Information report for BRADI_1g26720v3
Gene Details
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Functional Annotation
- Encodes a member of the SPL (squamosa-promoter binding protein-like)gene family, a novel gene family encoding DNA binding proteins and putative transcription factors. Contains the SBP-box, which encodes the SBP-domain, required and sufficient for interaction with DNA. It is involved in regulation of flowering and vegetative phase change. Its temporal expression is regulated by the microRNA miR156. The target site for the microRNA is in the 3’UTR.
Homologous
- Arabidopsis thaliana — AT1G53160
Gene Resources
- Pfam: PF03110
- UniProt: I1GU51
- EMBL: CM000880
- KEGG: bdi:100843215
- OMA: HDQFHEL
- InterPro: IPR004333 , IPR036893 , IPR044817
- PANTHER: PTHR31251 , PTHR31251:SF209
- SUPFAM: SSF103612
- PROSITE: PS51141
- Gene3D: 4.10.1100.10
- OrthoDB: I1GU51
- eggNOG: ENOG502RZTN
- STRING: 15368.I1GU51
- HOGENOM: CLU_065896_1_2_1
Sequences
gDNA Sequence
- >BRADI_1g26720v3
CGACTCTTTTCTCCCAGACCCCCCTCTCCTTCTCCTTCCACACTTGTTGATCCACTCATGAGCTAGCTAGCTAGCTCCATCGCTCCACCTCGCCGTCCGCTTCTCCTTCCACACTTCGTGTCGTCGGACGGCATGGACCGGAAGGACAAGTCCCGGAAGTCCTCCTCCTCGGCGGCGTCCATGGCCGCGCTCGCCGCCGCCGGAGGAGACAGGATGGCGCCGCCTTCTTCCGGCGATGAGGACCAGAAGCCGAACCTGGTGAACGTGCCCGTGGTCGCCACCGGCGCCTCGAGCTCCTCTGCTGCCGCGGTGAGGAGGGGCGGCGGCGGCGGTGCTGCTGGTGGGCCCGTCGCGGTGGGCGGGGCCGGCGCGGGCGGGCCCAGCTGCCAGGCCGAGAGGTGCCCCGCCGACCTCACCGAGGCGAAGCGGTACCACCGGAGGCACAAGGTGTGCGAGGCGCACGCCAAGGCCGCCGTCGTGCTCGTCGCCGGCCTCCGCCAGCGCTTCTGCCAGCAATGCAGCCGGTAAGGCCGTCCATCATGCTCGCCCAAACCCTCTGGCTGTGGCTTTTCGCAGTCGCAGCACGCGGCCGTGGTTTGGAATTATTTGGCAAATTCAAAACCCAAAACCACATCATCTTCTTTAGGATTAATTTGTCTAGTTCTTGGATCCTGTGCCGCGCGTACGTCTGGCTCTTAACTTTGCAACAAAAGTTCTTGCTACACCTCGCGCCAATTATTCCTGGATTACCGCTTAACTTGCGGTGCAAATTCTAAGGTTATGTGTTTACACGTGCACCGTTAGGTTCGCCTCTGATTTTGTTGGTGACCTCAGTAGTCTAATGCTGTAGCCTGTGATAAGAGGCCAGGACAGGTCAGGTTAGCCGTAGAGATTGAGATTGTTGCACCCAACTCTACTCAAGAATTCAGTGCAAGTTACTGTTCTTGGGTGCTGTACATGTAAGCAACTCTGTTTGCATTTCCTCCGGCAGGGTTGTAAAGTAAAACGTAGGATAAGGAAACCTAGCTAGGTTTCACGTCTCATTCTGAGGATTAATTCCTGCTTTGTTAGTGCACGATAGATGGACAAAGACTACCATAGTGCACATCATTGTCCGTGGCTCCGTGGCTGTACACGTTCTTTAGGGGACATGCACTTTTAACCTGTGTCGGTGGCCGGAGATGATCAGAGCTTGGCCTTGCCTTGCCTTTTTCTAAAACAGCTTGGTTCTGCTTCTCCAATTGCTGTCTTTGAATGTCTGATGCAAGATGTAGCCCGTCCTAGATTAGTTCACCTGTGGATCGGTCAAAACTAGTATGGTTGCAGCATGTTTTGTGATGCGTTATGTTTCTTTTGTGCATGCCATCTTGCTGTTCAGGAGTGCATATATACAGTACTGCAATTCTATGTTACAGTGTATAGATGTCATGTTGGCATTTTTCAGCATCAGATGTGCCATTCTAGCTAGTTTTTGGATTTCAACATCTCAGACTTTCAAGTTCACGAGCGAAGGGGTTAATACTCTGTAGCTTTAAGTTAGTGTAGTGCAGCAGTAGTAGTAGCAGTAGTAGTACAGGGCTGGCCCTTTTCCAGAGCAGTTGGTCGCTGGCCCTGTTCATGCTGTCCTAGTGCTGTTTAAGGTTTTGATGAAGACATTGCTACAGCAGTTCTTGATGACTCATAGGTGGGGAATTCAAGTGGAACAAACAATTTTTTTTTTGTGGTCCTTCGTTTCAGAATGCAATCATGTTCTTCATGACCTCTGTAGCGGGAATGCATGGTAGTTTTATCCCAGCCTGCTGTCTGTATGACATGACTTATCTTAGGTCCCTAAGCGCTTTGCTAAGAACATGTTTCTAGAGTATTTTCGGCAAAAAGAATATGTAGGCATTGACATGTTTCTTTAACAACTCCATCTGGAAAATGATTTATCAAAGCAAACTAAATAGTGTTCTGGACAGTAGTGACAGTTCGTTCAGAACCAGACAAGAGGGAGACAACGTTTCTGTTCTTCAGTTGCTTCATGTTAACCGATCAGTGCAGCGTTGTAAATTGCAGTGTTAAAACTTGGGAGATTAATTAATTTAGGGCGTGCAGGATGATTGCTCCTCCATGAGCTTTCTTTTTTTTTTACCTGTGGGTGGGGGGATCTTTATACGGACGGAATAGGACTAAATACGGCCTGATGGACTGTTGCTTTTTTCTGTCTCTGCTTTTGCATGCGCACATGCATTGTGCACAGCACCAGATTCCCAGCAGTACACATCTCCAAACAGCTTCCGATCCGTTGGTTAATTCGTTTCAACTACACGCAAATTAAATACTGTACTCCAGTCTCCAGCTAAGTTATTGCTTCGCTTCACGTGATGTATTTTTCATCTCTTGCTTCTTGTTTTACGGTGTTGGTTTCCCTATTTGTTCTTGTCATCTCTGTCTGAAACTGCTGCTCCTGATCGACATGTACGTACAACGTGCTGCAGGTTCCACGAACTTCTGGAGTTCGACGACACCAAGCGCAGCTGCCGCCGGCGCTTGGCCGGTCACAACGAGCGCCGGAGGAAGAGCTCGGCGGACGCCAATGGTGGGGATGGCTGCCGCCACGTGGACCAGGACGGCCGGAGCAACCCGGGGAACCCGCCGCCGCTGAACCACTTCCAGATCAGATAAACCTACCTAAGCATGCTCCCTCTCTTCTGTCATGCAGCCATGCTACATCTATTTATGTATCTATATTGGCCTATCTATCCAGTGTACTACTAACTGGCAGTATGTATGATCCCCTGTGCTGCTATATATTTTGCACAGGAGGTATATGTGCTAATATCTGCCAAAAACCTAAGCTAATTGTAACCTGAAAATTAATCAGGTGTTAGAATGATTGTGCGTGCGTGTGAGGTTTGATGTGTAATTGTATGGCCTGCAGTGCCCAACTAAGACTTTAGCAGGCTGTGTAGTGTTGCTACTGTATTGGAATAATTGTGGCAATGTATGCTATTTATTCGAGTAATAAGTGCAGAAGATCAC
CDS Sequence
- >BRADI_1g26720v3
ATGGACCGGAAGGACAAGTCCCGGAAGTCCTCCTCCTCGGCGGCGTCCATGGCCGCGCTCGCCGCCGCCGGAGGAGACAGGATGGCGCCGCCTTCTTCCGGCGATGAGGACCAGAAGCCGAACCTGGTGAACGTGCCCGTGGTCGCCACCGGCGCCTCGAGCTCCTCTGCTGCCGCGGTGAGGAGGGGCGGCGGCGGCGGTGCTGCTGGTGGGCCCGTCGCGGTGGGCGGGGCCGGCGCGGGCGGGCCCAGCTGCCAGGCCGAGAGGTGCCCCGCCGACCTCACCGAGGCGAAGCGGTACCACCGGAGGCACAAGGTGTGCGAGGCGCACGCCAAGGCCGCCGTCGTGCTCGTCGCCGGCCTCCGCCAGCGCTTCTGCCAGCAATGCAGCCGGTTCCACGAACTTCTGGAGTTCGACGACACCAAGCGCAGCTGCCGCCGGCGCTTGGCCGGTCACAACGAGCGCCGGAGGAAGAGCTCGGCGGACGCCAATGGTGGGGATGGCTGCCGCCACGTGGACCAGGACGGCCGGAGCAACCCGGGGAACCCGCCGCCGCTGAACCACTTCCAGATCAGATAA
Protein Sequence
- >BRADI_1g26720v3
MDRKDKSRKSSSSAASMAALAAAGGDRMAPPSSGDEDQKPNLVNVPVVATGASSSSAAAVRRGGGGGAAGGPVAVGGAGAGGPSCQAERCPADLTEAKRYHRRHKVCEAHAKAAVVLVAGLRQRFCQQCSRFHELLEFDDTKRSCRRRLAGHNERRRKSSADANGGDGCRHVDQDGRSNPGNPPPLNHFQIR