Information report for BRADI_1g67160v3
Gene Details
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Functional Annotation
- Encodes a protein containing Leu-rich repeats and a degenerate F-box motif. Associates with AtCUL1, AtRbx1, and the Skp1-like proteins ASK1 and ASK2 to assemble SCF COI1 ubiquitin-ligase complexes in planta. A single amino acid substitution in the F-box motif of COI1 abolishes the formation of the SCF(COI1) complexes and results in loss of the JA response. Required for wound- and jasmonates-induced transcriptional regulation.
Homologous
- Arabidopsis thaliana — AT2G39940
Gene Resources
- Pfam: PF18511 PF18791
- UniProt: I1H754
- RefSeq: XP_003558282.1
- EMBL: CM000880
- KEGG: bdi:100845226
- OMA: WIDQISH
- InterPro: IPR032675 , IPR041101 , IPR041567
- PANTHER: PTHR16134 , PTHR16134:SF119
- SUPFAM: SSF52047
- Gene3D: 1.20.1280.50 , 3.80.10.10
- OrthoDB: I1H754
- CDD: cd22159
- eggNOG: KOG1947
- STRING: 15368.I1H754
- HOGENOM: CLU_022456_1_0_1
Sequences
gDNA Sequence
- >BRADI_1g67160v3
CAAAAATCGTAGCAAATATCAGAAGTCCAAACATCGTAACTGGTAAAGCAGTGGCAAGTCGAAGCAAAATTCCAGGACATCGTGTGGCTGGTACAAAACGTAACAAGTCTGAATGGTACAACAACTAATCCAACACGGTAGTTCATAGAGCAACAACAATACAATGGGGGCAAAGCTAAACAGGAAAAATGCCAAGAAACATTGGAACTGGGTACATTATTACAAAAATGTGTGTCCAAGCCCAGTCAAAATGGTATAGTACACATATCCATGCTGGCCAGTTGGGCTAAGCTTACGCTGAAATGTTGTTCCTCAGATATGAAGACAGTTGAGAGCGGGTCGCTTTTCCTCAAGCTTTCAGTTCTGTAATTGGTCCCGTGCAGTGGAATCTGCACTGAAAGCATAATAGGAACGCCAGGTCTGCAGATATTTTGAACAATATAGAATCTGCACTGTACCGTGGGTTTCACAGTCTGGCATCAAACATGTATGTACACTCAAACTGGTGGACGTTTTAGATTCAAACTGATGGATAGAGGGGAATTACGGACTGAGGGCAATCTGTCCTCGCCCCGGCCAGAGAGTAGTATGCCAGAATCTGTGCCTGGCCCTCTGGGCAAGGCTCATCTTGTTTAGGTGCAATAAATTCGATGTTCCAAAAGGGTCGTACCATCGCCATGAGATCAGTGCCAGTCGAAGATGCCTTGTATCCCTGCACCCATAGATATCTGAGTGACTTGAGCTGTAACGCAGCAACGGCCAATGCACGTTCACTAAAACAGCAACTTCTTAGCTCCAATTTCTGCAAGCTTGGGCATCCTCTTGAGAATGCTAGCAGTCCATCATCAGATTCCCCAACATTCCCAAGCAACATGTAGCGGACGGTCTTACTAAATTCACCAACATAGGAAAGACCAACATCTGATAAAGCTCCAGGTCTCACATAGAATGCAAACCTCCGGAGTTTGGTGCAGCCTCTCAGCAAAGCACGAACACCGATGTCAAGGGGCAATTCAGTTATATGCAGTTCTCTATCAAGCAGGACAAGTCGGAAATCGTTAAGGTTTTTGCTGAACGAACCAATGGCCTCAAGACCAGCATTTGTAATGTCAGACACATGAACCGCCCAGTACTCCAAATCAGGGCAGCCTTCAGCTACAGCCCTCAATCCCACCTGTGTGACCCTACCATGTTCGTCCTCAAGACCTCCTTGGTCATCATCCCCCCTCTCTACTCTGAGTCTCTGCAATTTCTTGCAGGTCCGTGCAACAACTTCTAATCCTCGATCTCCTATCACATCTCTCACCTGTTCATACACACAAGGAAAAACAAATCATCAACACATCATGTTTCAAATATCATATTTACTATCCAAACTCGAAACAGTAGACATAGCAAAAACACATGTAAATGATATGCCAAAAAATACCTCCAAAACTTCTAGATTAGGGCAGCGCTGAACTATTTGGCAGTGATCCTCTGTGGTAAGGAATGTGAACTGAAGGTCTAACTTCTTGATTGCAGCACCATATGGAAATAGTATCTGCATCTCATTTGTTCCCATGTAGAGCAAACTCAAGCGGTGTAGCGAAGGAGGGAAATAGTAGTTTCCGTAATTTCTACTCTCCCCACCTTGATCCTGATCCTCAAAGGAACCACCGGCGAAGTCTTGTAGTGTTTGTGCTGTACGGAACAAATCGACCAGGTCAGACATGAAGCAGTCGCTGATCTTCAGAGTTTTCAGCCTTCGGCAATTGCGCACAAGGAGGACAAGATATGCTGGTGACACTCTGAGATCCGTCAAAAAGAAATTCAGTGTCTCAAGGACAGTATTGCTGGTAGCAAGCTCGTGAAGCCATTCATCATTTTCTTTCTCAGCAATCGAGCTTTCTTCAAGGAACAATGTTTCCAGTTTTCTGCACATGACAAGAAACATGTCTAGTTAAAAACTAGTAGCCTATGAAGGTATGCTCCTACTAAAAATCTACAGACTATTCTGATTGTATGTTTTGGTCAAAACTATCTGAACCAAGTATCAGATCTGTATATTTTCTTTGTCTTCATCTTTTCTCTTATAAAGATCTTTTTCTCTTATAAAGATCTGAGATGGTGACAGCGCCTAGTTCCCCTCTTGAGCTCCAGGAAATTATCACAACGATCATCCATTCAATGTGTGTATGCATATGTATCACGATATTTTGAACAGTTGATTCAATAGGTGCATTTCTTGACATTTTTTACATTTTGCCCAAAGTTGGGTGCTGATGGTTAAACAACTCATGCGATACAAATAAAACTTCCGTAGCAGCCTAGTATTTAGCTAGTGAACCAAACAAGTTATGCAAAGTCCTCGTCCGCTATAAAAACTAGAATTAAGGCAGTTAAACTCTACATTTCCTTATTCATATTCCAAAGCAAGAACTCTCCCCAAATTCCAAATAGTACCAAGATGGTTTACATCATGTACGTTGCATGCCCTTACCTTCATTTACTCAGGGAAATAAAATCCCACTTATCTATTTACCCTTCAAAAACATCTCATCAACAGAAAAACACCATTTCCAAAATGAAAAAAAAACATGAAATAGCAAGCTGAAACTGGGATGGACCAAAACAAGGCGAAAAACTAAGTAGTAACAAGCGACAAGTAAAATCAACAAATTAAAACGGGAGAGGATAAATTACTTGCAGCAACGGGCGAGGAGAGCAAGGGAGGGCGTGGAGAAGCCGGAGCATCGGTCGAGCTTGAGCGACACAAGCATGTGCGCCTTGGCGCGGACGAGAACGTCGAGGTCGTCGTCGGACACAATCATCCGGCGGAGGTGGAGCACCTTGAGGAAATGGAAGGAGGCCGATAGCTGCCGGATCCAGGGCGAGGCGGAGCCGCCCCAGTCCTCGGGGATGAGGTTGAACATGGAGGCCCGGGGCTTGGCCTTAAGCTTGAGGGACTCGAGGCATGGGAAGCGACCGAAGAGGCGGTCGGGCGTGGTGGAGTAGGCCATGGCCACCGTGACGTGCTTCCGGCTGAGCGCGTCGACCCGGTTCCAGTGGCGACACACGAGCGAGATGGCGTCGCGGTCCCAGGGGTCCTCCACGCACCCCATCACCAGCCCTAGCGCCACGTCCGGGATCCCGAAGCTCATCGTCCTCCCCAGCTGCCGCTGGTCGCCGCCCATAACAGGGGAGCCCGCCGGCGCCGCCTCCCGATCTGCCTCGTCTCGGTCTGCTCCGCCGCGGATTTCAACGGATTGGGGTTGGGCGCGGTGGTGGGGCGGGCGGGGTGTGGAGTAGAAGCGGATGGGGAATTTGGAATGGGGAAATTTTAGGGGTTCCGGTCGTCCGGACGACGCGAACAGGCCTTTTTCTTCGGGTGTTGTGCGGCTACGCGATGGGGGCGGAGCTGGGC
CDS Sequence
- >BRADI_1g67160v3
