Information report for Bra038607
Gene Details
Functional Annotation
- RPD3-like histone deacetylase. HDA6 mutations specifically increase the expression of auxin-responsive transgenes, suggesting a role in transgene silencing.
Homologous
- Actinidia chinensis: CEY00_Acc26765, CEY00_Acc22022
- Brassica napus: BnaC03G0546700ZS, BnaA06G0283600ZS, BnaC09G0076100ZS
- Brassica oleracea: Bo3g104750, Bo9g017510
- Capsicum annuum: T459_32871
- Gossypium hirsutum: Gohir.D03G104300, Gohir.A03G061700
- Nicotiana attenuata: A4A49_27879
- Populus trichocarpa: POPTR_015G082500v3
- Solanum tuberosum: PGSC0003DMG400026989
- Vitis vinifera: VIT_17s0000g09070
Gene Resources
- Pfam: PF00850
Sequences
gDNA Sequence
- >Bra038607
CATTCCCATATCCAAGTGTTAGAACAGATAGCTAGCTTATCATCAAAAATCGGCTCACCGGGTTCAATGTTTCCTCCATAACCAAATCTCCATCTCTCTCTCTGAATCCTCAGCTTCCACACATCTTCCTCCCTTTCTTCCTCAACATACTCTTCAATTTTCCCTATGCATTTTGATCTTTGAAGCTCTTTCATCACTCTCCCTTCACTAAACAAATCCACAAGACTACCAGAGAACCCGGTTTTAACGCTAGTGTTCAAGGCATCCTCGGCGATGGCTGCTCTCAAATAATGGCTTTGTAGGAGAAAAAAGCAACTATAAAAGGAATGATTTTCTCTTGTTTTGATTGAATGGTAATGGAAATACAATCCTATTAAATACCTCTTGAGGCCAAAACAAAAAGGTTTCTTTGCAAACAAAAAAAAAAAAATCACATACGGAAGAAAAGCATCACCAAGAATCAATTCCCTAACTTTTGACACTACATCAAGCTGGTTTCAAGACGATGGTGGATCCACCTCCGGCTCTGCGCTATCATCTTCCATTTCATCTTCCCCTGTAGAGTCCCTGAAGAGATAAGAGATGTCTGTTAGAGGAAACAATAAGCATCAAAGATTTGGTAGACTGGTGAAGAAAGATGAAGCTTATTCTTTTCTTTTTTTTACCTGTCCATAGTTGCGCCATTAATACCTGAGAAACCACCAAGAGGTTTCTCATCATCGTCACTGTCTGATTCATAATTCGCAGTTCCACTCCAAATGCGAGGCTTTGGTCTCTTCTCCAAGTCTTCTTCCGGCTAAAGATTTGAGATAACAACAAAAATTCTAATGAGTCTGCTTCAATAGAACATGAAAGAAACTAAAACAGCAGAGAGAAGATATGGATGAACGGAAATTTACCTCATCTAAGACTCGATTAACTGGAGGTGTGTGCTGAAACGGCACACTAGGTGCGTGTATTAGTCCAGAAAGTTGTTCTAGCAATGTGTTCCTGAAATTTTCAACAAGTTTAACTTCCCCAAGTTCAAAATATAGGCTATGAGCATGTAAAGCTTCCGTGAACAATTGGAACCGGCACAACCATAAAAGGGGTAGAATGAGATCATCATACCTTATCCTCTCCATATCTTTTGGTGTGTTCAAATTCTCCATTGGGCCTGGCTCGACATGAAGCGTATAGTCTGGACCGAAATACTCAAAGTACTCATTGTACGGGCGCTTATTGCCCGGCTCTCCTCCAACCGCAACTGCAGTCTGCAACAGAGTCAACAGAAACCAAAACCTTTCAATAACAAAAACTTTACCAAAAAAGGCATACAACAAGTGCAAAAGATATGGAAAAAAAACCTCATAACACCAGCAACGAGCAACATTCCGAATAGTATACCCTCCACCACCCAAGACCATGAGAGGAACATTATAAGATCTCAAGAACCGGAGGCAATCAGCATGACCCTTGACTGACAAGTTGAAGCAACCCAGCCGATCACCGCTCAAGGAGTCAGCCCCACACTGAAGAACAACAGCTTCCGGACGATAAACCTCCATAACCTTCTGGATAAGAGGTCTAAACAAGCTGCGGAAACTCTCATCATCCATACCATCGTTCAACGGGACATTAAGAGCATAGTACTTCCCTTTCTCTGCGCCAACGTCTCTGATGTGACCAGTTCCTGGGAAGAAGTCCCCAAACTTGTGAAAAGAAACGGTCATAACTCTATCAGTGGTGTAAAACGCTTCCTCTACTCCATCTCCATGGTGAACATCGATATCAATGTAGAGAACCCGCTGCAAACGATGAAAGCATATTAACAGAATACAATAACATTAAACCCTAATTAAGATTCAAATCATCAGTCCCAAAAAGCTTCCACCTTTCAGGTAAATCTAGGAAAACTACTCCACAAGATAACATTAATTGAGATCAAGCATTTACCCTAAACAACTTAAGCAGCTCGATAATCCCTAAAACGATGTCGTTTACGTAGCATCAGTCTCAAAAAGCTTCAAGCTTTAAGGTAAACCAACAAAAACGACCCTACAAAGATAAAATTAAAACCCTAATTGAGATAAAGCATTTTACCCTAAACATCTTAAGCAACTCGAGAATCCCCAAAACGATGTCGTTTACGTAGCAAAACCCAGACGCCTCGCTCTTCTTAGCGTGGTGAAGCCCACCGCCCCAATTGATGGCGATATCCGCGTCCTGCCGGTTCAATTTAACGGCGGCGCCGATCGAACCTCCGGCGGAAGCGCGGCAAAACTCGAAAAGCCCGTCGAAGACAGGACAATCCTCGCCGACGTTGAATCGCCTCAGGTTACGCGCGGACGAGTCGCCGACGGACTCCGGCGAAACGGAGCGGAGGAAATCGACGTACTCGGGAGAGTGGAAGCGACCGATGTCGGCGGCGTCGGCGAGGTAAGGGCGGCTGATCTCGAGGCGGCGGTGGAGGTTGTAGTGGACGATAAGACTATGAGCCATACGGATCCGGTGAGGTTTCATGGGGTGGCCTTGACCGTAGTAGTAGTTACCGATCGTTGGCTCGTAGAAGTAGCTGACTCGTCGCTTACGACCGTCGGGTCCTGACGCTAAAGACACGCCGCTCTCGTCTGTCTCCAT
CDS Sequence
- >Bra038607
ATGGAGACAGACGAGAGCGGCGTGTCTTTAGCGTCAGGACCCGACGGTCGTAAGCGACGAGTCAGCTACTTCTACGAGCCAACGATCGGTAACTACTACTACGGTCAAGGCCACCCCATGAAACCTCACCGGATCCGTATGGCTCATAGTCTTATCGTCCACTACAACCTCCACCGCCGCCTCGAGATCAGCCGCCCTTACCTCGCCGACGCCGCCGACATCGGTCGCTTCCACTCTCCCGAGTACGTCGATTTCCTCCGCTCCGTTTCGCCGGAGTCCGTCGGCGACTCGTCCGCGCGTAACCTGAGGCGATTCAACGTCGGCGAGGATTGTCCTGTCTTCGACGGGCTTTTCGAGTTTTGCCGCGCTTCCGCCGGAGGTTCGATCGGCGCCGCCGTTAAATTGAACCGGCAGGACGCGGATATCGCCATCAATTGGGGCGGTGGGCTTCACCACGCTAAGAAGAGCGAGGCGTCTGGGTTTTGCTACGTAAACGACATCGTTTTGGGGATTCTCGAGTTGCTTAAGATGTTTAGGCGGGTTCTCTACATTGATATCGATGTTCACCATGGAGATGGAGTAGAGGAAGCGTTTTACACCACTGATAGAGTTATGACCGTTTCTTTTCACAAGTTTGGGGACTTCTTCCCAGGAACTGGTCACATCAGAGACGTTGGCGCAGAGAAAGGGAAGTACTATGCTCTTAATGTCCCGTTGAACGATGGTATGGATGATGAGAGTTTCCGCAGCTTGTTTAGACCTCTTATCCAGAAGGTTATGGAGGTTTATCGTCCGGAAGCTGTTGTTCTTCAGTGTGGGGCTGACTCCTTGAGCGGTGATCGGCTGGGTTGCTTCAACTTGTCAGTCAAGGGTCATGCTGATTGCCTCCGGTTCTTGAGATCTTATAATGTTCCTCTCATGGTCTTGGGTGGTGGAGGGTATACTATTCGGAATGTTGCTCGTTGCTGGTGTTATGAGACTGCAGTTGCGGTTGGAGGAGAGCCGGGCAATAAGCGCCCGTACAATGAGTACTTTGAGTATTTCGGTCCAGACTATACGCTTCATGTCGAGCCAGGCCCAATGGAGAATTTGAACACACCAAAAGATATGGAGAGGATAAGGAACACATTGCTAGAACAACTTTCTGGACTAATACACGCACCTAGTGTGCCGTTTCAGCACACACCTCCAGTTAATCGAGTCTTAGATGAGCCGGAAGAAGACTTGGAGAAGAGACCAAAGCCTCGCATTTGGAGTGGAACTGCGAATTATGAATCAGACAGTGACGATGATGAGAAACCTCTTGGTGGTTTCTCAGGTATTAATGGCGCAACTATGGACAGGGACTCTACAGGGGAAGATGAAATGGAAGATGATAGCGCAGAGCCGGAGAAACCTTTTTGTTTTGGCCTCAAGAGCCATTATTTGAGAGCAGCCATCGCCGAGGATGCCTTGAACACTAGCGTTAAAACCGGGTTCTCTGGTAGTCTTGTGGATTTGTTTAGTGAAGGGAGAGTGATGAAAGAGCTTCAAAGATCAAAATGCATAGGGAAAATTGAAGAGTATGTTGAGGAAGAAAGGGAGGAAGATGTGTGGAAGCTGAGGATTCAGAGAGAGAGATGGAGATTTGGTTATGGAGGAAACATTGAACCCGGTGAGCCGATTTTTGATGATAAGCTAGCTATCTGTTCTAACACTTGGATATGGGAATGA
Protein Sequence
- >Bra038607
METDESGVSLASGPDGRKRRVSYFYEPTIGNYYYGQGHPMKPHRIRMAHSLIVHYNLHRRLEISRPYLADAADIGRFHSPEYVDFLRSVSPESVGDSSARNLRRFNVGEDCPVFDGLFEFCRASAGGSIGAAVKLNRQDADIAINWGGGLHHAKKSEASGFCYVNDIVLGILELLKMFRRVLYIDIDVHHGDGVEEAFYTTDRVMTVSFHKFGDFFPGTGHIRDVGAEKGKYYALNVPLNDGMDDESFRSLFRPLIQKVMEVYRPEAVVLQCGADSLSGDRLGCFNLSVKGHADCLRFLRSYNVPLMVLGGGGYTIRNVARCWCYETAVAVGGEPGNKRPYNEYFEYFGPDYTLHVEPGPMENLNTPKDMERIRNTLLEQLSGLIHAPSVPFQHTPPVNRVLDEPEEDLEKRPKPRIWSGTANYESDSDDDEKPLGGFSGINGATMDRDSTGEDEMEDDSAEPEKPFCFGLKSHYLRAAIAEDALNTSVKTGFSGSLVDLFSEGRVMKELQRSKCIGKIEEYVEEEREEDVWKLRIQRERWRFGYGGNIEPGEPIFDDKLAICSNTWIWE