Information report for BRADI_1g52360v3
Gene Details
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Functional Annotation
- This gene belongs to the CO (CONSTANS) gene family. This gene family is divided in three subgroups: groups III, to which COL9 belongs, is characterised by one B-box (supposed to regulate protein-protein interactions) and a second diverged zinc finger. COL9 downregulates expression of CO (CONSTANS) as well as FT and SOC1 which are known regulatory targets of CO.;Encodes a CONSTANS‐like transcriptional activator
Homologous
- Arabidopsis thaliana — AT3G07650
- Oryza sativa — LOC_Os07g47140
Gene Resources
- Pfam: PF06203
- UniProt: I1H241
- RefSeq: XP_010228152.1
- EMBL: CM000880
- OMA: CECQLCG
- InterPro: IPR000315 , IPR010402
- PANTHER: PTHR31717 , PTHR31717:SF130
- PROSITE: PS50119 , PS51017
- OrthoDB: I1H241
- eggNOG: ENOG502RRQH
- HOGENOM: CLU_028225_5_0_1
Sequences
gDNA Sequence
- >BRADI_1g52360v3
TACTACGTTACAAACCGTTGCACAATGTTACATCCAGTTCACAGCATAATTTGAGAGCAAGCAAAGGAGACTAGATTTCGTGACCAAATTTAGTAAACATGCATGCAAAGTATGCCAGGTAGTAACAATTAGTAGTACAGCTAATTAAGCTAACAGATCGAATAGGGCGGGGGAGTTAGTTATGGATGAGGGATCCAAGTTGCTGGAGAGATCCATCACCGCAAACCGCCGCCGTTGAACGCCAACTAAATCCCTCCACCCTCCGCCTATTAATTTACATCCACCGGGCTGCACTCCGCCGCCGCTAGCTCCCTCGCCGGCCGCCCCGCCCCCGATCGAGCTAGCGGCTGACCCTTTCGATAGATGAAGAGTTGCACCACCAGATCTGATCCGCACGAGCCGCCTGCCCGCCATGGACGACCCCCGCCGCCACCACCACCTCGCCTACGGCGCCTGCAACAACTGCGCCGCCGAGCAAGCCGTCGTCTTCTGCGCCGCCGACGCCGCCAGGCTCTGCCTCGAGTGCGACGGCGCCGTGCACGCCGCCAGCGCGCTCGCCGCCAACCACTCCCGCGCGCCCCTCTGCGACTCCTGCTTCGCCGCCCCCGCCGCCGTCCGCTGCGCCCACGACACGGAGGACGGCGGCGGACAGTTCACCTTCTGCTTCGGCTGCGCCGGCCACCGCGCGCCGCCCGAGGGGTGGGCCGCCAGCTGCCCCGTCGCGCACTACACCGGCTGCCCCACCCCCGCCGACGTCCTCCGCCTCCTCTCCGTCGACGCGCCGCCCGCACAGGAGGACTTCGATGCCTGGCTCGCAGACAAGCTGCCGCAGATCCTACAAGACGTTGTCCAGGTATCTATCTACCACCATGCTCTCATCCATCATTCTCAGCTACCCTACCTGTTTAATTAAGATTCAATCAATCATGAATTACTCCATCTGTCGATCCATAACAAGTGTCGCTCACTCTGTACTAAAATCGGTGAGACGCTTGTTATGGATCGGAGGGGAGTAGTACTTATTGCGATGCGAAATGGCTGCAGTGCAGACTGACGATCACGTCCTGTTTAATTTCGTGAGACGAATTTTAGGGCAACCATCACGCACTCGATTGATCGATAATCCTCAGATGCGCATCGGCACTAGCTAATAGTGTCATTGTGTGTGCAATATATCAAATCGATCGATCGACTGGTGATCCCCCCATCGAGCTCCTGCAGCTTTTCGAATCCATTAAAAGAATATAGTTAATGATCGGTTGTGTTGTGTGGGTGATCTTCTTTTGTGTTGATGTACAGTTCAAATGTGTATGGGAAATATCATGATCATATAATAAGAAGAGATCACATCTACTTGTATAGATATGTTCCACAATTACATGAATGCCTGATTTTCTCTGAATGTCCATTTTGGTGTCTGATATTCTCTGAATTTAATGTCCATTTGATGCTGTGGGGAGTTGGACCTTCATCTGATGATTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTTGAGCGATTAATATTCTTTGGCCCATGCCCCATATAATATAATTGGCAAGAGCTAATTGAATGGAAGGATGAAGGCTGGGCTAATCGATTAATCTCTCTCTCTTACCTGCATCTCTGAACAAAATGTTGAAAGATAAATCATGAATATACTAGCTACATGTAATCAAGTGCCGTGATCATGCATAACACTGGTTCTGTTTTCTGATGGTGGCGTTCATGCACGGAAGGATGGGTCGCAGATTTGCGAAGGTGGGAGTACTGCCCCTAGTACTACTGCTACAATTACAGGTGCAGAAAGATCATCAGGAGGAGGAGCAGGTGTTAATGGCAGCAGCTTTGTTGGTCCTAATTCTGATCATGATTGGAATATCACCACCAATACTGCTACTACTGGTACTGTTGGTCATCATGCAGCTGCTGCAGGAGGAGGAGCCAATCATAATAATTCACTCGCATTTGAGGTAATTAAGGACAAATTAGTTTATTAACCATATGTACATGCATACGCAGGATGTCTGAACTTAGTTTGATTTTCTGGGCAGCCAACACCGTCGTCATCGGTCTGCCACATTTTCTCATCATCATCATCATATTGTTCATCATCGTTGTCATGCCTGCAGCAGCAGTCAGCCATGGCGTCTGCTACTTCTCTCCTGCACTCCTTGGATCCTCAATTGCAGCTCCTCGACGGGGGGGCCGCAGCTGCGGCTGGCTGCAGCTTCGTCCTTCCTCCTGCTGTTGCTGGTGCTAATTTCTTAACCATATCGCCACCACAAGCGCCGCCACCGGATCAGATCAACGGCGGCGAGGGATCATCGACGATGTCGGGGGCTCAGCAGCAAGATCCTACCACCATGACGAAGAAGCGAGAGGAGAGGGACAGGGCCAAGCTCAGGTACAACGAGAAGAAGAAGAACAGAAAGTATGTGTCCTCAATCCAGCCTCTGAATCTTCTATGACAGTACTTGGTCAATTAAAAATGCAGGTCTCCGAATTTTTAATTCGATGATTTTTCTAATTTGAAAAAGATGCCAAATGCAAGTTTGAATGAATTGTGCGTGAATTTTTTATGCAGGTTTTGCAAGCAGATCATGTACGCATCCCGTAAGGCGAGAGCCGACACGCGAAAGCGGGTGAAAGGAAGATTCGCAAAGGCTACCAATGAAAACCAGCACATACTCCACTCGGCTGATTCACCATAAATCCATCCATCCATTCATTCAAAACCAAATTTCCACTTTCTTTCCTTTTCTTTTTGTTCCTGCTCATACACACTGCATATAAAAACACAAAACCAAACATACTCTCATCTCAAAAACATTCATCCATTCATTCAATTTTTGATCGGTTTATAAAATGCTAGCTAGCTGGTCTCCCTTGCCTTGAGTACAGCATACACATTATTCATATGCTTAGGTTAATTAGCTAGAATCTTCTCCACTTGACACATACATATTTTCGTTTTGTGCGGAGAAGACACTGTTGCACCATATTTAGGCCTTCTTCTCTTTTCCCATTTAGTTTGTTTTTCATCTTTTGGCCTTTTTTCGTTTTGACACGATTCCTTTTAGAGAGATATAGTTCTGGGTCGACTCTGTTAAAAAAAGGAGAAATTGTAATAATTCCTAGCCCTTGTCAGCTATATATATACATGGATGATCATTTCTGGCATGGGTGAATAAAATCAAGTTTTCTCT
CDS Sequence
- >BRADI_1g52360v3
ATGGACGACCCCCGCCGCCACCACCACCTCGCCTACGGCGCCTGCAACAACTGCGCCGCCGAGCAAGCCGTCGTCTTCTGCGCCGCCGACGCCGCCAGGCTCTGCCTCGAGTGCGACGGCGCCGTGCACGCCGCCAGCGCGCTCGCCGCCAACCACTCCCGCGCGCCCCTCTGCGACTCCTGCTTCGCCGCCCCCGCCGCCGTCCGCTGCGCCCACGACACGGAGGACGGCGGCGGACAGTTCACCTTCTGCTTCGGCTGCGCCGGCCACCGCGCGCCGCCCGAGGGGTGGGCCGCCAGCTGCCCCGTCGCGCACTACACCGGCTGCCCCACCCCCGCCGACGTCCTCCGCCTCCTCTCCGTCGACGCGCCGCCCGCACAGGAGGACTTCGATGCCTGGCTCGCAGACAAGCTGCCGCAGATCCTACAAGACGTTGTCCAGGATGGGTCGCAGATTTGCGAAGGTGGGAGTACTGCCCCTAGTACTACTGCTACAATTACAGGTGCAGAAAGATCATCAGGAGGAGGAGCAGGTGTTAATGGCAGCAGCTTTGTTGGTCCTAATTCTGATCATGATTGGAATATCACCACCAATACTGCTACTACTGGTACTGTTGGTCATCATGCAGCTGCTGCAGGAGGAGGAGCCAATCATAATAATTCACTCGCATTTGAGCCAACACCGTCGTCATCGGTCTGCCACATTTTCTCATCATCATCATCATATTGTTCATCATCGTTGTCATGCCTGCAGCAGCAGTCAGCCATGGCGTCTGCTACTTCTCTCCTGCACTCCTTGGATCCTCAATTGCAGCTCCTCGACGGGGGGGCCGCAGCTGCGGCTGGCTGCAGCTTCGTCCTTCCTCCTGCTGTTGCTGGTGCTAATTTCTTAACCATATCGCCACCACAAGCGCCGCCACCGGATCAGATCAACGGCGGCGAGGGATCATCGACGATGTCGGGGGCTCAGCAGCAAGATCCTACCACCATGACGAAGAAGCGAGAGGAGAGGGACAGGGCCAAGCTCAGGTACAACGAGAAGAAGAAGAACAGAAAGTTTTGCAAGCAGATCATGTACGCATCCCGTAAGGCGAGAGCCGACACGCGAAAGCGGGTGAAAGGAAGATTCGCAAAGGCTACCAATGAAAACCAGCACATACTCCACTCGGCTGATTCACCATAA
Protein Sequence
- >BRADI_1g52360v3
MDDPRRHHHLAYGACNNCAAEQAVVFCAADAARLCLECDGAVHAASALAANHSRAPLCDSCFAAPAAVRCAHDTEDGGGQFTFCFGCAGHRAPPEGWAASCPVAHYTGCPTPADVLRLLSVDAPPAQEDFDAWLADKLPQILQDVVQDGSQICEGGSTAPSTTATITGAERSSGGGAGVNGSSFVGPNSDHDWNITTNTATTGTVGHHAAAAGGGANHNNSLAFEPTPSSSVCHIFSSSSSYCSSSLSCLQQQSAMASATSLLHSLDPQLQLLDGGAAAAAGCSFVLPPAVAGANFLTISPPQAPPPDQINGGEGSSTMSGAQQQDPTTMTKKREERDRAKLRYNEKKKNRKFCKQIMYASRKARADTRKRVKGRFAKATNENQHILHSADSP