Information report for Bra038326
Gene Details
Functional Annotation
- Floral homeotic gene encoding a MADS domain protein homologous to SRF transcription factors. Specifies floral meristem and sepal identity. Required for the transcriptional activation of AGAMOUS. Interacts with LEAFY.Binds to promoter and regulates the expression of flowering time genes SVP, SOC1 and AGL24.;MADS-box transcription factor;MADS-box gene
Homologous
- Brassica napus: GSBRNA2T00048277001, BnaA02G0179200ZS, GSBRNA2T00118005001, GSBRNA2T00101980001, Bnascaffold0026G0050600ZS, BnaC06G0356400ZS, BnaA07G0272400ZS
- Brassica oleracea: XP_013589842.1, Bo6g095760, XP_013590290.1
- Raphanus raphanistrum: RrC12193_p1
Gene Resources
- Pfam: PF01486 PF00319
- UniProt: A0A078JJ53
- RefSeq: XP_013689628.1
- EMBL: HG994356 , LK034960
- AlphaFoldDB: A0A078JJ53
- KEGG: bna:106393475
- OMA: LMFESIA
- InterPro: IPR002100 , IPR002487 , IPR033896 , IPR036879 , IPR050142
- PANTHER: PTHR48019
- SUPFAM: SSF55455
- PROSITE: PS00350 , PS50066 , PS51297
- Gene3D: 3.40.1810.10
- OrthoDB: A0A078JJ53
- SMR: A0A078JJ53
- CDD: cd00265
- STRING: 3708.A0A078JJ53
Sequences
gDNA Sequence
- >Bra038326
CATGAGGCAAAGCAGCCAAGGTTACAGTTGTAAACGGGTTCAAGAGACAGATCAAGGTCGTTCCTCCTCATTGCCATTGAATCTTCTTCTTGATACAGGCCACTGCATTCACGTTCATATACACATGCATGATATAACTTATTAACTACTTAAGTGCACCGAAAATTATATGTTCCGTCCTCAAATTGGTAAAAGTCCAAATTGAAATACCAAAGAGTGTTCAGTAATCTGCCTAACTTATTTTCAAAAACAACAAGAAAATGGAACTGATGATCCCAACAGTTTCGTAGGCTTTCCACAGCCATTCCAAAATCTAAATATGTTAGTTCATCGACCATTGCATTAACCTACGTTAATGTATGAATAATCTTAGTGGAGTGTAGTCATAGTTCACAATTTAGACATCTAACCATCACCTATACACCTAGTTTCACTGGAACTATAACACCTTACTAGCTTGTATACAAGATATATATGTCTACTATATAAATACTTGGAAGTAAGAGCAAATTAGTAAAATTTAATTACCCCATATTGAGAAAAGGAGATGGCTGATGAGAGAGCATGTATGGATGCTGGATTTGATGCTGCTGCGGGGGAGGAGGAGGAGGCACATTGTGGCCATGGTTTTGCTGGTCCCATTGCTCTTGTTGTGCCCGAAGAATCTTTTCCCTTTCCTTGATCTGACAAGTTCCAATTTCACACACCAATTTGTTATCAACTTATTCCATACCATATTATAATCTACATCGTTTCTCAAAGCGTCGACTTCATAAATACTTAGATATGTGGCATCCAATGTAATTGCATTTAGATCTACGGTTACTACTAATTCCTTTCATAAACTATTGTACATGTGTTAAATAAATATCTTCACACACTGTTTTTACTTGCTTCCAAATTTTAGCCCAATATTTTTAATTAGGAGTAGTGTCTATATTCACATACTTAATATACAGATGAACAGATCTAGTAGAGGTAGTTGAGACGACGTTTTGAAGTTCAAATATTTTCAATCCGAGAGACAACTCTAAAACTACACGGACAAAGACAATCTACGTACCGGCTGATGATGATTATATAAAAAATGCAAATATCTTCAATCTACGTTTTAATTATGATGACCAGAACCTAAGCGGGGATGTGAAGATCTAATCTCGTAGATAGTTATAGACTTATAGCTTGGCTTGAAATGCGGAGTAGAACAGTGAAAGCAAGCAGTAGTGCGATGGAAAACATCTTCACATAATATAATTATAAAAAACAAGTGTCACCTCTTTGGAAAGCATGCTGTTTTGCTCATGTATGGCCTTCTCCTGTCATTTACAAACGGCAAGATTGTTAGCTCTCATATATCTCCACTTCTTACACGATGTTACTTCATGTAGACATACGTTTAATAGGGTTCTTACATACCTTTCTTTGGAGCTCATTGATGGAGTCGTACATAAGTTGGTTCTGCAAAGACACACATCACATGATCTTAATTATACACAAATTCTTTTAAACTTCATACATTTGAATCGACTATATATTTTTAATATCCAACCATGCAGTACGACATGCATACAAATTTACATACATATGTATTCGAATAAGTAAATAATAAGATCGTATATATATGTTAAATATATGTTAAAGAAATAGGAGGATTCATACCTTTCTAGAGCGGATGTGCTTAAGAGCTGTGTCAAGCTGCTGCTCCAGATTCTGGAGCTCCTTAGAGCTCATCGCTTGCAAGTCTTCCCCAAGATAGTGTCTGCATTTCAATAGCGTCCAGGCATCATGTTCTCGTTAAGTAAATGTATCCATGTGCATTTTAACATTAATGCTACCCGGTTTCCTATTTCATTTGTCCATATATATATATGCATGATCAATGTAAGTGTATACCTCTGGTTTCTCTCCAAAAGGTCAATCTTAGCCTTAAGCCTGTTATACTCCATCGACCAGTTCGTCTGTATGTCAAAAGTTTAACAATAGAGATATACTTCAGCAAATATTGAAATACGTAGTTACATAATGTATGTAAGGTAATGGAGTTATATTGATTTACATTGACGTCGGACTCAGGTGCAATAAGCTGTCTCTCTGCGTAAGAGTATCTCTCATAGCGTTCAAGTATCTTCTCCATACTGTTCAACTCGCAGAATTAGGGCTAGCTTCATGTCTTAAACCATTTATTGTCGTATATTTTATATGTATATATGCATATTTGTCTATGTAAATAAGCAAATCATCATGTAATAGCCAAACTTAGGATATTCTCAGGTTTTCATGACATTTTAGGTAATTCTAGTTAGGTCTTAATGATGGTTTCTATGCCTTAAACCCAATATTTGCTAAATCACGTAGTTCTGTACAGATCTCTATAATTCTTCTTTTAACAAAACAGCGAATCAATAACTCTATACATCTAGCTTAGGGTTCTGAGTGCGGTTTATTTAAAATGGTTACAAATATGTACAGGAAATCTTGTTATAAATGACAGATACACATTATAATAAAATATTGTAATCTGGTCAAATCACTAATCTACCGATGTTATTTGGAATATAATAGGGATAACATTTTTAAATGGAAGAAGAACAGCTGGAGCTAAGTCTGACCATTGGTAAGAAGCCGAACATAGGATTAAGTTTATTGATTTCGTGGATCCCCAGAGGTCCAAGACCCCCTACTCAGATTTAACATCCTTATTTCCAGCGTTTCAATTGGTAAAAAATCTAATAAACCAGAAGCAGCTGTACGTTTGAAATTGAAATTAATCCTTTTATATTACCAGCTTCCCATCACATATTTTAGCTAATCCACTTTAATAATAGTCCATTTGCGAGATCATTGAAAGAAAATCAACATTACATTTAATAATTGAGCTCATGTTCCTAGCTACGAGCCGATTTAAATTAAACATTTTCTTTCTTACTTTGGCATTAATTCAAAATTAGATATTGCGTAATTTTGAAAGACACAGCCAGGAGAACAAAACAATGCATACAGATTTTAGGGCTTAAACCCCTAGCCAAGAAATTAAGCATTTATATTCTATATGAAATAGTGCATACACAATGACACACACACACACATATGTGTGTGTATATATATCCAGATCAATAGTATAGTTAGTGCTCTAGGGTTAGATTCACTCCAGGCCCTATAGTTTTGGTTTTTAATTCATAAAAATCAAAGTATCAAACATTTTTCTGGTAGTAATTAACAGATTCAGTAAAGACATCTAACTAGTAATAATACAAAGCAAATGAAAGCCCTAAAAGATGCCTAAATCAGAACAGTATTACTAACTAGGGTAAATCAAGTTGTCAACTTAAGAGAAAAACAAGAGTCAAAACGATAAATTAAAGATATTTTTGGATCTTAAATGAGAAAGTTACCAAGAATCAGTGGAGTATTCAAAGAGTTTCCCCTTATGGGAGAAGACAACAAGGGCAACTTCAGCATCACATAGAACAGAGATCTCGTGAGCTTTCTTCAGAAGACCAGCTCTTCTTTTCGAGAATGTCACTTGTCTATTGATCTTATTCTCTATCCTCTTCAATTGAACCCTACCCCTTCCCAT
CDS Sequence
- >Bra038326
ATGGGAAGGGGTAGGGTTCAATTGAAGAGGATAGAGAATAAGATCAATAGACAAGTGACATTCTCGAAAAGAAGAGCTGGTCTTCTGAAGAAAGCTCACGAGATCTCTGTTCTATGTGATGCTGAAGTTGCCCTTGTTGTCTTCTCCCATAAGGGGAAACTCTTTGAATACTCCACTGATTCTTGTATGGAGAAGATACTTGAACGCTATGAGAGATACTCTTACGCAGAGAGACAGCTTATTGCACCTGAGTCCGACGTCAATACGAACTGGTCGATGGAGTATAACAGGCTTAAGGCTAAGATTGACCTTTTGGAGAGAAACCAGAGACACTATCTTGGGGAAGACTTGCAAGCGATGAGCTCTAAGGAGCTCCAGAATCTGGAGCAGCAGCTTGACACAGCTCTTAAGCACATCCGCTCTAGAAAGAACCAACTTATGTACGACTCCATCAATGAGCTCCAAAGAAAGGAGAAGGCCATACATGAGCAAAACAGCATGCTTTCCAAAGAGATCAAGGAAAGGGAAAAGATTCTTCGGGCACAACAAGAGCAATGGGACCAGCAAAACCATGGCCACAATGTGCCTCCTCCTCCTCCCCCGCAGCAGCATCAAATCCAGCATCCATACATGCTCTCTCATCAGCCATCTCCTTTTCTCAATATGGGTGGCCTGTATCAAGAAGAAGATTCAATGGCAATGAGGAGGAACGACCTTGATCTGTCTCTTGAACCCGTTTACAACTGTAACCTTGGCTGCTTTGCCTCATGA
Protein Sequence
- >Bra038326
MGRGRVQLKRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVALVVFSHKGKLFEYSTDSCMEKILERYERYSYAERQLIAPESDVNTNWSMEYNRLKAKIDLLERNQRHYLGEDLQAMSSKELQNLEQQLDTALKHIRSRKNQLMYDSINELQRKEKAIHEQNSMLSKEIKEREKILRAQQEQWDQQNHGHNVPPPPPPQQHQIQHPYMLSHQPSPFLNMGGLYQEEDSMAMRRNDLDLSLEPVYNCNLGCFAS