Information report for Bra038830
Gene Details
Functional Annotation
- encodes a member of F-box proteins that includes two other proteins in Arabidopsis (ZTL and FKF1). These proteins contain a unique structure containing a PAS domain at their N-terminus, an F-box motif, and 6 kelch repeats at their C-terminus. Overexpression results in arrhythmic phenotypes for a number of circadian clock outputs in both constant light and constant darkness, long hypocotyls under multiple fluences of both red and blue light, and a loss of photoperiodic control of flowering time. Although this the expression of this gene itself is not regulated by circadian clock, it physically interacts with Dof transcription factors that are transcriptionally regulated by circadian rhythm. LKP2 interacts with Di19, CO/COL family proteins.
Homologous
- Arabidopsis thaliana — AT2G18915
Gene Resources
- Pfam: PF12937 PF07646 PF13426
- UniProt: A0A075E6G9
- EMBL: KF286549
- OMA: GGCHISE
- InterPro: IPR000014 , IPR001810 , IPR015915 , IPR035965 , IPR036047
- PANTHER: PTHR46175 , PTHR46175:SF9
- SUPFAM: SSF117281 , SSF55785 , SSF81383
- PROSITE: PS50112
- Gene3D: 1.20.1280.50 , 2.120.10.80 , 3.30.450.20
- SMR: A0A075E6G9
- CDD: cd00130 , cd22154
- HOGENOM: CLU_033494_1_0_1
Sequences
gDNA Sequence
- >Bra038830
TGGAGTGGGACAGCGATTCCGATCTCAGCGACGGAGATGAGGTGGCTGAAGATGGATGGTTCGGCGGAGATAGCGGGCCGGTTCCGTTTCCGGAGATTAGTCTTCCTGGAACGACGCCGTGTGGGTTTGTAGTCAGCGACGCTCTAGAGCCAGACCAACCTATCATCTACGTCAACACCGTCTTCGAGATTGTCACTGGGTACCGCGCCGAGGAAGTTATTGGTAGAAACTGGTGAGCTTACTTACCCTTTTGTGCTGTTGATAAGATGTTGCTAGACAGAGCTTTGTGTTGATGGAAAAAATAGTAACTTTCGATTCGTTAATATGGTTCTTGTTGGTATGGATACTATAGAGGATCTTGAATGGTATTCGTAGCTAGAAAATTCGAAATCATGGAATTGGAAGTTGGTTATAGAGGAACAAAGCTATAAAGTGGAGAGCTTTGTCTTTCTGATTGTTGAACTGTGTTGTTAATTTGGTCTTTGTTCTATTGCTTGTGAGGGATCATTCCCTCAACTACTACTCTTAGCTGTTAAGTTGTTTGTTCCCTTCTGATTTGTTTCTTCTTCTTTTGGCAGCCGGTTCTTGCAGTGTAGAGGTCCATATGCTAAAAGAAGGCATCCCTCTGTAGATTCCACTGTTGTGTCAAAGATGCGACAATGTCTAGAAAAAGGCATCGAGTTTCAGGGCGAGTTGTTGAACTTCAGGAAAGATGGGTCTCCTCTGATGAACAAGCTGCGTCTTGTCCCCATCCGTGAAGACGACGAGATCACTCATTTCATAGGTGTTCTCTCCTTCACCGATGCTGATATCGATCTCAGCTCATTTCCTGACTTGTCTGCAAAAGAAATTCCAAGAAGATCTCGTTCATTTTCCTCTGCTTTACCAACCGGAGAGCGTAATGTTTCTCGTGGACTATGTGGGATATTCGAGCTGAGTGATGAGGTAATAGCTCTCAAGATACTGTCTCAGTTGGCTCCGTCCGATATTGCATCAGTGGGTTGTGTGTGCCGGCGGCTTAATGAGGTTACAAAGAACGATGATGTGTGGAGAATGGTTTGTCAAAACACGTGGGGGACCGAAGCTACACGTGTTCTCGAGAGTATTCCCGGTGAAAAGAGGATTGGATGGGTGCGATTGGCCCGAGAGTTTACCACACATGAAGCAAATGCGTGGAGGAAGTTTACGTTTGGTGGTACTGTTGAGCCTTCCCGGTGTAATTTCAGCGCATGTGCGGTTGGGAATAAGATTGTTATCTTTGGTGGTGAAGGTGTGAACATGCAACCGATGAATGATACATTTGTGTTGGATCTTGGCTCCACTAGTCCCCAGTGGAAATCAGTTCTGGTTAACTCTCCTCCTCCTGGTCGCTGGGGTCATACTCTTTCTTGTGTCGACGGATCCCATTTAGTAGTCTTTGGAGGTTACGGGAGCCATGGATTACTCAACGATGTCTTCTTATTAGACCTTGATGCAGACCCGCCTACATGGAGAGAAGTATCTGGTTTGGCCCCTCCAATACCAAGATCATGGCATAGCTCGTGCACACTCGATGGAACTAAGTTGATTGTATCTGGTGGTTGTGCTGATTCAGGTGCTCTGCTTAACGATACTTTTCTTCTTGACCTTTCGATGGATACACCAACTTGGAGGGAGATACCAGTTCCTTGGTCTCCTCCATCTCGCCTTGGACATACCTTGACCGTCTATGGTGACCGCAAGATCCTCATGTTTGGTGGTCTTGCGAAATTGGGAACTTTGAGATTCCGGTCTAACGATGTATTCACAATGGATCTTAGCAACGATGAACCATGCTGGAGACCGGTGATTGGTTATGGATCTAGCCTTCCGGGAGGCATGGCAGCTCCACCACCGAGGCTAGATCATGTGGCGGTTAGCCTTCCTGGTGGTAGAGTCTTGATATTTGGTGGTTCGGTTGCAGGGCTTGCCTCGGCGTCTCAGCTCTATCTTCTTGATCCTGCAGAGGATAATCCTGCATGGAGGATACTGAGTGTTAAGGGAAGTCCACCACGGTTTGCGTGGGGGCACACCACTTGTGTGATCGGAGGAACTAGGTTGGTCATCTTAGGTGGTCAAACCGGAGAAGAGTGGATGCTAAATGAAGCGCATGAATTGTTGTTAGCTACCTCTAGTACTACAATCAGCTCATCAAGACATGAAGAAAAGAGGATCTTCTAG
CDS Sequence
- >Bra038830
ATGGAGTGGGACAGCGATTCCGATCTCAGCGACGGAGATGAGGTGGCTGAAGATGGATGGTTCGGCGGAGATAGCGGGCCGGTTCCGTTTCCGGAGATTAGTCTTCCTGGAACGACGCCGTGTGGGTTTGTAGTCAGCGACGCTCTAGAGCCAGACCAACCTATCATCTACGTCAACACCGTCTTCGAGATTGTCACTGGGTACCGCGCCGAGGAAGTTATTGGTAGAAACTGCCGGTTCTTGCAGTGTAGAGGTCCATATGCTAAAAGAAGGCATCCCTCTGTAGATTCCACTGTTGTGTCAAAGATGCGACAATGTCTAGAAAAAGGCATCGAGTTTCAGGGCGAGTTGTTGAACTTCAGGAAAGATGGGTCTCCTCTGATGAACAAGCTGCGTCTTGTCCCCATCCGTGAAGACGACGAGATCACTCATTTCATAGGTGTTCTCTCCTTCACCGATGCTGATATCGATCTCAGCTCATTTCCTGACTTGTCTGCAAAAGAAATTCCAAGAAGATCTCGTTCATTTTCCTCTGCTTTACCAACCGGAGAGCGTAATGTTTCTCGTGGACTATGTGGGATATTCGAGCTGAGTGATGAGGTAATAGCTCTCAAGATACTGTCTCAGTTGGCTCCGTCCGATATTGCATCAGTGGGTTGTGTGTGCCGGCGGCTTAATGAGGTTACAAAGAACGATGATGTGTGGAGAATGGTTTGTCAAAACACGTGGGGGACCGAAGCTACACGTGTTCTCGAGAGTATTCCCGGTGAAAAGAGGATTGGATGGGTGCGATTGGCCCGAGAGTTTACCACACATGAAGCAAATGCGTGGAGGAAGTTTACGTTTGGTGGTACTGTTGAGCCTTCCCGGTGTAATTTCAGCGCATGTGCGGTTGGGAATAAGATTGTTATCTTTGGTGGTGAAGGTGTGAACATGCAACCGATGAATGATACATTTGTGTTGGATCTTGGCTCCACTAGTCCCCAGTGGAAATCAGTTCTGGTTAACTCTCCTCCTCCTGGTCGCTGGGGTCATACTCTTTCTTGTGTCGACGGATCCCATTTAGTAGTCTTTGGAGGTTACGGGAGCCATGGATTACTCAACGATGTCTTCTTATTAGACCTTGATGCAGACCCGCCTACATGGAGAGAAGTATCTGGTTTGGCCCCTCCAATACCAAGATCATGGCATAGCTCGTGCACACTCGATGGAACTAAGTTGATTGTATCTGGTGGTTGTGCTGATTCAGGTGCTCTGCTTAACGATACTTTTCTTCTTGACCTTTCGATGGATACACCAACTTGGAGGGAGATACCAGTTCCTTGGTCTCCTCCATCTCGCCTTGGACATACCTTGACCGTCTATGGTGACCGCAAGATCCTCATGTTTGGTGGTCTTGCGAAATTGGGAACTTTGAGATTCCGGTCTAACGATGTATTCACAATGGATCTTAGCAACGATGAACCATGCTGGAGACCGGTGATTGGTTATGGATCTAGCCTTCCGGGAGGCATGGCAGCTCCACCACCGAGGCTAGATCATGTGGCGGTTAGCCTTCCTGGTGGTAGAGTCTTGATATTTGGTGGTTCGGTTGCAGGGCTTGCCTCGGCGTCTCAGCTCTATCTTCTTGATCCTGCAGAGGATAATCCTGCATGGAGGATACTGAGTGTTAAGGGAAGTCCACCACGGTTTGCGTGGGGGCACACCACTTGTGTGATCGGAGGAACTAGGTTGGTCATCTTAGGTGGTCAAACCGGAGAAGAGTGGATGCTAAATGAAGCGCATGAATTGTTGTTAGCTACCTCTAGTACTACAATCAGCTCATCAAGACATGAAGAAAAGAGGATCTTCTAG
Protein Sequence
- >Bra038830
MEWDSDSDLSDGDEVAEDGWFGGDSGPVPFPEISLPGTTPCGFVVSDALEPDQPIIYVNTVFEIVTGYRAEEVIGRNCRFLQCRGPYAKRRHPSVDSTVVSKMRQCLEKGIEFQGELLNFRKDGSPLMNKLRLVPIREDDEITHFIGVLSFTDADIDLSSFPDLSAKEIPRRSRSFSSALPTGERNVSRGLCGIFELSDEVIALKILSQLAPSDIASVGCVCRRLNEVTKNDDVWRMVCQNTWGTEATRVLESIPGEKRIGWVRLAREFTTHEANAWRKFTFGGTVEPSRCNFSACAVGNKIVIFGGEGVNMQPMNDTFVLDLGSTSPQWKSVLVNSPPPGRWGHTLSCVDGSHLVVFGGYGSHGLLNDVFLLDLDADPPTWREVSGLAPPIPRSWHSSCTLDGTKLIVSGGCADSGALLNDTFLLDLSMDTPTWREIPVPWSPPSRLGHTLTVYGDRKILMFGGLAKLGTLRFRSNDVFTMDLSNDEPCWRPVIGYGSSLPGGMAAPPPRLDHVAVSLPGGRVLIFGGSVAGLASASQLYLLDPAEDNPAWRILSVKGSPPRFAWGHTTCVIGGTRLVILGGQTGEEWMLNEAHELLLATSSTTISSSRHEEKRIF