Information report for Bra027014
Gene Details
Functional Annotation
- Encodes a homolog of human Lysine-Specific Demethylase1. Involved in H3K4 methylation of target genes including the flowering time loci FLC and FWA. Located in nucleus. Negatively regulates root elongation. Involved in repression of LRP1 via histone deacetylation.
Homologous
- Brassica napus: BnaA09G0152900ZS, BnaC09G0167200ZS
- Brassica oleracea: Bo9g036780
- Glycine max: Glyma.09G185800
- Gossypium hirsutum: Gohir.D05G183500, Gohir.A05G180500
- Juglans regia: Jr11_19040
- Manihot esculenta: MANES_11G098200
- Populus trichocarpa: POPTR_002G013100v3
- Prunus avium: Pav_sc0000367.1_g050.1.mk
- Prunus persica: PRUPE_1G356300
- Rosa chinensis: RchiOBHm_Chr6g0304051
Sequences
gDNA Sequence
- >Bra027014
TGGAGCAAAACCAAGAGATCCGACCCGAAAGCCCGGAAAACCCGAAGATGGCCACGGATAATTTGACCAACGCCCAAGCCTCTCCAACGAAGGAAGCCGCCACGCCCTCCAACACCGACGGCAAAATTGACAAGGACGTCGCCGCGGCGGATCCAAACCCTACACCCGCCGCGAAGCTGCAACCAAGCGAATCCGACGAGGAGGTGGACCTCCCAAGCATCTCAGAATCCCTCGGAGAAGAAGAATCCTCCGATCTCGTAACAGAGCCACAATCGCAAAACCCTAATCCACTAGAGCCGGGACCCAGGGCGAGAAAACGACGCCGTAGGAAGCGTTTCTTCACGGAGATAAACGCGAACCCAGCTTTCCCTCGTAACCGCCGCAACAGCGTCGGGAAAGAGCTCGATTCCGAAGCCATAACGGCGATGTCGGTAGGGTTCCCGGTAAACTCGCTCACAGAGGAAGAGATCGAAGCCAATGTGGTATCGATCATCGGAGGCAAAGAGCAGGCGAACTACATCGTCGTGAGGAACCACATCATCGCCTTGTGGAGATCCAACGTCTCGAATTGGCTTACGAGAGATCACGCTCTTGAGTCTATACGATTGGAGCATAAGACGTTGGTTGATACTGCTTACAAGTTCCTTCTTGAGCACGGTTATATTAATTTCGGTTTAGCTCCGGTTATCAAAGAGGCGAAATTGAGATCCTTTGATGGTTTGGAGCCGCCTAATGTGGTTGTTGTGGGTGCCGGTTTAGCTGGTTTGGTGGCTGCTAGGCAGTTGTTGTCGATGGGGTTTAGGGTTTTGGTTTTGGAAGGGAGAGATAGACCGGGCGGGCGGGTTAAGACCCGGAAGATGAGAGGTGGGGATGGTGTTGAAGCAATGGCTGATGTTGGTGGGAGTGTGTTGACTGGGATTAATGGGAACCCTCTTGGCGTGTTGGCGAGGCAGCTTGGTTTGCCTCTCCATAAGGTTAGAGATATATGTCCTTTGTATCTACCTAGCGGCGAGCTTGTTGATGTTGGTGTTGATTCTAAGATAGAGGCTTCGTTTAATAAGTTGCTGGATAGGGTTTGTAAGCTTAGGCAGTCGATGATAGAGGAGATTAAGTCAGTAGATGTGCCGTTAGGTGAAGCGCTGGAGACTTTTAGGTTGGTTTACGGTGTTGCTGAGGATCAGGAGGAGAGGATGCTGTTTGATTGGCATTTAGCGAATTTGGAGTATGCGAATGCTACACTGTTGGGGAACTTGTCGATGGCGTATTGGGATCAGGATGATCCGTACGAGATGGGGGGTGATCATTGCTTCATCCCCGGCGGGAACGAGACGTTTGTGCACGCCTTGGCTGAGAATCTGCCTGTTTTTTATGGGAATGTTGTGGAGAGCATTAGGTATGGAAGTGACGGGGTTGTGGTTTACGCGGGGGATAAGGAGTTCTCCTGCGACATGGCTCTCTGCACGGTTCCGTTGGGTGTTCTGAAGAAAGGCGGCATCGGGTTTGTTCCTGAGCTTCCTGAGAAGAAGAAAGAAGCGATTCAGAGATTAGGATATGGGTTGTTGAACAAAGTGGCGATGTTGTTTCCTTATAACTTTTGGGGGGAAGAGATTGATACGTTTGGGAGATTAACAGAAGATTCGAGCACGAGAGGAGAGTTCTTCTTGTTCTATAGCTACTCTTCCGTCTCTGGTGGTCCGTTACTTGTGGCACTTGTAGCTGGAGACGCCGCGGAAAGGTTTGAGACGATGTCGCCTACTGATTCCGTTAAAAGGGTGTTGCAGATACTACGCGGGATTTATCACCCGAAAGGGATCGTTGTTCCTGATCCGGTTCAAGCGCTCTGTTCCAGATGGGGACAAGACAAGTTTTCGTACGGTTCTTACTCGTATGTTGCGGTGGGATCATCTGGTGATGATTATGACATTTTAGCTGAGAGTGTTGGAGATGGAAGAGTGTTCTTTGCTGGTGAAGCGACGAACAAACAGTATCCGGCTACAATGCATGGAGCTTTCTTAAGTGGAATGAGAGAAGCAGCAAACATACTTAGAGTTGCTAGAAGAAGGGCATCAGAATCGGCTTCAAACCTTGCTAAGTGA
CDS Sequence
- >Bra027014
ATGGAGCAAAACCAAGAGATCCGACCCGAAAGCCCGGAAAACCCGAAGATGGCCACGGATAATTTGACCAACGCCCAAGCCTCTCCAACGAAGGAAGCCGCCACGCCCTCCAACACCGACGGCAAAATTGACAAGGACGTCGCCGCGGCGGATCCAAACCCTACACCCGCCGCGAAGCTGCAACCAAGCGAATCCGACGAGGAGGTGGACCTCCCAAGCATCTCAGAATCCCTCGGAGAAGAAGAATCCTCCGATCTCGTAACAGAGCCACAATCGCAAAACCCTAATCCACTAGAGCCGGGACCCAGGGCGAGAAAACGACGCCGTAGGAAGCGTTTCTTCACGGAGATAAACGCGAACCCAGCTTTCCCTCGTAACCGCCGCAACAGCGTCGGGAAAGAGCTCGATTCCGAAGCCATAACGGCGATGTCGGTAGGGTTCCCGGTAAACTCGCTCACAGAGGAAGAGATCGAAGCCAATGTGGTATCGATCATCGGAGGCAAAGAGCAGGCGAACTACATCGTCGTGAGGAACCACATCATCGCCTTGTGGAGATCCAACGTCTCGAATTGGCTTACGAGAGATCACGCTCTTGAGTCTATACGATTGGAGCATAAGACGTTGGTTGATACTGCTTACAAGTTCCTTCTTGAGCACGGTTATATTAATTTCGGTTTAGCTCCGGTTATCAAAGAGGCGAAATTGAGATCCTTTGATGGTTTGGAGCCGCCTAATGTGGTTGTTGTGGGTGCCGGTTTAGCTGGTTTGGTGGCTGCTAGGCAGTTGTTGTCGATGGGGTTTAGGGTTTTGGTTTTGGAAGGGAGAGATAGACCGGGCGGGCGGGTTAAGACCCGGAAGATGAGAGGTGGGGATGGTGTTGAAGCAATGGCTGATGTTGGTGGGAGTGTGTTGACTGGGATTAATGGGAACCCTCTTGGCGTGTTGGCGAGGCAGCTTGGTTTGCCTCTCCATAAGGTTAGAGATATATGTCCTTTGTATCTACCTAGCGGCGAGCTTGTTGATGTTGGTGTTGATTCTAAGATAGAGGCTTCGTTTAATAAGTTGCTGGATAGGGTTTGTAAGCTTAGGCAGTCGATGATAGAGGAGATTAAGTCAGTAGATGTGCCGTTAGGTGAAGCGCTGGAGACTTTTAGGTTGGTTTACGGTGTTGCTGAGGATCAGGAGGAGAGGATGCTGTTTGATTGGCATTTAGCGAATTTGGAGTATGCGAATGCTACACTGTTGGGGAACTTGTCGATGGCGTATTGGGATCAGGATGATCCGTACGAGATGGGGGGTGATCATTGCTTCATCCCCGGCGGGAACGAGACGTTTGTGCACGCCTTGGCTGAGAATCTGCCTGTTTTTTATGGGAATGTTGTGGAGAGCATTAGGTATGGAAGTGACGGGGTTGTGGTTTACGCGGGGGATAAGGAGTTCTCCTGCGACATGGCTCTCTGCACGGTTCCGTTGGGTGTTCTGAAGAAAGGCGGCATCGGGTTTGTTCCTGAGCTTCCTGAGAAGAAGAAAGAAGCGATTCAGAGATTAGGATATGGGTTGTTGAACAAAGTGGCGATGTTGTTTCCTTATAACTTTTGGGGGGAAGAGATTGATACGTTTGGGAGATTAACAGAAGATTCGAGCACGAGAGGAGAGTTCTTCTTGTTCTATAGCTACTCTTCCGTCTCTGGTGGTCCGTTACTTGTGGCACTTGTAGCTGGAGACGCCGCGGAAAGGTTTGAGACGATGTCGCCTACTGATTCCGTTAAAAGGGTGTTGCAGATACTACGCGGGATTTATCACCCGAAAGGGATCGTTGTTCCTGATCCGGTTCAAGCGCTCTGTTCCAGATGGGGACAAGACAAGTTTTCGTACGGTTCTTACTCGTATGTTGCGGTGGGATCATCTGGTGATGATTATGACATTTTAGCTGAGAGTGTTGGAGATGGAAGAGTGTTCTTTGCTGGTGAAGCGACGAACAAACAGTATCCGGCTACAATGCATGGAGCTTTCTTAAGTGGAATGAGAGAAGCAGCAAACATACTTAGAGTTGCTAGAAGAAGGGCATCAGAATCGGCTTCAAACCTTGCTAAGTGA
Protein Sequence
- >Bra027014
MEQNQEIRPESPENPKMATDNLTNAQASPTKEAATPSNTDGKIDKDVAAADPNPTPAAKLQPSESDEEVDLPSISESLGEEESSDLVTEPQSQNPNPLEPGPRARKRRRRKRFFTEINANPAFPRNRRNSVGKELDSEAITAMSVGFPVNSLTEEEIEANVVSIIGGKEQANYIVVRNHIIALWRSNVSNWLTRDHALESIRLEHKTLVDTAYKFLLEHGYINFGLAPVIKEAKLRSFDGLEPPNVVVVGAGLAGLVAARQLLSMGFRVLVLEGRDRPGGRVKTRKMRGGDGVEAMADVGGSVLTGINGNPLGVLARQLGLPLHKVRDICPLYLPSGELVDVGVDSKIEASFNKLLDRVCKLRQSMIEEIKSVDVPLGEALETFRLVYGVAEDQEERMLFDWHLANLEYANATLLGNLSMAYWDQDDPYEMGGDHCFIPGGNETFVHALAENLPVFYGNVVESIRYGSDGVVVYAGDKEFSCDMALCTVPLGVLKKGGIGFVPELPEKKKEAIQRLGYGLLNKVAMLFPYNFWGEEIDTFGRLTEDSSTRGEFFLFYSYSSVSGGPLLVALVAGDAAERFETMSPTDSVKRVLQILRGIYHPKGIVVPDPVQALCSRWGQDKFSYGSYSYVAVGSSGDDYDILAESVGDGRVFFAGEATNKQYPATMHGAFLSGMREAANILRVARRRASESASNLAK