Information report for Bra020445
Gene Details
Functional Annotation
- Encodes a plant homeodomain protein VERNALIZATION INSENSITIVE 3 (VIN3). In planta VIN3 and VRN2, VERNALIZATION 2, are part of a large protein complex that can include the polycomb group (PcG) proteins FERTILIZATION INDEPENDENT ENDOSPERM (FIE), CURLY LEAF (CLF), and SWINGER (SWN or EZA1). The complex has a role in establishing FLC (FLOWERING LOCUS C) repression during vernalization.
Homologous
- Brassica napus: BnaA06G0406800ZS, BnaA02G0118200ZS, BnaC02G0145400ZS, BnaA03G0112400ZS, BnaC03G0129200ZS
- Brassica oleracea: Bo2g032410, Bo3g019340
- Gossypium hirsutum: Gohir.D05G005000, Gohir.A05G004280, Gohir.A08G019500, Gohir.D08G030100
- Vitis vinifera: VIT_18s0001g07650
Sequences
gDNA Sequence
- >Bra020445
TGCAAGCTGCTTCGGTAAATAGCTTCTCTTTGTTCGATGTTGTTGTTGGAAGTTTTTCATTCGGTGAAACAACGAACCAATCCTCATTTTATTTACTTTTATTTTAGTTTTTTAGTTTTCTGGTATTTATTTTTTAATTCACAAAAATTCTCAATGTTTTGTTCTTCCTAGAGCTTAACGACCGTGTCCTCCTCGAATCCCTTGTCTTATACATACACATTAAGACAAATAGAGCTTCATGGGGTTTTCCTTTTGGTTGTTTAAACTTCTAATTTTGAAAAAAAAAAATTGGAAAATAAAATCTGAGCTTTATCGATCTCTTTTGTTCTTGCGGAGCGTGAGTACATGTTTTACATGCTTCTTTTCCATAGAATCTTTTTAACTTTTGTCTTCGTGTTTGTCTGAAATCTGATCTGCAGCTCTCAAAGAATTGGCGTTTTGATAGTACTGTGGGTCCAGAAGACATAGATCCTTCTTCATTTCAAGGTACGTCATCTTCTTTCTTCTTGTCGACGTGAATGTCTTTTTGTCTTCTCATTGTTCTAGTTCGACGCGTTTATATGCTTTTAGGTCATTAACGCGACGTCGTTTTAATTCATCAGAACTGTTGAAACATGATCGTATACGCTTATTGATTCATCGCCATTGTGAATATATTGGTTGTTCTTGACAAATTGTGAATAAATTTTACCCAAACATGTCATAATAACTTTTTTTTTGTTATTCTTATTCATTTATACTTGGCAATACGATTATGTTGAAGAGATTTTAGGGTTAGAGGATTGTGCTTTTGGCTTTTGCAGGTGTTACGTGCGCTGACTTTCCCAAAAAGAAAGGTTTGAGTGTAAGCGAGAGGAGGGAACTGATCCACGCATTGTCCAAGCAGCCAGAAGAAGCTTCAGAGCTTTTAAACTCATGGAGCCGAGATGAGATAATGAAGATCATATGTGCAGAGATGGGGAAAGAGAGGAAGTACACTGGTCTAGCCAAACCAAAACTCATAGAAACCCTACTCAAACTTGTGTCTCGTCCTCTCGGAGAAACCTCTCGTCCTGACCGTAAAAACTCGAAAAAGAAACGGAAGACGACCAGTTACATCATTTGCTGCGAGAATGTAGCTTGTAGAGCTGCGCTTGGAACCGAGGATACCTTTTGCAGGAAGTGTTCTTGCTGCGTTTGTCAGAACTATGATGAAGATAAAGATCCGAGTCTATGGATTACTTGTGAGGCTTGTGGAGTGTCTTGTCATTTAGAATGCGCTTTGGAGCAAGAGAGGTATGGGATTGGGTGTGATGATGATGAAGTAGGAAGAGCGCTTGATGGTAGGTTTTATTGCGTGTTTTGCGGCAAAGATAATGACTTACTCGGGTAAGAATCGATGGATATACACAATGAACGTAGATCGTTTGGAGGATGTGTAATGTAATATTATGTGTGTGTACTTACAGATGCTGGAGGCAACAAGTGAAGGTGGCGAAAGAGACTCAACGTGTGGATGTTCTTTGCTACCGTGTTTCTTTAGGACAGAAGCTGCTGAGAGGTACGAGGAAGTATCGATATCTGTTGGAACTCATGGACGAGGCGGTGAAGAAGCTGGAGGGTGATGTGGGTCCGTTATCGGGTTGCGCGATGAAGATGGCTCGTGGTATCGTCCAAAGTCTATCTTCGGGAACTCAAGTTCAAAAGCTGTGTTCTCTGGCAATGGAAGCTTTGGACAAAATGGTCTCACCACCATCAGAATCTGTTTCAGGACAAGGTTAGTTTTCTGTTCACACATTGTACTTATGTTTTGGAGTCAGAAGATGTTGACTTTAGTTCTCGTTAGGTGACAAGTTGAGCGTGAGAGTGGAAGAGGTTCAAGCAAGATCAGTCACTGTGATATTAGACTCCGAGGAGCCGTCTTCCTCACAAAACCAGACCACTGGGGTGGAGGGTGATGAAGATGAAGCTGGGAACATGCAAAGCCTATTGATTAACTCTAGCAGTGGTCTTTGCAGTAATCCATCTTTACCGGAAGATGAATTTAACAATGCCCTTATACGCTGCTGCAAAGAAAATGGGGACAATGACAACATTGAAGTAGAATCTGAGCTTGAAGACGAGAGGCTCATAAAAAGGAAAGTTAACGAGCCAGAGGGAAGAGAGTTGCTTGTTGTAACACCCTGCCGAAGAGATGCTTATAAGGGCAAGCAAGAAGGGAACAAAAGATCCAAATCAAGAACAGCAACCGTGAACGAGAAACCTGAGACCAATGTAGCAAATGGATTTGGAGGAGATAATGACTTGGTTCACGTCGTCAAGACCATCAGATGCTTAGAGCAAGAAGGGCATATAGACAAGAGTTTCCGGAAAAGGTTCTTGACATGGTATAGCTTAAGAGCTACTCATCGTGAAGTTAGAGTTGTGAAGCTTTTTATCGAGACATTCATGGATGATCTGCCCTCTTTGGGACAACAGCTTATGCATACATTCTCAGATTGCACACTCAACAAGAGATCATCAGCAAGTGGTGTTGTACCTGCTGGAATCTGCCTCAAGCTCTGGCATTAA
CDS Sequence
- >Bra020445
ATGCAAGCTGCTTCGCTCTCAAAGAATTGGCGTTTTGATAGTACTGTGGGTCCAGAAGACATAGATCCTTCTTCATTTCAAGGTGTTACGTGCGCTGACTTTCCCAAAAAGAAAGGTTTGAGTGTAAGCGAGAGGAGGGAACTGATCCACGCATTGTCCAAGCAGCCAGAAGAAGCTTCAGAGCTTTTAAACTCATGGAGCCGAGATGAGATAATGAAGATCATATGTGCAGAGATGGGGAAAGAGAGGAAGTACACTGGTCTAGCCAAACCAAAACTCATAGAAACCCTACTCAAACTTGTGTCTCGTCCTCTCGGAGAAACCTCTCGTCCTGACCGTAAAAACTCGAAAAAGAAACGGAAGACGACCAGTTACATCATTTGCTGCGAGAATGTAGCTTGTAGAGCTGCGCTTGGAACCGAGGATACCTTTTGCAGGAAGTGTTCTTGCTGCGTTTGTCAGAACTATGATGAAGATAAAGATCCGAGTCTATGGATTACTTGTGAGGCTTGTGGAGTGTCTTGTCATTTAGAATGCGCTTTGGAGCAAGAGAGGTATGGGATTGGGTGTGATGATGATGAAGTAGGAAGAGCGCTTGATGGTAGGTTTTATTGCGTGTTTTGCGGCAAAGATAATGACTTACTCGGATGCTGGAGGCAACAAGTGAAGGTGGCGAAAGAGACTCAACGTGTGGATGTTCTTTGCTACCGTGTTTCTTTAGGACAGAAGCTGCTGAGAGGTACGAGGAAGTATCGATATCTGTTGGAACTCATGGACGAGGCGGTGAAGAAGCTGGAGGGTGATGTGGGTCCGTTATCGGGTTGCGCGATGAAGATGGCTCGTGGTATCGTCCAAAGTCTATCTTCGGGAACTCAAGTTCAAAAGCTGTGTTCTCTGGCAATGGAAGCTTTGGACAAAATGGTCTCACCACCATCAGAATCTGTTTCAGGACAAGGTGACAAGTTGAGCGTGAGAGTGGAAGAGGTTCAAGCAAGATCAGTCACTGTGATATTAGACTCCGAGGAGCCGTCTTCCTCACAAAACCAGACCACTGGGGTGGAGGGTGATGAAGATGAAGCTGGGAACATGCAAAGCCTATTGATTAACTCTAGCAGTGGTCTTTGCAGTAATCCATCTTTACCGGAAGATGAATTTAACAATGCCCTTATACGCTGCTGCAAAGAAAATGGGGACAATGACAACATTGAAGTAGAATCTGAGCTTGAAGACGAGAGGCTCATAAAAAGGAAAGTTAACGAGCCAGAGGGAAGAGAGTTGCTTGTTGTAACACCCTGCCGAAGAGATGCTTATAAGGGCAAGCAAGAAGGGAACAAAAGATCCAAATCAAGAACAGCAACCGTGAACGAGAAACCTGAGACCAATGTAGCAAATGGATTTGGAGGAGATAATGACTTGGTTCACGTCGTCAAGACCATCAGATGCTTAGAGCAAGAAGGGCATATAGACAAGAGTTTCCGGAAAAGGTTCTTGACATGGTATAGCTTAAGAGCTACTCATCGTGAAGTTAGAGTTGTGAAGCTTTTTATCGAGACATTCATGGATGATCTGCCCTCTTTGGGACAACAGCTTATGCATACATTCTCAGATTGCACACTCAACAAGAGATCATCAGCAAGTGGTGTTGTACCTGCTGGAATCTGCCTCAAGCTCTGGCATTAA
Protein Sequence
- >Bra020445
MQAASLSKNWRFDSTVGPEDIDPSSFQGVTCADFPKKKGLSVSERRELIHALSKQPEEASELLNSWSRDEIMKIICAEMGKERKYTGLAKPKLIETLLKLVSRPLGETSRPDRKNSKKKRKTTSYIICCENVACRAALGTEDTFCRKCSCCVCQNYDEDKDPSLWITCEACGVSCHLECALEQERYGIGCDDDEVGRALDGRFYCVFCGKDNDLLGCWRQQVKVAKETQRVDVLCYRVSLGQKLLRGTRKYRYLLELMDEAVKKLEGDVGPLSGCAMKMARGIVQSLSSGTQVQKLCSLAMEALDKMVSPPSESVSGQGDKLSVRVEEVQARSVTVILDSEEPSSSQNQTTGVEGDEDEAGNMQSLLINSSSGLCSNPSLPEDEFNNALIRCCKENGDNDNIEVESELEDERLIKRKVNEPEGRELLVVTPCRRDAYKGKQEGNKRSKSRTATVNEKPETNVANGFGGDNDLVHVVKTIRCLEQEGHIDKSFRKRFLTWYSLRATHREVRVVKLFIETFMDDLPSLGQQLMHTFSDCTLNKRSSASGVVPAGICLKLWH