ATGGGCGGCGACCAGCGGCAGCTGGGGAGGACGATGAGCTTCGGGATCCCGGACGTGGCGCTAGGGCTGGTGATGGGGTGCGTGGAGGACCCCTGGGACCGCGACGCCATCTCGCTCGTGTGTCGCCACTGGAACCGGGTCGACGCGCTCAGCCGGAAGCACGTCACGGTGGCCATGGCCTACTCCACCACGCCCGACCGCCTCTTCGGTCGCTTCCCATGCCTCGAGTCCCTCAAGCTTAAGGCCAAGCCCCGGGCCTCCATGTTCAACCTCATCCCCGAGGACTGGGGCGGCTCCGCCTCGCCCTGGATCCGGCAGCTATCGGCCTCCTTCCATTTCCTCAAGGTGCTCCACCTCCGCCGGATGATTGTGTCCGACGACGACCTCGACGTTCTCGTCCGCGCCAAGGCGCACATGCTTGTGTCGCTCAAGCTCGACCGATGCTCCGGCTTCTCCACGCCCTCCCTTGCTCTCCTCGCCCGTTGCTGCAAAAAACTGGAAACATTGTTCCTTGAAGAAAGCTCGATTGCTGAGAAAGAAAATGATGAATGGCTTCACGAGCTTGCTACCAGCAATACTGTCCTTGAGACACTGAATTTCTTTTTGACGGATCTCAGAGTGTCACCAGCATATCTTGTCCTCCTTGTGCGCAATTGCCGAAGGCTGAAAACTCTGAAGATCAGCGACTGCTTCATGTCTGACCTGGTCGATTTGTTCCGTACAGCACAAACACTACAAGACTTCGCCGGTGGTTCCTTTGAGGATCAGGATCAAGGTGGGGAGAGTAGAAATTACGGAAACTACTATTTCCCTCCTTCGCTACACCGCTTGAGTTTGCTCTACATGGGAACAAATGAGATGCAGATACTATTTCCATATGGTGCTGCAATCAAGAAGTTAGACCTTCAGTTCACATTCCTTACCACAGAGGATCACTGCCAAATAGTTCAGCGCTGCCCTAATCTAGAAGTTTTGGAGGTGAGAGATGTGATAGGAGATCGAGGATTAGAAGTTGTTGCACGGACCTGCAAGAAATTGCAGAGACTCAGAGTAGAGAGGGGGGATGATGACCAAGGAGGTCTTGAGGACGAACATGGTAGGGTCACACAGGTGGGATTGAGGGCTGTAGCTGAAGGCTGCCCTGATTTGGAGTACTGGGCGGTTCATGTGTCTGACATTACAAATGCTGGTCTTGAGGCCATTGGTTCGTTCAGCAAAAACCTTAACGATTTCCGACTTGTCCTGCTTGATAGAGAACTGCATATAACTGAATTGCCCCTTGACATCGGTGTTCGTGCTTTGCTGAGAGGCTGCACCAAACTCCGGAGGTTTGCATTCTATGTGAGACCTGGAGCTTTATCAGATGTTGGTCTTTCCTATGTTGGTGAATTTAGTAAGACCGTCCGCTACATGTTGCTTGGGAATGTTGGGGAATCTGATGATGGACTGCTAGCATTCTCAAGAGGATGCCCAAGCTTGCAGAAATTGGAGCTAAGAAGTTGCTGTTTTAGTGAACGTGCATTGGCCGTTGCTGCGTTACAGCTCAAGTCACTCAGATATCTATGGGTGCAGGGATACAAGGCATCTTCGACTGGCACTGATCTCATGGCGATGGTACGACCCTTTTGGAACATCGAATTTATTGCACCTAAACAAGATGAGCCTTGCCCAGAGGGCCAGGCACAGATTCTGGCATACTACTCTCTGGCCGGGGCGAGGACAGATTGCCCTCAGTCCGTAATTCCCCTCTATCCATCAGTTTGA
Protein Sequence
- >BRADI_1g67160v3
MGGDQRQLGRTMSFGIPDVALGLVMGCVEDPWDRDAISLVCRHWNRVDALSRKHVTVAMAYSTTPDRLFGRFPCLESLKLKAKPRASMFNLIPEDWGGSASPWIRQLSASFHFLKVLHLRRMIVSDDDLDVLVRAKAHMLVSLKLDRCSGFSTPSLALLARCCKKLETLFLEESSIAEKENDEWLHELATSNTVLETLNFFLTDLRVSPAYLVLLVRNCRRLKTLKISDCFMSDLVDLFRTAQTLQDFAGGSFEDQDQGGESRNYGNYYFPPSLHRLSLLYMGTNEMQILFPYGAAIKKLDLQFTFLTTEDHCQIVQRCPNLEVLEVRDVIGDRGLEVVARTCKKLQRLRVERGDDDQGGLEDEHGRVTQVGLRAVAEGCPDLEYWAVHVSDITNAGLEAIGSFSKNLNDFRLVLLDRELHITELPLDIGVRALLRGCTKLRRFAFYVRPGALSDVGLSYVGEFSKTVRYMLLGNVGESDDGLLAFSRGCPSLQKLELRSCCFSERALAVAALQLKSLRYLWVQGYKASSTGTDLMAMVRPFWNIEFIAPKQDEPCPEGQAQILAYYSLAGARTDCPQSVIPLYPSV