Information report for Bra029666
Gene Details
Functional Annotation
- This gene belongs to the CO (CONSTANS) gene family. This gene family is divided in three subgroups: groups III, to which COL9 belongs, is characterised by one B-box (supposed to regulate protein-protein interactions) and a second diverged zinc finger. COL9 downregulates expression of CO (CONSTANS) as well as FT and SOC1 which are known regulatory targets of CO.
Homologous
- Brassica napus: GSBRNA2T00059507001, BnaA05G0456200ZS, GSBRNA2T00038967001, BnaC05G0514700ZS, GSBRNA2T00125199001, BnaA03G0310300ZS
- Brassica oleracea: XP_013586534.1, XP_013586533.1, Bo5g141290, XP_013622990.1, XP_013622989.1, Bo3g061400
- Raphanus raphanistrum: RrC508_p5
Sequences
gDNA Sequence
- >Bra029666
CAATAGCTTCTGGTTGGGGTGAGTGGGTCATAGTCATAAGCTTCACCAGCTTTGACAAATCTTCCCTTTACACGCCGTCTCACATCAGCTCTTGCTTTGCGAGAAGCATACCTCACTGTCTTATCAAACCTGTATCAAACAAAAAAACAAAGAATGTTTCATTTAGAATACACTTCAAACTTGCTTACATGATGCAATGCACTGGATTCGCAATGGCACTTACTTGCGAGCCTTCTTTTTCTCCTTGTAACGCATAACCGCGTTATTACGGGTCACTGAATGTGAGGAAGCATTGTTATCCTGTGATGTTTGAGGATACCATGGTGGCTCACCGGAGAGCTGCATTGAAGACGATGCACCACATTCTTGAAAATCTCCAGCGCTACTATCTCCTGTGACTCCAGAGAATGATATGTTGGAATGTGCTGGTTTCGATGTGAAGCAAATGATTGGTTCTGTTTTTGAACTCATGAAAGAATCATCATTGCTCTCAGCTGGCTGTACAAGATTCCCTCCCTGGATTAAGAGAAGGAACAAGATCATCACTAGAATCAAAGGAACATGTGAACCTCATAAAATAGCAAAACATACCTCAGGAGCTGCTGCTTGGTGATGTTTCTGGAAAAGACTATCAATTCCACCTTGTCCAAATAGCTCTCCAGAGGTGTTAAAGGCTGTCCCAAAAAGCTCTTCATAGTTCTCAAGAGCCAAGTCAACTTCATCCATACCCAAGTTCCCATAAAAGTCATCTTCACATACTCTTACATCCTTCAAACACCATAAACAAACAAGAACTTGAATTTAGATACATTTTTTTTTGTATTTTCAATGCACTTTTTACCAACTAATAATATGATTAATTGTAATCTTTACAAAAAAAAAAACTAACTACATTTACTGAACTCTTATTTAAAATTATGCGAAATAGATAATCACGAAAAATTATTCCTTTAATACTGAAATTTAATATGTTTAATTATGTATGAAAAAAAACTAAAACATGTATCATTTTGAAACCGAGAGAGTATATACCTTGGGAAATGATGAAGTTGCAGGTGCTGCAGAACTGGTTTCAGGCCTTGAGGAGGAGCCGGCGACATCTTTCTTCTCCTCATTACAGTTTTGGTTGTTCTGACCATCATCATCTATATTCATCAACCCCATTTCTTGTTCACAACCAGATTGTCCAGCTAAGTCCAAACAGAAAGACCATATAGAAGCGAGCTCCGAGCTAGAAGGGCAACCAGAATAGCAGCTTATGGTTTGCCTCTTGTGATTATTTGATGAGGAAGAAGAATTGTTGTTGTTGTTGTGGCTAAACCAATCACAGTTTTTACAGGAGGAAGAAGAATTGTTGTTGTTGTTGTGGCTAGACCAATCACAGTTTTGACAGAGGGAAACTCTTTCTTCAACACACCTGACTGTAGCAGGCTGAGAATTGCATCTCTCGCAGACGAGTGTCCTAGAATGTCGCTTGGACAATGCGTTAGCGGAGTGGACGCTCCTGTCGCAGGAGAGGCAGAGACAGGCTGCATCTGAACGACAGTACACCATTGAACGTTGTTCACCACAGAAGTCACACATGTAACCCAT
CDS Sequence
- >Bra029666
ATGGGTTACATGTGTGACTTCTGTGGTGAACAACGTTCAATGGTGTACTGTCGTTCAGATGCAGCCTGTCTCTGCCTCTCCTGCGACAGGAGCGTCCACTCCGCTAACGCATTGTCCAAGCGACATTCTAGGACACTCGTCTGCGAGAGATGCAATTCTCAGCCTGCTACAGTCAGGTGTGTTGAAGAAAGAGTTTCCCTCTGTCAAAACTGTGATTGGTCTAGCCACAACAACAACAACAATTCTTCTTCCTCCTGTAAAAACTGTGATTGGTTTAGCCACAACAACAACAACAATTCTTCTTCCTCATCAAATAATCACAAGAGGCAAACCATAAGCTGCTATTCTGGTTGCCCTTCTAGCTCGGAGCTCGCTTCTATATGGTCTTTCTGTTTGGACTTAGCTGGACAATCTGGTTGTGAACAAGAAATGGGGTTGATGAATATAGATGATGATGGTCAGAACAACCAAAACTGTAATGAGGAGAAGAAAGATGTCGCCGGCTCCTCCTCAAGGCCTGAAACCAGTTCTGCAGCACCTGCAACTTCATCATTTCCCAAGGATGTAAGAGTATGTGAAGATGACTTTTATGGGAACTTGGGTATGGATGAAGTTGACTTGGCTCTTGAGAACTATGAAGAGCTTTTTGGGACAGCCTTTAACACCTCTGGAGAGCTATTTGGACAAGGTGGAATTGATAGTCTTTTCCAGAAACATCACCAAGCAGCAGCTCCTGAGGGAGGGAATCTTGTACAGCCAGCTGAGAGCAATGATGATTCTTTCATGAGTTCAAAAACAGAACCAATCATTTGCTTCACATCGAAACCAGCACATTCCAACATATCATTCTCTGGAGTCACAGGAGATAGTAGCGCTGGAGATTTTCAAGAATGTGGTGCATCGTCTTCAATGCAGCTCTCCGGTGAGCCACCATGGTATCCTCAAACATCACAGGATAACAATGCTTCCTCACATTCAGTGACCCGTAATAACGCGGTTATGCGTTACAAGGAGAAAAAGAAGGCTCGCAAGTTTGATAAGACAGTGAGGTATGCTTCTCGCAAAGCAAGAGCTGATGTGAGACGGCGTGTAAAGGGAAGATTTGTCAAAGCTGGTGAAGCTTATGACTATGACCCACTCACCCCAACCAGAAGCTATTGA
Protein Sequence
- >Bra029666
MGYMCDFCGEQRSMVYCRSDAACLCLSCDRSVHSANALSKRHSRTLVCERCNSQPATVRCVEERVSLCQNCDWSSHNNNNNSSSSCKNCDWFSHNNNNNSSSSSNNHKRQTISCYSGCPSSSELASIWSFCLDLAGQSGCEQEMGLMNIDDDGQNNQNCNEEKKDVAGSSSRPETSSAAPATSSFPKDVRVCEDDFYGNLGMDEVDLALENYEELFGTAFNTSGELFGQGGIDSLFQKHHQAAAPEGGNLVQPAESNDDSFMSSKTEPIICFTSKPAHSNISFSGVTGDSSAGDFQECGASSSMQLSGEPPWYPQTSQDNNASSHSVTRNNAVMRYKEKKKARKFDKTVRYASRKARADVRRRVKGRFVKAGEAYDYDPLTPTRSY