Information report for Bra039324
Gene Details
Functional Annotation
- Controls flowering and is required for CO to promote flowering. It acts downstream of FT. Overexpression of (SOC1) AGL20 suppresses not only the late flowering of plants that have functional FRI and FLC alleles but also the delayed phase transitions during the vegetative stages of development. AGL20/SOC1 acts with AGL24 to promote flowering and inflorescence meristem identity.AGL20 upregulates expression of AGL24 in response to GA.;Suppressor of Overexpression of Constans 1;Encodes a MADS‐box protein
Homologous
- Brassica napus: GSBRNA2T00063263001, BnaC04G0606600ZS, GSBRNA2T00037309001, BnaA03G0221300ZS, GSBRNA2T00011646001
- Brassica oleracea: XP_013632160.1, XP_013632159.1, Bo4g195720, XP_013631375.1, XP_013631374.1, Bo4g024850, XP_013630326.1, Bo3g038880, XP_013630325.1
Gene Resources
- Pfam: PF01486 PF00319
- UniProt: A0A078HI84
- RefSeq: XP_013749655.1
- EMBL: HG994358 , LK032390
- AlphaFoldDB: A0A078HI84
- KEGG: bna:106452167
- OMA: RENLACP
- InterPro: IPR002100 , IPR002487 , IPR033896 , IPR036879 , IPR050142
- PANTHER: PTHR48019
- SUPFAM: SSF55455
- PROSITE: PS00350 , PS50066 , PS51297
- Gene3D: 3.40.1810.10
- OrthoDB: A0A078HI84
- SMR: A0A078HI84
- CDD: cd00265
- STRING: 3708.A0A078HI84
Sequences
gDNA Sequence
- >Bra039324
CACTTTCTTGAAGAAGAAGGCAACCCAATGAACAATTCTGTCTCTACTTCGGAACTTGGACTACTCTCTTCGTCACCTCTTCCACTTTCTTTGTTCTTGCTCGACCAAACTTTGATTTCATGAGATCCCCACTGCAATTAAAAAATAAGGGACATAATTATAAATATTTATTTGTCTACAAAATTAATAGATGCAAAGAAGCTCTAACAACACATAGAGGACCAAGGTCATGGCGATCATGGGACTACAATAATGCGAATGTAATTACTGAAGATATTAAAAATAAAGACTCCTAACCGAAAAGCCAAAATAAAGAACCAAACTTTTACTAAAAAATGACTCCTAACCAAAAAGCCAAAGTAAAGAACCAAACTTTTACTAAAAAAAACAAATGTGGAACCCTAACTTGAGACCCTTAGGATAAATTCGTTTATAGTATTGTACCTTTTCAGTGAGCTTCTGGTTTTCTGCAGCTAGAGCTTTCTCCTGCAAAGTTTTTAGTTCCATTTGTTAGAAGCAAACACAAGAAGATTACTAAGTTGTAATATTCCACCAGTTGAGTATCTTTACCTTTTGCTTGAGCTGCTCAATTTGTTCCTTAAACAGTTGAGTCTAATAGCAATGAGCAACTAAGTTAGAATTATGAATCATTTATAAGAATAATAATATGGGGATGATCTAAATAAATATGCATATATACCTTTCTTGCTCGAATGCATTTGACACTTTTCTCAAGTTGGGTCTCAATTTGCTGCAGCTCCTCAATCGAGCATGATCCTATGCCTTCTCCCAAGAGTTTACTAATAAAAGCAAGAATGAAAAATACTTAACACGCGTGTTTGACGTTTAACAACAGCAAAATTGCAAAGATACAAGTGTATGACATGTTTGTACCGTTTGGAAGCTTCAAGTTGTTCAATTTTCTTCATCATGTTTGCTGCTTCATGTTTCAAATGCTGTTGGTTATAACAATGTTATTGCATGTGATTGTTTTCAATGTGTCTAATAGTGACATTGAGACTTTATACAGACTATGATTATTTTTTCTTAAGCCATTTTGATCTTTGTACTTAAGTAGTTATATAAGAAACTGGTATACAAGATCATAATTAACCTGCATATTTTCTTCAGAAACCGGTTTGTTGCTGATTCGATCCTTGGTATGCGTCAGATAACGATCTATGGTATCTTGCATACTGTTAAAAACATAAACTCATCAGAGATTAAGTTAGCACAGTGTAAGAAACATATTTAATTCTCTGGAACTGGAACTCAAAAGCAGACAATTCAAGAGCATAAATTCTTTCTTACTCTAAGTAATCACAAGACTTAATGACATGACTTGGAAAAGCCTTGTCTATTTGGGGTTTTTTACCCCCAATTTTGGAAAATTAAAGACATGTGAGTCTCTTTTCTTTATATACTATTTAGTAGGTTGAGAGAAAGATGTACTTTCACAAATGGACAGATGGTCTGAAACATCTGATCAAAAGTAAATTTGGTTTCCCTTCTACTTAACACTACAAGATAGTTTCTCTCATTCTCTAAACAATCTATACTAAGATCGTGGCTTGAGTATGGATCCTAAATCAGGTAGAAAACAGTAGGAACATAGTAAGCAACTTAATTGCATTATATTAGGAATGATAATGAAATGAAGCATAGGTAATTTATCTATCAGGAACGATAAAACAATATGCTAATTCATCACTTAGATAAACCCTATTTGCTGTAAGTAATAACGAAAAATATTAATTTCGCCAGACTATGTATCATTTCAATTCATAAGGAAGCTAACTGCAACATAATTATGATCCTTAAATGAACCCAAGAAAGAATAATTGTAAACAAACTCAAGGAGTTGTACGTGTGTGTGATCATAATCTCTAACAAGAGATAATCAAATATATATATAACATGTCAAAAGTACTTGCAAGAGAGTTCTTTGGCATTTTAACTTTTATCATAACTCAAACTAAATATGACAGATAGAGAGAGAGAGACATCTCAAACAATTAAAACAAGACGGTGTACTTGATTTTACTTTAATAATAGCCTTAACATTGTAGAAACCAAGAACTCATTTAACACCCTCTCTAAGCAAACGTTTAAAGAGATGTAATTCCACAAAGAGCAAACAAATCAACAAAACCATGTATAAACCAAGACATACTGTAAACTTTCTATCTCTCTCTATTTCTCTCTCTGTAGAAGATTTATATGAAAACGTACTTGGAGCTGGCGAATTCATAAAGTTTTCCCTTAGGAGAGAAGATGATCAGAGAAACTTCCGCATCACAAAGCACTGAGAGCTCAAAGGCTTTCTTCAACAAACCATTCCTGCGTTTAGAGAAAGTCACTTGTCTGCTTGTTGCATTCTCTATCCTCTTCATCTGAGTTTTTCCCCTCACCAT
CDS Sequence
- >Bra039324
ATGGTGAGGGGAAAAACTCAGATGAAGAGGATAGAGAATGCAACAAGCAGACAAGTGACTTTCTCTAAACGCAGGAATGGTTTGTTGAAGAAAGCCTTTGAGCTCTCAGTGCTTTGTGATGCGGAAGTTTCTCTGATCATCTTCTCTCCTAAGGGAAAACTTTATGAATTCGCCAGCTCCAATATGCAAGATACCATAGATCGTTATCTGACGCATACCAAGGATCGAATCAGCAACAAACCGGTTTCTGAAGAAAATATGCAGCATTTGAAACATGAAGCAGCAAACATGATGAAGAAAATTGAACAACTTGAAGCTTCCAAACGTAAACTCTTGGGAGAAGGCATAGGATCATGCTCGATTGAGGAGCTGCAGCAAATTGAGACCCAACTTGAGAAAAGTGTCAAATGCATTCGAGCAAGAAAGACTCAACTGTTTAAGGAACAAATTGAGCAGCTCAAGCAAAAGGAGAAAGCTCTAGCTGCAGAAAACCAGAAGCTCACTGAAAAGTGGGGATCTCATGAAATCAAAGTTTGGTCGAGCAAGAACAAAGAAAGTGGAAGAGGTGACGAAGAGAGTAGTCCAAGTTCCGAAGTAGAGACAGAATTGTTCATTGGGTTGCCTTCTTCTTCAAGAAAGTGA
Protein Sequence
- >Bra039324
MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVSLIIFSPKGKLYEFASSNMQDTIDRYLTHTKDRISNKPVSEENMQHLKHEAANMMKKIEQLEASKRKLLGEGIGSCSIEELQQIETQLEKSVKCIRARKTQLFKEQIEQLKQKEKALAAENQKLTEKWGSHEIKVWSSKNKESGRGDEESSPSSEVETELFIGLPSSSRK