Information report for BRADI_1g74597v3
Gene Details
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Functional Annotation
- Encodes a nuclear-localized RRP6-like protein whose mutation leads to accumulation of an rRNA maturation by-product.
Homologous
- Arabidopsis thaliana — AT5G35910
Gene Resources
- Pfam: PF01612 PF00570
- UniProt: I1H9J4
- RefSeq: XP_010229177.1
- EMBL: CM000880
- KEGG: bdi:100829771
- OMA: VYALHQW
- InterPro: IPR002121 , IPR002562 , IPR010997 , IPR012337 , IPR036397 , IPR044876 , IPR045092 , IPR049559
- PANTHER: PTHR12124 , PTHR12124:SF67
- SUPFAM: SSF47819 , SSF53098
- PROSITE: PS50967
- Gene3D: 1.10.150.80 , 3.30.420.10
- OrthoDB: I1H9J4
- CDD: cd06147
- eggNOG: KOG2206
- STRING: 15368.I1H9J4
Sequences
gDNA Sequence
- >BRADI_1g74597v3
AAAACATGAAAACAGGAGACGAGCAAATGTTGTTTGTTTCTCTTCAAATCTCAGCTATCTATACCAGTTTTACAGTATACCGCCTGTGCAATTTCAGTATCCACCATTGCACAACAACACCAAACATGTCTGTCAGTTGCTACATACAGATCCAATCCAGATGCAAGCTTACATGTCCCTGCTTCTACTGTCAATGACTCGAATGCTATGGGCTATTCTCACATTTCTGTTAGTCCAACGCCAGAATTTCGGGGAGGCCTAGCTTCTCGTTTGAGAGGCCACAGGTAAAAACATCCCATTGTTTTTTCACTCTCTACAATTATCTTCTGCACAGCAGGATGAATCAGAGGGGTTGTCGATCACTTCAGTTACCCGCAGGAGGGAAATGATGCTGTCTTGTTGGGTCCTGTGAATCACCTTCCCTATTTGAAGCAGAAGGATGACCTGTTCCTGTACTTTGGTTTATCGATGGAAAGCCGTAATAACAACCAGACAGGTACCCAGGGGCCTCTAAGACTTCAGGTTCAGGATGGCTCCATCCAATTACACTGCTATATTCTGGAATCTGGGGGTAGTAAAAACCTGATGCCTGCAATCTCACAACATAGTTACCATGTTTTCCCAACTCCCTTACAGAGTTAATAGGGAAAAGATAAAATTACTTGCAGCAAAGTACAGATGTAAAACATAAAATGGTGATACTTCATAGAAGTCAATGAAAGGAACGATGAACTGAACTGAACATACTAAGAATTTAGAAGTTAACAAAATTTGAAAGGGTTGCAAACATGATGTAGATCTGCTGGCATATTTTTTTTCTGTAAAATTTAGCAGTCAACATACAGTGAACGCTTCTTTTTAAAGATCTATTCAAAGCCTAAAGGCAAACATTCTGAAAAAGGGCACCAAGTTACACAATACTGACGACTGGCACACAGGACTAATGATGTGTTATACAGCTATGTCTATCTGTAACTCATCAACAGCATTTCAAAACACAATAGTACATCAATGCGCAAAGGTTAGGTATTTTAATGGATATTCCAAACTTGACCATATACCTGCTCATTTGAAAATCCTCCAAAGTAATCTGTCTGTATTACAGATGCTGAATTTCCTACCTGATCTCCAAAAGATGCAGGACTCTTCAGTTCTTGAACAGTAGGCTGTGTGTCCTGCACAATCCATCTATATTAAAATATGCAAAAACCTACAAATACTATAATTATGTCTCAGATGCTTATTATTGCTCACCACTTCCTTATTTATTGGTCTACTCAAGCCTGCTAAGGTCCAAGAGGTCTTATTGTCAGATGATGATATTGTTTGAGTGTTGTCATATAGCCGGATAGCACTATTTGAGGCTGTCTCACTCATAAAGCTATCCCTGTTAGAAGTAAGACTGATATTTGAAGTTGATGGAGCTGCAGAATATTGGTCAGCAGGATCAGGATTCATGCCCACATTATCAGCATCAGAAGGAACCATTTCGATAACTTCACCACTGGCCAGTATACTTTTCAAGTCTAACTGCGCAAGATTGAATATATTTCAAATTAAGTCCTTAAAAACCAATGCTAATACTCAGCAACAGTCTCGGTAACATATAAATGAAGAATTAAATAAAATCCATAGGAGTTCAGTCTAACTGACCTCACCCAGCCGTGCCTTCTTTAGTTGCTCAGCTATTGCTTCAAAGGCTTCAGAATTTTCAGTTGCATTCCACACAATGTCCAGGATTACGTCAAAATTAGCCTCAACAAATGGATATTTCGATTTCACAATTCTTTGTAACTCTGCAGTAGATGTAGGCATCTTCTTTGCTTTTGAATGCAAAAGGAGGAAAAAAGTTAGCCTGACCAATATATCAAGTTTTGCAGCATAACAACTCAAACAAATCAGTAATACCTATCTCAATCAAAGCCTTATTTGGTAATACATAACCAGTGCTCTCGTCTTCTTGACGAGCTGTATAATCTCTCCACTGATGTAGAGCCTGAGCATGGAAAACTATATATCTTAGATGATCATTACATGTAAATGCAAATTGAATAATTTTGACAAAGTTCTTATACTCCATTGACGTACTAAAAAGGCTTTCAGAAAGTTAAAATGACCAAAGTTATTTCCTCGCCAAAGTTAGTCAACGGCAAGATTTGGTGCCACACAGCTATAAAATCATAGAAGTGGCATATCATATGCTACCATGCTAAGTCAATTCCCGAAAGAATAATCATGCGGGATACGTAAAGAAGAAAGTATTTTCTTACAGAAACAACAGCCAGCTGAGCTGCTTCCAATTCATGTTCCTGCAACCTGTAATAGCACACTTGAGTTAAGCACATACTACAAAGGCGAAGCACATATCTTTGACATCAACAAAAATGATTTCCCTAAAGATAAATCAAGTGAATTAACTGACAGTAACAGCACACAAACCCGTATATATGGAGATATGATGTATCTGTCAGCAGCTCCTTCTCATACAACTGTAAGCAAATTTCATTACTGCGATTTTGAACCTGCAGTAACCAAAAACTAAAAATCAGAATGCCTGCTTTGAATCTTTGATACTCTTGTCAGCCAAAATGACAACCATCAATAACATCCAAACCAAAGATTTATGTATAAAAAAGAACATTATGGCGAACAGGCCAACTTTTAAGCTCTGTCATATAAATCTGAATTAATGGTTCATTCAGGAAAGCAAACAGTGCTCATTCATATTAATTCAGCAAATCAGATCAAAACAAAAAGAAATATAGAACAAAAGTTTAACCTCTAGAAGAAGATCGTTTTCACAAGTCGATTCCTTTTGTAGTCTAAGTCTCATCAAGTCATATATATACAACAGATAGTGTGTATCTTCTCTAGCATATCTGCACAGGGGTAATCTCAAATGGATATATTGACATAAATAGTGAAAAGAAAGAACAATAGCAAAACGGAAGGAAACAAAATATATGGTCAATATTCGTACTTGATCATTTCATCAGAAAGTGGCCTTGACCTCCAATCTGCATTTTGATATCTACATGAAAATGTTTACTTTGGTCATAGTCAAAACTCATGGTTATAACTAGCAAGGTCAGCATGGGTATTTCTAGAATTTATGAGTAAGTGAGCTGTATACACTTTATTCGCTGTGACTCCACAAAAGTGATGCAATAGGTGTTCTAGGCTGTTTCGCTCCATCTGCAGGACCCTCGAAGCCTGATTGAGAGGTGTTCGACAGGAAAAACAAACTTCAGCTAATATGACAAAATGTAGTTTTGAAAGGAGAATGTCGAAAGGCACAAACTGAAAGCGACACTCAAGAATTGTGGTATTAGCAGTCCTATTTTTTTGCAGTACCTGTCCTGTGTCAAAAAGATTACACACATATATCCTGAAGTCCCGTTGGAGCCAGATGATATCACGATCTGCCCCATGCATTACCTATGTTCCCAAGAACAAATGAGTAAAACAAAAATTGAGTGCATAAAGGATGCCAAAATTACAGTACAAAATAAACCTTTCTCTTGGTTGGATCTTTAAAATGTTTTTGCAAGTAGGGACCAAGGTATATGCGAAGCTTAAGGGTGTCAACAATAAAGTCCTCTGTTCTTGTTGAAATCTGCATCAAGCAGGTCAAACCCTGAAATGACCTATATTGATTGTGCTCCAAATCAACCTGAAAAGAGCACACAGAATAAATCAAGTTACGTTGATAACAGCCACCAAGGACTCAGAAGTTTTCTAGTTCCATGTTGGATGATGAACCAAATATAAAAAGGCTCAAAAAGGTCTTCGATGAGAAGACAACACGAGTAAATATGGAATAGGTTCATGTTAGAAATATAGGGCACTGCAGTCAGACCAGGCAAGGGAACAGAATAAATAGAAACAACTATCTGTCATCAAAAGAAAGTAGAACATATTGATTTCATTGAATTCCAAAGTCAAACACAGATATATGATCTTCCAGTTCTGGATATATGATCTAATCCTAACAGAATCCAATGGATTTATGGCTGGAGATTGATGATAACTGATAACAGGCAAGACAGAAACACCTAAGAACTATGATAAGTGATCTTGTCAGAAAGTTCTAAGGTAACAAAAGATCAACAGCAAAATATGCTCTTGGCTGGCATTGTCTTGGCTGGCATTGTCTTGGCTGGCATTGTATGCCGAACTCAATTAGAGCAAATAAGAGCTACCAAATGACAATAACTACAGCATTTTGTTGAGTAAATTACTGCCGCGACTTATGTGCATAACTTATATCTGATAGCAGGAAGCAATGTCAAGAGAAGCATTGCTATTATTGTACTAGAGAAGAAATGCATGAGATGTAAGACAATATACTGACAAAGCTGAAATTCAATACAACATATGCAGAAAACAAGTATGATATCGATTAATTTGAAATTTAGAACAAGACTTAATTACAAATGCTTACAGCAAATTCATTTACATCCTTCAACTTGTCAACTAATTCCATTAAGCCTTTCAGGTCTTCTACTAGCGTAAACGGGGAATCCTCTACATCAGCTGGTCTTACTGGTTCAATTTCAGGAACATTTCTGTCAATAAGCTGTTCCAGAGGCAATTTTTCCTGCAATAAGATAAGCATATCTACATCAATTTAAGTACATAAGCATGCATCAAACCAATCAATGTGCAATTTAGAAGAACAGATAGAACTTTGAAAATCAAAACATGGTACATGAGCATCCATACTTTTTCTCAAACCCGCACCGTCAATGTTACTTGGAAGAAGGGCCAAGACGGCCAAGTTTTACAAACACCTGGGGAGCCAGGCTGTAAAAACCAAACAAGAAGAAAAGAGAAATGAACAAAAAGAAAATAAGAAGGAAAAAGAACTGCACAGCAAGAACTAATTATCTTGTATCAAACCAATCTCAAGAAAAAGAACTGTACATCAAGAATTAGCATCCATAATAACTCCCTTGTTCCACTCTACTACAAATGCTACCTTCTTTTCTCGTGAAAACAAAGACGTGCTATCATGAACTCGTCATTTGGAGTTCATGTAAGTCCAAACTACTTAGGCTCCATTTGACATGGCGGTGGATTATTATAATCCCCATTTTTTCACCCGCTTTTTACTATTTTCGTGTTTGGCTAACCAACTTTTCACTACTTTCATGTGTATTTTTCCACAGCAGATTATAAAATAATTTTAGCGCAGCACATTTCAGCAATGCCAAACTGAGCCGTACTCATGACATAGCTTCTAAAACCATAAGCAACCAAGAGATCAAAAAGGACCGTCAACATCTGATCAGATTCTGTAGACGTTCGCGGTAGTAACACCGATGCAGTGAACCAACAGATAAATCTGAAGTAAAACTATTTTAAGTCCATCCAAATCTCACGCTTCCATCGAAGGATTCGTAGTCCCTCCAAGCCGATCGACAAATCAAGCCACAGAAAATAGGAACGGAACATACAGAACGGAGGACACGAAGCACTAACCAATGGGTGGATACGCCGGGTGCCATCTTCGCTTGGCTCCAGCCAGACATGATCGAAGGGCAGGTTGCAGTTGTTCACTCTGATCAAGTACACGTCCTGCGGCCGCGGGATGCTGGGATCGTGGTAGGCCACCCTGGCCTTGGCCCCCGCGGGGGCCACCCCGAGCGGCCTGTCGCCGCTGGTGGCCGTCCTCGCCGACGACGCGGCCCCGGGAATGGCAGCAGCAGCAGAGCCACTGGCGCCGCCACCGCCGTCCTGCCCGCTTGGCCTCTTATTCTTCCTCTTCTCCCCGTGCGCCACCTGGGACCCGTCCCCCGCCTCCTCCTCCTCCGCCTCCCTCTCGCCTGCGCCCTTGGACCCGTCCATGGAGGGAGCAGCGTCGCAGACGAGCTCCGCTGCTACCTCACGGGACGAGCGGCGATGGAGGCCGAGGAATCGGCGGACGCCCTGCTCCGCTCCGCTCCGCCTCCGCTCCGACGGCCGAGCGAGCAGGTGTGGTGGGTTGGGGGCTAGGGTTTTGCGCGTCTGGGTCTGTCGCCGCCGCTGGGCTGGGGGAGAATTGAGGTGTCCGGGAAGGAACAGAGGGACCCGAACCCGAGGGCGAGGGGAAGAAACGGTGGGAGGGAAATGGCGGTTTCTCGCTCGGCTCCGGGGCACGCAGGTCGGCCTCTGCCCCTTTTTATTTATGGACCCGGCGGGGCGCCGGCCTGCCGCCTCTCAGGTGGCACGCGTGACGCCGGCTCTCCGTTCGGTGGCCTTTTTCCGGCTCTGCTCGTCACCAGCTAGGAGCTCCTCTGTTCGTTGCCCCGAATGTCCAGCACAACATTTTCTCCTGCGATTAATATCGTCACCCAAATCTAATCTTAAATCCAAATATGCCCTCCTTATCTTACG
CDS Sequence
- >BRADI_1g74597v3
ATGGACGGGTCCAAGGGCGCAGGCGAGAGGGAGGCGGAGGAGGAGGAGGCGGGGGACGGGTCCCAGGTGGCGCACGGGGAGAAGAGGAAGAATAAGAGGCCAAGCGGGCAGGACGGCGGTGGCGGCGCCAGTGGCTCTGCTGCTGCTGCCATTCCCGGGGCCGCGTCGTCGGCGAGGACGGCCACCAGCGGCGACAGGCCGCTCGGGGTGGCCCCCGCGGGGGCCAAGGCCAGGGTGGCCTACCACGATCCCAGCATCCCGCGGCCGCAGGACGTGTACTTGATCAGAGTGAACAACTGCAACCTGCCCTTCGATCATGTCTGGCTGGAGCCAAGCGAAGATGGCACCCGGCGTATCCACCCATTGGAAAAATTGCCTCTGGAACAGCTTATTGACAGAAATGTTCCTGAAATTGAACCAGTAAGACCAGCTGATGTAGAGGATTCCCCGTTTACGCTAGTAGAAGACCTGAAAGGCTTAATGGAATTAGTTGACAAGTTGAAGGATGTAAATGAATTTGCTGTTGATTTGGAGCACAATCAATATAGGTCATTTCAGGGTTTGACCTGCTTGATGCAGATTTCAACAAGAACAGAGGACTTTATTGTTGACACCCTTAAGCTTCGCATATACCTTGGTCCCTACTTGCAAAAACATTTTAAAGATCCAACCAAGAGAAAGGTAATGCATGGGGCAGATCGTGATATCATCTGGCTCCAACGGGACTTCAGGATATATGTGTGTAATCTTTTTGACACAGGACAGGCTTCGAGGGTCCTGCAGATGGAGCGAAACAGCCTAGAACACCTATTGCATCACTTTTGTGGAGTCACAGCGAATAAAGTATATCAAAATGCAGATTGGAGGTCAAGGCCACTTTCTGATGAAATGATCAAATATGCTAGAGAAGATACACACTATCTGTTGTATATATATGACTTGATGAGACTTAGACTACAAAAGGAATCGACTTGTGAAAACGATCTTCTTCTAGAGGTTCAAAATCGCAGTAATGAAATTTGCTTACAGTTGTATGAGAAGGAGCTGCTGACAGATACATCATATCTCCATATATACGGGTTGCAGGAACATGAATTGGAAGCAGCTCAGCTGGCTGTTGTTTCTGCTCTACATCAGTGGAGAGATTATACAGCTCGTCAAGAAGACGAGAGCACTGGTTATGTATTACCAAATAAGGCTTTGATTGAGATAGCAAAGAAGATGCCTACATCTACTGCAGAGTTACAAAGAATTGTGAAATCGAAATATCCATTTGTTGAGGCTAATTTTGACGTAATCCTGGACATTGTGTGGAATGCAACTGAAAATTCTGAAGCCTTTGAAGCAATAGCTGAGCAACTAAAGAAGGCACGGCTGGGTGAGTTAGACTTGAAAAGTATACTGGCCAGTGGTGAAGTTATCGAAATGGTTCCTTCTGATGCTGATAATGTGGGCATGAATCCTGATCCTGCTGACCAATATTCTGCAGCTCCATCAACTTCAAATATCAGTCTTACTTCTAACAGGGATAGCTTTATGAGTGAGACAGCCTCAAATAGTGCTATCCGGCTATATGACAACACTCAAACAATATCATCATCTGACAATAAGACCTCTTGGACCTTAGCAGGCTTGAGTAGACCAATAAATAAGGAAGTGGACACACAGCCTACTGTTCAAGAACTGAAGAGTCCTGCATCTTTTGGAGATCAGGTAGGAAATTCAGCATCTGTAATACAGACAGATTACTTTGGAGGATTTTCAAATGAGCAGGCATCAGGTTTTTACTACCCCCAGATTCCAGAATATAGCAGTGTAATTGGATGGAGCCATCCTGAACCTGAAGTCTTAGAGGCCCCTGGGTACCTGTCTGGTTGTTATTACGGCTTTCCATCGATAAACCAAAGTACAGGAACAGGTCATCCTTCTGCTTCAAATAGGGAAGGTGATTCACAGGACCCAACAAGACAGCATCATTTCCCTCCTGCGGGTAACTGA
Protein Sequence
- >BRADI_1g74597v3
MDGSKGAGEREAEEEEAGDGSQVAHGEKRKNKRPSGQDGGGGASGSAAAAIPGAASSARTATSGDRPLGVAPAGAKARVAYHDPSIPRPQDVYLIRVNNCNLPFDHVWLEPSEDGTRRIHPLEKLPLEQLIDRNVPEIEPVRPADVEDSPFTLVEDLKGLMELVDKLKDVNEFAVDLEHNQYRSFQGLTCLMQISTRTEDFIVDTLKLRIYLGPYLQKHFKDPTKRKVMHGADRDIIWLQRDFRIYVCNLFDTGQASRVLQMERNSLEHLLHHFCGVTANKVYQNADWRSRPLSDEMIKYAREDTHYLLYIYDLMRLRLQKESTCENDLLLEVQNRSNEICLQLYEKELLTDTSYLHIYGLQEHELEAAQLAVVSALHQWRDYTARQEDESTGYVLPNKALIEIAKKMPTSTAELQRIVKSKYPFVEANFDVILDIVWNATENSEAFEAIAEQLKKARLGELDLKSILASGEVIEMVPSDADNVGMNPDPADQYSAAPSTSNISLTSNRDSFMSETASNSAIRLYDNTQTISSSDNKTSWTLAGLSRPINKEVDTQPTVQELKSPASFGDQVGNSASVIQTDYFGGFSNEQASGFYYPQIPEYSSVIGWSHPEPEVLEAPGYLSGCYYGFPSINQSTGTGHPSASNREGDSQDPTRQHHFPPAGN