Information report for Bra030228
Gene Details
Functional Annotation
- Encodes a nuclear protein that acts as a floral repressor and that functions within the thermosensory pathway. SVP represses FT expression via direct binding to the vCArG III motif in the FT promoter.
Homologous
- Arabidopsis thaliana: AT2G22540.1
- Brassica napus: BnaA04G0147200ZS, GSBRNA2T00149752001, BnaC04G0438900ZS, GSBRNA2T00078179001, GSBRNA2T00127429001, BnaC08G0443200ZS
- Brassica oleracea: XP_013631060.1, Bo4g149800, XP_013600280.1, Bo8g101000
- Raphanus raphanistrum: RrC7998_p1
Gene Resources
- Pfam: PF01486 PF00319
- UniProt: A0A817ATA3
- EMBL: HG994358
- AlphaFoldDB: A0A817ATA3
- InterPro: IPR002100 , IPR002487 , IPR033896 , IPR036879 , IPR050142
- PANTHER: PTHR48019
- SUPFAM: SSF55455
- PROSITE: PS00350 , PS50066 , PS51297
- Gene3D: 3.40.1810.10
- SMR: A0A817ATA3
- CDD: cd00265
Sequences
gDNA Sequence
- >Bra030228
TGGCGAGAGAGAAGATTCAGATCAGGAAAATCGACAACGCGACGGCGAGACAAGTAACGTTCTCAAAACGAAGAAGAGGTCTTTTCAAAAAAGCTGAAGAGCTCTCCGTTCTCTGCGACGCTGATGTTGCCCTCATCGTCTTCTCTTCCACCGGAAAGCTCTTTGAGTTTTGTAGCTCCAGGTCTCTCTCTCTCTCTACCTTGTGTCTCTTTCGTTCTCTTTAGATTTCTCAAAACCTCTAAAGAATCGTCTCTAGATCCAGAAAAAGCTAGTTCTTACATGTGTATGTCATACACAAAAGTTTACTGTATCAAACCCGTATTGGACCACTAAATTTTTATCTAAGAATACCAAAAATGCATAAATAATACCATGGTAAACTCTTTATTTAGGCAAATAAGGTTATATACGTACAGTAATATTCAAGATAATGCAAATGTTTTAGTCATTTGAATATAATACCCTATATATTTTTGTATAATTATGTATACAGTATATAGTTATTGTGGTTGATATATGGAAGCCATCAATGTCATATTTATTTATAAATATGTGGTGACCATATGTTTATATAGATAGATGTTGGGAATCTAAAACCACTTATCATAAAGATATGATTTTTGGATTTCTGACCCACGAGTTATCAGTTCAGTTCCTCTTATCTTCGGGACATCTATACATACACGTTGACATATAAGTATATAGAGGTTAATTATTAAAAACGACAGTGTTTAACATGAAATACTGTATGTTTGAGAATCAGATTGTTAAAACGACAGTGTTTAACATTAAAACGACAGGTGTTTAACATGAATTTAGATTGTCTTTTGATTTCACATTTTGGGTATATTGTCGCTATTTTTATATCTAAGTACAAGGACATATCAATAATGTTGCTGTTTATAACATAATGATGGTATATCATTTACAGTCTTATATAGTAAGGTACTTATTGGAATGTGTTTTCATTATATAATGAAGCATGAGGGAAGTATTAGAGAGGCATAATTTGCAGTCAAAGAACTTGGAGAAGCTTGATCAGCCATCTCTTGAGTTACAGGTTAGCTTTGCTATTCTCTAGCTTATAAAATCTATTCCGTTATATTACCATTTTTGATTAATGTATCCTCATGTACATAAGTTTTATCAAGAAACTCTAAAACATTAAACTAATAGGACTCAAGCATTATATTGATTGTATGCGATTACACTATATTTTGACTATATGCGATCAAAACGAACTAAGAGTGTTTACAAGACTTTGTTTGTGATTCTCTGTATTATTATAGTTTGGTTTAAAACATTTTTTACATGAATGGTTGCGAGCTCTCTAAGGCTAGCTAGACATGTAGAATTAGTCAATGTGTATAGATTAACATGAATGGGTTTGCTTAAGTTCTTAAGTCAATGTTTTATTTGTTAGCTGGTTGAGAACAGTGACAATTCCCGGTTGAGCAAAGAAATTGCAGACAAGAGCCACCAACTAAGGTATACTACATATGCATATTCTACAAAAAAGAGTTCCCAACTATCATATTTCTAAGTACATGTTTATATATAATTTTATATAGGCAAATGAGAGGAGAGGAACTTCAAGGACTTAACATAGAAGAGCTGCAACAGCTGGAAAAGGCCCTTGAAGCTGGTTTGACGCGCGTGATTGAAACAAAGGTTGTTTTTTACTTATTACTTATTGATGTTAAAAGTAGTAAATTGTATGATACAACGTATATTTTTCGAAGCTTACGAATGCGAGATGTTGTTTGCAGAGTGAGAAGATTATGAGTGAGATCAGTGACCTTCAAAGAAAGGTAAAATATCGAAATGAGGTTTATTACTTATTGATTTTGGCAATTTTGAGAGTTCAAATCTCGCTTTTTGGTGTTTAGGGAATGAAATTGATGGATGAGAACAAGCGGCTAAGGCAGCATGTACACATCTTATCCTTTGTCCTATAACACATATCTTTGATCATACTTTGACATAAATGGTTAAACCAAGTGATTAGCGTGGTTAAATAGTGTCTTATCTCTATGGAAATTAATATAGTTAGTCAGCCTTCAGGTAAAACCTTTGGACATTCTTCCAATGAAAAATGTAAATTCATCTGTGGACACTTGGTCCAAGATGTAGAGTGTGCATTGTTTTGTTTCAACTTGACGTTAATAAATAAGTATATATTTTTTTTTTCTTTTATGTTTTTTCAATCTTTTGTTTTTATGTTTTTCAAACTTGAGGTCCAAAATGTTTTTCAATCTTGATTTTCCAGGGAACACAACTAACAGAAGAGAACGAGCGACTAGGCAAGCAAGTAAGTCGGGTATTATTTCAAGTTTAATGCTAAATTTGGAACTTTAATTTTGTTTAATGCTAAATTTGGAACTTTTGTTTGTGTTATGGTGAAGATATATAATAATATGCATGAAAGATACGGTGGTGTTGAGTCGGAGAAGACCGCCGTGTACGAGGAAGGGCAGTCGTCAGAGTCCATTACTAACGCCGGAAACTCCACCGGCGCTCCTGTTGACTCCGAGAGCTCCGATACCTCTCTTAGGCTCGGGTAA
CDS Sequence
- >Bra030228
ATGGCGAGAGAGAAGATTCAGATCAGGAAAATCGACAACGCGACGGCGAGACAAGTAACGTTCTCAAAACGAAGAAGAGGTCTTTTCAAAAAAGCTGAAGAGCTCTCCGTTCTCTGCGACGCTGATGTTGCCCTCATCGTCTTCTCTTCCACCGGAAAGCTCTTTGAGTTTTGTAGCTCCAGCATGAGGGAAGTATTAGAGAGGCATAATTTGCAGTCAAAGAACTTGGAGAAGCTTGATCAGCCATCTCTTGAGTTACAGCTGGTTGAGAACAGTGACAATTCCCGGTTGAGCAAAGAAATTGCAGACAAGAGCCACCAACTAAGGCAAATGAGAGGAGAGGAACTTCAAGGACTTAACATAGAAGAGCTGCAACAGCTGGAAAAGGCCCTTGAAGCTGGTTTGACGCGCGTGATTGAAACAAAGAGTGAGAAGATTATGAGTGAGATCAGTGACCTTCAAAGAAAGGGAATGAAATTGATGGATGAGAACAAGCGGCTAAGGCAGCATGGAACACAACTAACAGAAGAGAACGAGCGACTAGGCAAGCAAATATATAATAATATGCATGAAAGATACGGTGGTGTTGAGTCGGAGAAGACCGCCGTGTACGAGGAAGGGCAGTCGTCAGAGTCCATTACTAACGCCGGAAACTCCACCGGCGCTCCTGTTGACTCCGAGAGCTCCGATACCTCTCTTAGGCTCGGGTAA
Protein Sequence
- >Bra030228
MAREKIQIRKIDNATARQVTFSKRRRGLFKKAEELSVLCDADVALIVFSSTGKLFEFCSSSMREVLERHNLQSKNLEKLDQPSLELQLVENSDNSRLSKEIADKSHQLRQMRGEELQGLNIEELQQLEKALEAGLTRVIETKSEKIMSEISDLQRKGMKLMDENKRLRQHGTQLTEENERLGKQIYNNMHERYGGVESEKTAVYEEGQSSESITNAGNSTGAPVDSESSDTSLRLG