAGACAACTCAGCAAGTAGTACACTGGGTTTATTTTAGAATAAAGGTAGAGTAATGCCATGGGAGATTATAAGTTTCGTAACACTGGAAGATGGCATGAAACCCTCTATTTGAAGAGAGTCCCCTATTCATACCTATCTTACGGTACAAGATCAAGCAGAAAAATAATTGTATCCGTAATAGGACTACTACAAAGATAAGAAAAATACCCATTCTCCTGCAAAGGAAGGTTTTGGACACCTTCCTGCTTCCATGCATGAACGTCTATCTGTTTGCCACTCTTGTCTTTTACCTCATCCACAAGATATTTGGCCTGGTACAGGTGGAAAAGGCTCAAGTTAGAATCATCAACACATGATAGACCATGATGTCCTGAACAGAAAACACGAGCAGCGAGATGTGCTCTTGGTAGGGAGATATCACTTACTAAGATTCTCAGGGCCTTCATGTCCATGTAGCCAAGTGAATCCAGATATTGGAACTTTTTCTCCTTTATGTTGATGACTGCTAAACACCAATGCACATCCTTGTGTATGGGGACAAAAATCTGGACACGGTGACTAGTTTCGATTAAAAGAATGGCCAAATCACAGGAGGATGAAAGGTTGACAAAGGACCGTAATACCATTTACCTTATCACAATCAATCAGGTTGTACCCTAACTTCCTTTTCGTTGTCCATCTCCTAACGGACTTATAATCATACCCACCATTAATCAGCTGACAGCAGAAGCATGAGAAAAATATGAGTTATGATTAACGGAAAACTGAGTTAAGTACAATATATCAACACATTAAATCCACCAGAAATGAAATGATATCAGTTGATAATATGAATATGGAATCATTAGAAGAAATTAGTACTACAGTGATAACCAAGCCATACTACTTCTGCATGCCATCTCATTATACTAAATGATGGAATAGAGTAATGAAATAGCAAGCGCAAGTGCAGCGGTTTCTGTAATTGCAATAGTAGAAATTTAGAGCAAAAAGAAACTAGGACACAGGGCCGCATTAAACAATCAAACAGAAACTAGCTGAATGACACTCTACAGGGATTCAAGTAAAAATCATTGCAAGTGAAAGGCAAAGCAATGCCTAACTGATGTGATGGATCATTGGATATAGTAGCATACCTTCTTGTAGAAAAAGGTGTTGAAGAAGTGGCACTTTAAGAACTTGTTGGGTTCTCTCAGTTCCCTTTCTTTCAGGAGTTCAAGATACAAATTTATCACCTGAAAATAATCAGAGATGCAATTACACTTGTGATTATTTATATGCTTACTCTGGAGTCCAATGTACGAGAAGGGGGGACATATAGGCTATAGCAGGAGAAATTGAATACCTCGTCATTCAGCCACTCTTTATCATTCAGGCACTGCAAGATCTCTCTTGTTATAACAATATTTGAAGCTTCATGGACCGACAATGTCTCACTTCTGGAGAAGAAAGGAGGCCATTTTCAAACAGTGCTAATTATGCTAGACATTTTACACAAGAAATATGCCCACAGCCTACTGTCTCTAAACTCTTAACAAGAACAGAGAAGAGGCAAAACCTTTTCCTGCCACCAAGAGCATGACGAACATTGTCCTCATCCTCATCCGTTAGAGGAACAAAAGGTTCAGGCACCTCCTGAAACATATGTTAACACACATATTAGCATCAAACATCGGAATAACATTCTTTTAGAAATAAGATTATCCGCTAGTTTGATTATAACATTTTAGCCTCGTTTTCTGCAATAATAGTCAATAAGTGCATTGCACTTAAGTATATTTCCCTTTTAAAAGTGCACTTTAAAGTATTCATAAACGAACATATGAAGTCAAAAAAAATTCAGTTTTCACTTTCCTGTGTTAATGAAAATGCAAACCCCCCAGATTCTTTCCCAAAATACTTTCAGAAACATCACAATGAACTCGGCAACATTTGGTAGGACGTGACCTTTTGGGTTGATGGCAGTAGAAACAGCCTAAATTATTTAAACCAAATCATATACAAGAGAAGAGAAAATATCTTTGTCAACCACCATATAGAAAAACAAATAACTCTCATATATCGCTTTGTTTTCTAAGCAAGCATACTTATAATTTGCTACTATCATCAACTAAGTGGCAAATAATCGATGCATGCCAAGCAACAAAGGACTTCTCAATTTCTCATATATGCTCCATAAACTTTAGTACCTATGCGCGATAACAATATTGTGTGCAAGCATTATGTACAAGTCGGTCATGCAATTTTTATTTCATCCTGAAACAAACCAAACTTTGTTTTCTTTTATTATTATGAAACGTTTCTGATTCATCCATCCTATTACTATCAGATATAGATTATTTTTTTCACACCATCAAATATACATAGTTAACAAGATAAACAACATTTTCATGAAAACCTCTCCCCTTTCCACAAAATGTTCAGATTAGAAAATTTTCAAATACCAGAGTAGCCCCCAGCGTGTGCAATTTGATGAACGTGCATTTACTCCTAGCAAAGGTGACGTGGTTTTGTCATTAGTCTGCTGGATGTCTCATCAATGCTATGCATGCAGCAGAGCAACTAGCCAGCGGTTCTCATCTTATCCTGATTGGGCTCCAACAGTTTGCATGCATGCATGTATAAGTCAAATGTCGGAACCCATAACGTCTGAATGTTGTAAGACGACCCACTTTTTGGGAAAGTTAGAAAACACTAAGCCGACCTATTTTGTGGGGAGGAAGTACAGAGTACCAAGAATGGAGAAAATCCTCCTCTTTTTGGTTCACATTGACCTAATCCTTTCATAGGAACTCAGACCCAAATGCACGCATCCCGTGATTAGTTCAGAATAACTTTGATGTGAACAGAATTAGTTACTTACATAATCACGCACTCAGAAAATTCTTTTGTTCACGACAGGTTTACAGTGTTTCCTTCCATTCACTATTAAATTGATCAATTCAAGTAACTTGGGCACAAACTTACAGCAACACCGCATTTTAGGCCACAGTTACAGTATACGATTTTTCACCATTCGCAGACAAAACGAACAACAAAAGGCATACCTCTTTGTTGGGCGTGATCCGCGGGAGGACCTCCGCAAGCCGTTCAAGCCCAAGTCGGCCTTTCTCGGCGAGTTGCACTTCAAACTCAAGTGTCCTGAGCCTAGCATCGCGCTGCCGGCTGGACTTCTCGTACAGCTCCTTGTATAAAGGGACTTTCCTACCCACCACTTTCGCCTTCGCCTCTTCCTCTACATCTTGCTCATCCTCCTTGTCCTGCCTTATATCCTCATTGTCATCGACCATGACCACCTCAGGGATAGCTTCCGTCCCTCTCGGAACATGGACGGCAGGAGTTGGCCGCGGGGGGTGGGTAACGCTATAGACGAGGTCCGCGTACTGGTCGAGGCCAAGAGGTTTAGGTGGTGGGGACGGAGAGTACCACGGTGGATTGGAGTTGGGCCGGCTATTGCCACCGCGGAAGGAGCGGCGGACGCGCTGGGGCCCATGGATGGGGCGCGAGATCGGCGGCGCCGGGGGAAGGCGGCGTCTGGGGTGCGGCAGCGACGAGTGGGAGGAGGTGGAGGCCGTGGCGGCGGCGGCCGCGGCGGAGGAGGAGGGGCCCGGCGCGGCGGAGGAAGGCGAGGCGTAGTGGAGAGGCGGAGGTGAGGAGACGGGGAGGAGGGGCGCGAGCTTGGTCCTCTTGGAGGGAGGTGGAGGGGAGGGCGGGAAGGAGGGGTGGAGGCGGTGGTCGGCGGAGACGCGCTTGCGGCTGTCTGTGAGGGCGCCCATCGCCGCCGGTGGAAACCCTAGCTAGGCGAAATTGGGCCTGCCTGCCTTCCCCCGCTGTGTTCGGGCTCGGCCGCTTCAGATCGAGCGGCAGAAGCACAGCGCGGGGGCTTCGACGAAGCTAGGAATCGCTCCTTTTTCCTCTTTTCTTCCCATCAAATTAAATGAGGTGCTATTTTGGATCAGTACGAATTCTCCTTCCAGGATGATC
