Information report for Bra030496
Gene Details
Functional Annotation
- LHY encodes a myb-related putative transcription factor involved in circadian rhythm along with another myb transcription factor CCA1;late elongated hypocotyl and circadian clock associated-1-like protein 1, LATE ELONGATED HYPOCOTYL 1 gene a
Homologous
- Brassica napus: GSBRNA2T00034511001, Bnascaffold0415G0000300ZS, BnaA07G0053300ZS, BnaC03G0001300ZS, GSBRNA2T00134120001, GSBRNA2T00085393001, BnaC05G0010100ZS
- Brassica oleracea: XP_013630031.1, Bo3g001090, XP_013630032.1, XP_013630033.1, XP_013630035.1, XP_013587353.1, XP_013587352.1, XP_013587351.1, XP_013587350.1, Bo5g002760
Gene Resources
- Pfam: PF00249
Sequences
gDNA Sequence
- >Bra030496
TATGTTGAAGCTTCTGCTTCCAGACGAAGCCTCTTGCAGCAGACCTTTTCATCATTGTGATTGTTTGCGTTTCCAACTTGGCTCTCTTTCGCTTCCATGGAACATCTCTTGTATGGCTTAAACCCCGTCTCTCTCATTTTAAGACTCTTCCCCGGTTCTTCATCCACTGCGCTTTCTTGGTCTGCATTACAAGAATCTTGAATCTTGTTCAAGTTATTATGAGCCAATGGCATTGACGTGTCGCTAATTTGTTTTCCATTCACATTCTCTTCCACTTGAGGAGGTGAAAAGCTTTGTGGCAACCTCTCTCTTGCAAAGAGAGCCTGAAATGCTATACGACCCTGAGACCAGAGTTTCACGTTTAGTGTTAGTTCCAAAGCAAAACTCTGCAAGTGAATGAATCATTGTTTTTACCCCTTGAGAGACTTCCTTCCATGAATCAGTAGTTTGGTTGTTGTTGTTGTCTCTGATTTTACTCCGACGGTTGCCTAACTCAATAACACTTGGCTGGTTTGCATCTGCCTCTTTTTCTTTCTCCAATGCGTCTGTTTCCACGTCACTGCCTGAAGGTGTGTTTGACCCACACGATGAGCGGTCCACTGGATTTTTCTTGTGGGAAACGTTTGAATCTTGCAAAGCAGCAACAACTTCCTCCTTGTCACCGTCAGCCTTTATCTTGGTAATTCCAGTCTCGTCTGAATCGTCGGATGATGAATCTGGAGATTTTGAAGCCATGTTTTGTTCTTGAAAGGCCGTGCTTTGTTTCTCAAGGTGATCATTTCCGACGTTGTCCATAGCTGCTGGAGTTGGAACTGGGACGGCTGGTAATGGGACTGGAGTAGGAAGAAGTCCATGAGAAGCCCACCAAGCAGTTGCGGCAGCTACTGTAGCAGCAACGATGGCAGCTATAGTTGGAGGAGAAGAGCTCATTTGCGTTGATGAGTCTCCGGCATTAGTAGTAAAGGGCCAGGCCGAAGCAGCGAATGTGGCTGCAGCATGAGCAGCAGGATTCTGTAGGAGTGTAGACATGATAAGATTGGAGAAAGTAGAAGACATGTGGAGAAACGAGCGGTAATCATGCTGGAAAGGGAATGCTGGAAACGCTTGATGGGAAGTTGTAGTAGTAGCAGCAGATGGTGAAGTTGTAGTAGCTGGATGATGCCTTGCGCTGTGCAGACCACCATCATCATCATCATCATCATCATCATCTCTGTCTTTGTTCTTCTCATGAACCACGTTGTTGTCCACATTTGAAGCCTTGCTTGTTTCATTATCGGCACTTGCCTGCTCAAAATAATCAGAATCGAACCAAGTTTTTCTTTTATTGCTATTGAGGAACTTCAAAATACAGCATCATGTTCTTGGACTACAATCTTTATACCTTTCTTAGCGACGGATCAGAAGATTCCATGAATGTCTTTCGTTTCCCTGGAGTTACTACTTTATTTGGTAAGGGATACTTGTTCACCCCTGAGCAGTTCTCTTCTTGATTTTCTTTCCCAGTTGATATTTTCTAAACCAGAAACAAAAGCATAACAAGTCTGTCACAAGAAAAAGAAACAACAACAAAATGATAGAATGAAGAACATAAAAAACCTCAGGAAGGGGCACCTTTTCCAAATCCAAGAAGGCCTGCTGGTTACATTCTGAAGAAGATACAAGCTGTTTCGCTTGCGACGAAGATGGACCAGGTTTCCGAGGATAAGGAGCATTGGGTTTTCTTTTAGGACGAGGAGGTGGAATCTCTATGTCCAGAGCTTTAATGCCTTTAGCTTCAGCCTCTTTCTCCAACTGAAGAGTCCAACCACAACTGTGAGTTCCTTTTTTTTTGTTTTTTTCCAAATCGGAGATTGTAAATGCAACCCTGAGACTCTTGAGCTTGATGTTAAAAAAAAAAGAGTCTTATACTGACCCGAAAGTGTTCGTGGTGGGTAGAGGAGACACTTACTTCATGTCCTTGTCCTATACGGGCCAAGGAGGTTTTGTTTTGCTATTTGAATGGCTAAAAGAGTCCATGCAATCTCATTATTTCATGGAGTTTGGTGAATATGGGACAAAAGTGTGTCATGCAAAATGCAATGCTAGTTATGTTACTGTAGACTTGTCTCAGATAATGAATGGATCTCTCTCTCTCTCTCTTTGATCTAATTGTAAAATATCAAAACCAATAATTTCTACAAGCTCTACTTAGCAAAATAAAACAACACACAAGTGACAGGTAAGTGATAGGCAATCTCTAAACATAGTCATTTGACTAAATTCATGGGATCTATCAATATATTGACCAACAGAACCGAACAGCTTACCTTTGTGAAGAACTTTTGTGCATGGCTTCTGATCTGAACAGCAGTCTTTGTCCCAATATTTTCTGTACAAAAAAAAAAAAACAAGGAAAATGAACAGAGAAGACTGATGTTCAGATCATACAGCAAGAAGCTAATAATGTATTGGGACCTTGGATACGTTGCCAAGCTCGTCCATAAAGCCTCAAGGCTTCAAGAAACCTATCATGCTCGTCCTCAGTCCATCGTTCTCGCTGCTTCGTTATTGTATATGGCTTTCTTGCCTATTCATTCAACAAAACCAAATATTCGTTCACGTCACACTAAACAAAGAAGAATCCCAAAAAAATATCTCAAACTAGGACAATCTTTTGCATTTTATTACCTTAGTTAACAATTCTTCACCAGGTCCATCAGATGTATTTGTATCCAT
CDS Sequence
- >Bra030496
ATGGATACAAATACATCTGATGGACCTGGTGAAGAATTGTTAACTAAGGCAAGAAAGCCATATACAATAACGAAGCAGCGAGAACGATGGACTGAGGACGAGCATGATAGGTTTCTTGAAGCCTTGAGGCTTTATGGACGAGCTTGGCAACGTATCCAAGAAAATATTGGGACAAAGACTGCTGTTCAGATCAGAAGCCATGCACAAAAGTTCTTCACAAAGTTGGAGAAAGAGGCTGAAGCTAAAGGCATTAAAGCTCTGGACATAGAGATTCCACCTCCTCGTCCTAAAAGAAAACCCAATGCTCCTTATCCTCGGAAACCTGGTCCATCTTCGTCGCAAGCGAAACAGCTTGTATCTTCTTCAGAATGTAACCAGCAGGCCTTCTTGGATTTGGAAAAGGTGCCCCTTCCTGAGAAAATATCAACTGGGAAAGAAAATCAAGAAGAGAACTGCTCAGGGGTGAACAAGTATCCCTTACCAAATAAAGTAGTAACTCCAGGGAAACGAAAGACATTCATGGAATCTTCTGATCCGTCGCTAAGAAAGGCAAGTGCCGATAATGAAACAAGCAAGGCTTCAAATGTGGACAACAACGTGGTTCATGAGAAGAACAAAGACAGAGATGATGATGATGATGATGATGATGATGGTGGTCTGCACAGCGCAAGGCATCATCCAGCTACTACAACTTCACCATCTGCTGCTACTACTACAACTTCCCATCAAGCGTTTCCAGCATTCCCTTTCCAGCATGATTACCGCTCGTTTCTCCACATGTCTTCTACTTTCTCCAATCTTATCATGTCTACACTCCTACAGAATCCTGCTGCTCATGCTGCAGCCACATTCGCTGCTTCGGCCTGGCCCTTTACTACTAATGCCGGAGACTCATCAACGCAAATGAGCTCTTCTCCTCCAACTATAGCTGCCATCGTTGCTGCTACAGTAGCTGCCGCAACTGCTTGGTGGGCTTCTCATGGACTTCTTCCTACTCCAGTCCCATTACCAGCCGTCCCAGTTCCAACTCCAGCAGCTATGGACAACGTCGGAAATGATCACCTTGAGAAACAAAGCACGGCCTTTCAAGAACAAAACATGGCTTCAAAATCTCCAGATTCATCATCCGACGATTCAGACGAGACTGGAATTACCAAGATAAAGGCTGACGGTGACAAGGAGGAAGTTGTTGCTGCTTTGCAAGATTCAAACGTTTCCCACAAGAAAAATCCAGTGGACCGCTCATCGTGTGGGTCAAACACACCTTCAGGCAGTGACGTGGAAACAGACGCATTGGAGAAAGAAAAAGAGGCAGATGCAAACCAGCCAAGTGTTATTGAGTTAGGCAACCGTCGGAGTAAAATCAGAGACAACAACAACAACCAAACTACTGATTCATGGAAGGAAGTCTCTCAAGGGGGTCGTATAGCATTTCAGGCTCTCTTTGCAAGAGAGAGGTTGCCACAAAGCTTTTCACCTCCTCAAGTGGAAGAGAATGTGAATGGAAAACAAATTAGCGACACGTCAATGCCATTGGCTCATAATAACTTGAACAAGATTCAAGATTCTTGTAATGCAGACCAAGAAAGCGCAGTGGATGAAGAACCGGGGAAGAGTCTTAAAATGAGAGAGACGGGGTTTAAGCCATACAAGAGATGTTCCATGGAAGCGAAAGAGAGCCAAGTTGGAAACGCAAACAATCACAATGATGAAAAGGTCTGCTGCAAGAGGCTTCGTCTGGAAGCAGAAGCTTCAACATAA
Protein Sequence
- >Bra030496
MDTNTSDGPGEELLTKARKPYTITKQRERWTEDEHDRFLEALRLYGRAWQRIQENIGTKTAVQIRSHAQKFFTKLEKEAEAKGIKALDIEIPPPRPKRKPNAPYPRKPGPSSSQAKQLVSSSECNQQAFLDLEKVPLPEKISTGKENQEENCSGVNKYPLPNKVVTPGKRKTFMESSDPSLRKASADNETSKASNVDNNVVHEKNKDRDDDDDDDDDGGLHSARHHPATTTSPSAATTTTSHQAFPAFPFQHDYRSFLHMSSTFSNLIMSTLLQNPAAHAAATFAASAWPFTTNAGDSSTQMSSSPPTIAAIVAATVAAATAWWASHGLLPTPVPLPAVPVPTPAAMDNVGNDHLEKQSTAFQEQNMASKSPDSSSDDSDETGITKIKADGDKEEVVAALQDSNVSHKKNPVDRSSCGSNTPSGSDVETDALEKEKEADANQPSVIELGNRRSKIRDNNNNQTTDSWKEVSQGGRIAFQALFARERLPQSFSPPQVEENVNGKQISDTSMPLAHNNLNKIQDSCNADQESAVDEEPGKSLKMRETGFKPYKRCSMEAKESQVGNANNHNDEKVCCKRLRLEAEAST