Information report for Bra029365
Gene Details
Functional Annotation
- Encodes a MADS box protein. Regulates proanthocyanidin biosynthesis in the inner-most cell layer of the seed coat. Also controls cell shape of the inner-most cell layer of the seed coat. Also shown to be necessary for determining the identity of the endothelial layer within the ovule. Paralogous to GOA. Plays a maternal role in fertilization and seed development.
Homologous
- Brassica napus: BnaA02G0389900ZS, GSBRNA2T00087024001, BnaC02G0521400ZS, GSBRNA2T00071718001, BnaC07G0373800ZS, GSBRNA2T00082681001, GSBRNA2T00113632001
- Brassica oleracea: XP_013618046.1, XP_013618049.1, XP_013618048.1, XP_013618047.1, Bo2g160980, XP_013596700.1, XP_013596702.1, Bo7g097810
- Raphanus raphanistrum: RrC3695_p1, RrC5510_p4
Gene Resources
- Pfam: PF01486 PF00319
- UniProt: A0A816XE21
- EMBL: HG994356
- AlphaFoldDB: A0A816XE21
- InterPro: IPR002100 , IPR002487 , IPR033896 , IPR036879 , IPR050142
- PANTHER: PTHR48019
- SUPFAM: SSF55455
- PROSITE: PS50066 , PS51297
- Gene3D: 3.40.1810.10
- SMR: A0A816XE21
- CDD: cd00265
Sequences
gDNA Sequence
- >Bra029365
CAGATATTGGCCATTGGATCGTTTTGAAGATTAGGCTGAGCAAGGTGGAGATGGTAATTGAGATCAATCTCGGACGGATGAGTAGCAAGCTGAAGAAAACTGTTTGGTTGTTGTTGCTGATCATTATAGAACTGAACTTGCTCTAGAAACTGTTGATATTCCCCTGGTTTGGTCTCTATCCCACCTTGCTGAAACTCAGTCGTGGCACGATGCCCATGAAGCTGCAATATAGTTAACAACGGTATAGATAGAAGAAAATGTCATTCAATCGAAAAGCTGCAAACAAATGGGCATTTTTAGCTAGTGATTAACCAAACTTACCCAACGGTACATATTGTTGTTATCATCTTCTAGCATCCGCCTCTGATTATATGCGTAAACCATGGTATTGATCATTAAAAAGATCATTAAGAATTTTTTTATTAAATGAGTGATTAGAGAGCGACCTTTCTGCTTAGATTCTCCAACTGTTGTTGCATCAACTCATTCTTCAATATATTAACATTAGAGATAGAAAAGAGATTAAACCAAAGCTGTAATCAAATATAGTTTAAGAGAATATATTGCTATGATCGCATATATTACGTTACCTTACGCTGACGAATTTTAAGCACAGAATGTTCGAGCTGTTGCTCTAGTCCATCGAGCTCGTGTGGAGGAATGGAGGCTAGGCCATGTCCACGGTATAGACGCTGACGGAGCTCAAGCTTACATGTCTCTCTTCTTAGTACTTCTATCTCATGACAGAATTCCTCCTATATATACACACGAAAACTCCAAATTAAATGATTAATTGATTTTTGTGAAAATGCTATTTATGTTTTTGTGAATTGGTAAAACCAAATGAATATGTATGTTGTATATACCCGGTTGTCATTAGGATCAGGGAGTCGCAATCCGTTGGTCTGCAAGTATCGGTCAATGAGCTGAGGCATCCTATTTAACATTGGTAATTATGAAATGTGATCAAATTAGTATCTTTAACCTCACAACGTCAAGATTCCAATAATCACTGGAGGAACACAAGTATCATAGCTAGCCTAGTCCTCAAGATTAGGATCTATAGATATACTTTGACAAACAAAAACAAGAGGATCGGTATTCTGGCCATAAAAATTGGTTACAAGAAAACAAAATTAAAAGGTGTTATCACCTCTTTATTTAGTAAAATAAGACATCAATATAATAGCATACCTTTCTTCTCATTTTTTGACTAGGGCTATATGTGAATAAATCAGTCTTCTGGTTATGACTTATATATGAAACTTATAATTAGCACAGCTTTATAATTTCTTGTAAATACACAATACACTACAACAGAAACTGAGATCCTTTATGAAAAAGGTTGAACAAGAAATGTCAAAATCTCTGCAGATCTGTTTGTTCCGCAGATGTAGAATATATAGAATTTGACCCAAATATACCAATAATGATCATATATATATATATATATATATATGCATGTACTCATAATACAAAAATAAAAACTGCTAGAATAAATTGATAGCATCAGGGATCTTAACTTCTGGGCCAAATTTAAATCTTAGAACATACTAGTATTCATTAATACCTGCTACTTCAGAAGCTAATGATGAAAACTATCTGTTCACAAGCACGAGGAGTATACCTCTCTCATACCCTCATTTAAATTAGACCAATATGGTTGACCAAACAAAGTAAGAAAAGATCAATACATACATGTAGACATGTGTGTACAGATCTATGAAACCCTAATTTTAGAGAAAGAGAGATAGAGAACTGGAAGAAGCTAACGTGAGGGGTTCGGTGCAGTGCTGGTAGAGCTTTCCAGTGGCGGAGAAGACGATGAGACCGATGTGAGCATCGCAGAGAACAGAGAGCTCATGAGCTTTCTTGATAACACCACTTCTTCTCTTGGAAAAGGTCACTTGCCTCGCTGTCCGATTCTCTATCTTCTTTATCTCTATCTTCCCTCTTCCCAT
CDS Sequence
- >Bra029365
ATGGGAAGAGGGAAGATAGAGATAAAGAAGATAGAGAATCGGACAGCGAGGCAAGTGACCTTTTCCAAGAGAAGAAGTGGTGTTATCAAGAAAGCTCATGAGCTCTCTGTTCTCTGCGATGCTCACATCGGTCTCATCGTCTTCTCCGCCACTGGAAAGCTCTACCAGCACTGCACCGAACCCCTCACGATGCCTCAGCTCATTGACCGATACTTGCAGACCAACGGATTGCGACTCCCTGATCCTAATGACAACCGGGAGGAATTCTGTCATGAGATAGAAGTACTAAGAAGAGAGACATGTAAGCTTGAGCTCCGTCAGCGTCTATACCGTGGACATGGCCTAGCCTCCATTCCTCCACACGAGCTCGATGGACTAGAGCAACAGCTCGAACATTCTGTGCTTAAAATTCGTCAGCGTAAGAATGAGTTGATGCAACAACAGTTGGAGAATCTAAGCAGAAAGAGGCGGATGCTAGAAGATGATAACAACAATATGTACCGTTGGCTTCATGGGCATCGTGCCACGACTGAGTTTCAGCAAGGTGGGATAGAGACCAAACCAGGGGAATATCAACAGTTTCTAGAGCAAGTTCAGTTCTATAATGATCAGCAACAACAACCAAACAGTTTTCTTCAGCTTGCTACTCATCCGTCCGAGATTGATCTCAATTACCATCTCCACCTTGCTCAGCCTAATCTTCAAAACGATCCAATGGCCAATATCTGA
Protein Sequence
- >Bra029365
MGRGKIEIKKIENRTARQVTFSKRRSGVIKKAHELSVLCDAHIGLIVFSATGKLYQHCTEPLTMPQLIDRYLQTNGLRLPDPNDNREEFCHEIEVLRRETCKLELRQRLYRGHGLASIPPHELDGLEQQLEHSVLKIRQRKNELMQQQLENLSRKRRMLEDDNNNMYRWLHGHRATTEFQQGGIETKPGEYQQFLEQVQFYNDQQQQPNSFLQLATHPSEIDLNYHLHLAQPNLQNDPMANI