CDS Sequence
- >BRADI_2g12720v3
ATGGGCGCCCTCACAGACAGCCGCAAGCGCGTCTCCGCCGACCACCGCCTCCACCCCTCCTTCCCGCCCTCCCCTCCACCTCCCTCCAAGAGGACCAAGCTCGCGCCCCTCCTCCCCGTCTCCTCACCTCCGCCTCTCCACTACGCCTCGCCTTCCTCCGCCGCGCCGGGCCCCTCCTCCTCCGCCGCGGCCGCCGCCGCCACGGCCTCCACCTCCTCCCACTCGTCGCTGCCGCACCCCAGACGCCGCCTTCCCCCGGCGCCGCCGATCTCGCGCCCCATCCATGGGCCCCAGCGCGTCCGCCGCTCCTTCCGCGGTGGCAATAGCCGGCCCAACTCCAATCCACCGTGGTACTCTCCGTCCCCACCACCTAAACCTCTTGGCCTCGACCAGTACGCGGACCTCGTCTATAGCGTTACCCACCCCCCGCGGCCAACTCCTGCCGTCCATGTTCCGAGAGGGACGGAAGCTATCCCTGAGGTGGTCATGGTCGATGACAATGAGGATATAAGGCAGGACAAGGAGGATGAGCAAGATGTAGAGGAAGAGGCGAAGGCGAAAGTGGTGGGTAGGAAAGTCCCTTTATACAAGGAGCTGTACGAGAAGTCCAGCCGGCAGCGCGATGCTAGGCTCAGGACACTTGAGTTTGAAGTGCAACTCGCCGAGAAAGGCCGACTTGGGCTTGAACGGCTTGCGGAGGTCCTCCCGCGGATCACGCCCAACAAAGAGGAGGTGCCTGAACCTTTTGTTCCTCTAACGGATGAGGATGAGGACAATGTTCGTCATGCTCTTGGTGGCAGGAAAAGAAGTGAGACATTGTCGGTCCATGAAGCTTCAAATATTGTTATAACAAGAGAGATCTTGCAGTGCCTGAATGATAAAGAGTGGCTGAATGACGAGGTGATAAATTTGTATCTTGAACTCCTGAAAGAAAGGGAACTGAGAGAACCCAACAAGTTCTTAAAGTGCCACTTCTTCAACACCTTTTTCTACAAGAAGCTGATTAATGGTGGGTATGATTATAAGTCCGTTAGGAGATGGACAACGAAAAGGAAGTTAGGGTACAACCTGATTGATTGTGATAAGATTTTTGTCCCCATACACAAGGATGTGCATTGGTGTTTAGCAGTCATCAACATAAAGGAGAAAAAGTTCCAATATCTGGATTCACTTGGCTACATGGACATGAAGGCCCTGAGAATCTTAGCCAAATATCTTGTGGATGAGGTAAAAGACAAGAGTGGCAAACAGATAGACGTTCATGCATGGAAGCAGGAAGGTGTCCAAAACCTTCCTTTGCAGGAGAATGGGTGGGATTGTGGCATGTTCATGCTTAAATATATAGACTTCTACAGCAGAGATATGGAGCTTGTTTTTGGACAGAAACACATGTCTTACTTCCGGAGGAGGACTGCAAAAGAAATCTTGGATTTAAAGGCTGGATAA
Protein Sequence
- >BRADI_2g12720v3
MGALTDSRKRVSADHRLHPSFPPSPPPPSKRTKLAPLLPVSSPPPLHYASPSSAAPGPSSSAAAAAATASTSSHSSLPHPRRRLPPAPPISRPIHGPQRVRRSFRGGNSRPNSNPPWYSPSPPPKPLGLDQYADLVYSVTHPPRPTPAVHVPRGTEAIPEVVMVDDNEDIRQDKEDEQDVEEEAKAKVVGRKVPLYKELYEKSSRQRDARLRTLEFEVQLAEKGRLGLERLAEVLPRITPNKEEVPEPFVPLTDEDEDNVRHALGGRKRSETLSVHEASNIVITREILQCLNDKEWLNDEVINLYLELLKERELREPNKFLKCHFFNTFFYKKLINGGYDYKSVRRWTTKRKLGYNLIDCDKIFVPIHKDVHWCLAVINIKEKKFQYLDSLGYMDMKALRILAKYLVDEVKDKSGKQIDVHAWKQEGVQNLPLQENGWDCGMFMLKYIDFYSRDMELVFGQKHMSYFRRRTAKEILDLKAG