Information report for Bra035933
Gene Details
Functional Annotation
- Pseudo response regulator involved in the generation of circadian rhythms. TOC1 appears to shorten the period of circumnutation speed. TOC1 contributes to the plant fitness (carbon fixation, biomass) by influencing the circadian clock period. PRR3 may increase the stability of TOC1 by preventing interactions between TOC1 and the F-box protein ZTL. Expression of TOC1 is correlated with rhythmic changes in chromatin organization.
Homologous
- Brassica napus: BnaC09G0066100ZS, BnaA03G0408400ZS, BnaC07G0381000ZS
- Brassica oleracea: Bo9g014570, Bo7g098570
- Glycine max: Glyma.05G025000, Glyma.17G102200, Glyma.04G166300, Glyma.06G196200
- Gossypium hirsutum: Gohir.D03G094200
- Juglans regia: Jr02_06070
- Manihot esculenta: MANES_14G081500, MANES_06G089800
- Populus trichocarpa: POPTR_015G061900v3
Sequences
gDNA Sequence
- >Bra035933
TGGATTTGAACGGTGAGTGTAAGGGAGGAGATGGGTTTATTGACAGAAGCAGAGTTAGGATTTTGCTTTGTGACAATGATTCCAAGAGCCTGGGAGATGTTTTCACCCTCCTTTCACAGTGTTCTTATCAAGGTATGCTTTACAACTGATGGTTTTTACTTTGCTATTTGCCATGAAAGTTGGAAGTTCTACTTTAGATTGCAGATCATGGACCTCTATTGATTTGAGTTTTTGTTAGTAGTCAAGGATTAGATTTGGTGTATACTCTAGTTATGAATGGGATGGTTCAAGTATTTTCTTACAATCTGTTCCAGTTAGGTTACTTGTAGAGTCTTTCCCTTGTTCTTGTGCTGTGCAAAGTTTTTAATCAGTTGGTTCCTTGATCACATGTGTTTTAAAAAGAGATTATTTAAGTGACCTCTTTTGTTGATTTTAGTATCATTTTTGTAGTTTTTAAATGCATATGTAGTGTCTATTGCATTCTTTTTTCTTTTTTCTTTTTATTACTTTTTGTACAATGAATATTGTGAATGGATGTTTTTCTTGAAACGCAGTGACTTCAGTGAAATCAGCAAGGCAGGTGATTGATGCACTAAACGCAGAGGGACCTGATATCGATATAATACTTGCGGAAATTGATCTCCCCATGGCCAAGGGTATGAAGATGCTGAGGTACATCACACGTGACAAAGATCTTCGGAGAATCCCTGTCATAAGTAAGCTTTGTACTTTATCTGCTTAAAGCTTGTTTTGACAGCATGATCATTTCCTTAGATTCTAACGAATCTTATTATAATATGCTAAGTGATGTCGAGGCAAGACGAGGTACCTGTTGTGGTGAAGTGCTTGAAGCTAGGTGCAGCTGACTACCTTGTCAAGCCTCTTCGCACCAACGAGCTTCTCAACTTGTGGACATACATGTGGAGAAGAAGACGCATGGTTTGTTTTGCTCCTTACTTCTTAATCTCTGTTACTATACTTTAAGTTAAACTACCTTTGTGTTTTGTTTTTGCAGCTAGGACTTGCTGAGAAGAATATGTTGAGCTATGATTTTGATCTTGTGGGATCTGATCCAAGTGATCCAAACACAAACAGTACCAACCTCTTCTCTGATGACACTGATGACAGAAGTATCAGGTCCACCAACCCGCTGAGAGGACCTTTAAGCCGTCAGGAAAAAGAGGTGAGAAAAGTATTATGAAAGTCTTACAAGTCCTCTAAAAATAGCAAAGAGCTAATTTCTCATGCTTTTGCTGTTAGTGTCCTGCTGCTACTGGTTCTGTTGATGGCACAGCCACTTCAGCTCCTCCTCCATTAAATCATCTTCCTGGGTCTCATCATGAGCCTAATCCAGGTGATTGTTTCGCTTTGATTTAGCACTTTCTAATAGCTTTGTTGCTGTGAATGCTAATATAGTTACCGTTTCTGCAGAGAAATTTTCTTCAGTGCCAAAGAAGAGTAGATTGAAGATTGGAGAGTCCTCAGCTTTCTTCACATATGTCAAGTCTACCGCCCTGGCTACCAACTGTCAAGATCCTCCCCATGTCAATGGAAACGGCTCACTTCATCTTCACCCAGGTGTGGTTGCGGAGAAGCTTCAAGTGGTGGCCAGTGAGGTGATCAACAAGCCCAAGCAAACACACCGAAGCAGAGAGACTGAGAAAAACTTACAGAATGGCGGCGCCACGGAAGAACTTCATGGTAGGAGTTACCAAGAGAGGAATCAGGTTGCTGTGAACAGAAGTAAGGATTCATCTCAAGTTGCCTATCCTTACTATATGCAAGGGGTCATGAACCAAGTTATGATGCAATCAGCAGCCATGATGCCTCAGTATGGTCATCATCAACATCCTCATTACCCACCTAATCATCTCAATGGAATGACAGGAGTTCCTTATTACCACCACCATCCCATGAACACACCCTTACAGCACAATCAAATGTCACAGAATGGTCAGATGTCTATGGTTCATTATCATCCGTCATCTAACGAGGTGAGAGCGAGTAAACTTGACAGAAGAGAGGAAGCTTTGCTTAAATTTAGACGTAAGAGGAACCAAAGGTGTTTTGATAAGAAGATTAGGTATGTGAATAGGAAGAAGCTCGCTGAGAGGAGGCCGCGTGTTAAGGGTCAGTTTGTTAGGAAAATGAACGGGGTGAATGTTGACTTAAATGGGCAGCCTGACTATGATGACGAGGAAGAGGAGGAGGATGAAGAGGAAGAGGAGAATAGGGACTCATCTCCTCAGGATGATGCTCAGGGAACTTGA
CDS Sequence
- >Bra035933
ATGGATTTGAACGGTGAGTGTAAGGGAGGAGATGGGTTTATTGACAGAAGCAGAGTTAGGATTTTGCTTTGTGACAATGATTCCAAGAGCCTGGGAGATGTTTTCACCCTCCTTTCACAGTGTTCTTATCAAGTGACTTCAGTGAAATCAGCAAGGCAGGTGATTGATGCACTAAACGCAGAGGGACCTGATATCGATATAATACTTGCGGAAATTGATCTCCCCATGGCCAAGGGTATGAAGATGCTGAGGTACATCACACGTGACAAAGATCTTCGGAGAATCCCTGTCATAATGATGTCGAGGCAAGACGAGGTACCTGTTGTGGTGAAGTGCTTGAAGCTAGGTGCAGCTGACTACCTTGTCAAGCCTCTTCGCACCAACGAGCTTCTCAACTTGTGGACATACATGTGGAGAAGAAGACGCATGCTAGGACTTGCTGAGAAGAATATGTTGAGCTATGATTTTGATCTTGTGGGATCTGATCCAAGTGATCCAAACACAAACAGTACCAACCTCTTCTCTGATGACACTGATGACAGAAGTATCAGGTCCACCAACCCGCTGAGAGGACCTTTAAGCCGTCAGGAAAAAGAGTGTCCTGCTGCTACTGGTTCTGTTGATGGCACAGCCACTTCAGCTCCTCCTCCATTAAATCATCTTCCTGGGTCTCATCATGAGCCTAATCCAGAGAAATTTTCTTCAGTGCCAAAGAAGAGTAGATTGAAGATTGGAGAGTCCTCAGCTTTCTTCACATATGTCAAGTCTACCGCCCTGGCTACCAACTGTCAAGATCCTCCCCATGTCAATGGAAACGGCTCACTTCATCTTCACCCAGGTGTGGTTGCGGAGAAGCTTCAAGTGGTGGCCAGTGAGGTGATCAACAAGCCCAAGCAAACACACCGAAGCAGAGAGACTGAGAAAAACTTACAGAATGGCGGCGCCACGGAAGAACTTCATGGTAGGAGTTACCAAGAGAGGAATCAGGTTGCTGTGAACAGAAGTAAGGATTCATCTCAAGTTGCCTATCCTTACTATATGCAAGGGGTCATGAACCAAGTTATGATGCAATCAGCAGCCATGATGCCTCAGTATGGTCATCATCAACATCCTCATTACCCACCTAATCATCTCAATGGAATGACAGGAGTTCCTTATTACCACCACCATCCCATGAACACACCCTTACAGCACAATCAAATGTCACAGAATGGTCAGATGTCTATGGTTCATTATCATCCGTCATCTAACGAGGTGAGAGCGAGTAAACTTGACAGAAGAGAGGAAGCTTTGCTTAAATTTAGACGTAAGAGGAACCAAAGGTGTTTTGATAAGAAGATTAGGTATGTGAATAGGAAGAAGCTCGCTGAGAGGAGGCCGCGTGTTAAGGGTCAGTTTGTTAGGAAAATGAACGGGGTGAATGTTGACTTAAATGGGCAGCCTGACTATGATGACGAGGAAGAGGAGGAGGATGAAGAGGAAGAGGAGAATAGGGACTCATCTCCTCAGGATGATGCTCAGGGAACTTGA
Protein Sequence
- >Bra035933
MDLNGECKGGDGFIDRSRVRILLCDNDSKSLGDVFTLLSQCSYQVTSVKSARQVIDALNAEGPDIDIILAEIDLPMAKGMKMLRYITRDKDLRRIPVIMMSRQDEVPVVVKCLKLGAADYLVKPLRTNELLNLWTYMWRRRRMLGLAEKNMLSYDFDLVGSDPSDPNTNSTNLFSDDTDDRSIRSTNPLRGPLSRQEKECPAATGSVDGTATSAPPPLNHLPGSHHEPNPEKFSSVPKKSRLKIGESSAFFTYVKSTALATNCQDPPHVNGNGSLHLHPGVVAEKLQVVASEVINKPKQTHRSRETEKNLQNGGATEELHGRSYQERNQVAVNRSKDSSQVAYPYYMQGVMNQVMMQSAAMMPQYGHHQHPHYPPNHLNGMTGVPYYHHHPMNTPLQHNQMSQNGQMSMVHYHPSSNEVRASKLDRREEALLKFRRKRNQRCFDKKIRYVNRKKLAERRPRVKGQFVRKMNGVNVDLNGQPDYDDEEEEEDEEEEENRDSSPQDDAQGT