Information report for Bra018060
Gene Details
Functional Annotation
- Relative of Early Flowering 6 (REF6) encodes a Jumonji N/C and zinc finger domain-containing protein that acts as a positive regulator of flowering in an FLC-dependent pathway. REF6 mutants have hyperacetylation of histone H4 at the FLC locus. REF6 interacts with BES1 in a Y2H assay and in vitro. REF6 may play a role in brassinoteroid signaling by affecting histone methylation in the promoters of BR-responsive genes. It is most closely related to the JHDM3 subfamily of JmjN/C proteins.
Homologous
- Arabidopsis thaliana — AT3G48430
Sequences
gDNA Sequence
- >Bra018060
CACTTTTTCTTGATCTTCTTAGCTGAATGACCCGTCTTCCTTTTGTGCCTGCTAAAATCTGAGACAAACCTGAATGTCTGACTACAACCCGGTTCAGCACATACATAAGGCCTCTCACCAGTGTGTACCCTTATGTGTTCCGTTCTAGACCAAGCCCACTTGAACGTCATCTTGCACCCCTTCCATGGACATTTCAGTGGACGCTCATCTGAGTGAACGCGCTGGTGCTGAACCAGATACTTGTGTGAGAAGAAGTTTTTGCCACAGCCTTTAACAGGGCAGATGTTTCTTTTATGCAGAGACAACTGTTTTTCTGAACTGAAACTCATTGTGCAACCCTCCATGTCACATTGGTACGGCAAGCATTCCTCTTGTTCATCTTCCTCCACCTCTTCTTCACTTGCGACTCCGGAGAGGGAAGAAACATTACTTCCTTTCTTACCAGTTTTCTTTGGTTTTGTCTCCAAAGACCTTCTCGGGGGCTTCAGGGTTCTCACCCTTATCCGTGTGCTAGCTTCCTCACTTTCTTCTTCATTTTCCTCCACCTCTTCTTCACTTGCAACTTCTGAGAAGGAAACATTTCTTCCCTTCTTACCAGTTTTCTTCGGCTTTGTTGCTGAAGATCCTCTCGAGGGTTTCGGGGTTCTCACCCTAAGCCGTGTGCTAGGTCCCTCCATGTATGAATCTAGCTCTTTCATCTTCTTTCTGGATCCAGACTGTAGCAAAGTGCGACCTCCTGTGTCTCCCAGACTCTGAACTATCTTGGTTTTTACTTTACGTTTAGCGATGGACCTGGTTTGCCTTTTCCCGCTACTGCAAAAGTCTTGTTCCTCCAATGAATTCTCTTCTGAATCGTACTCGTCATCCATTCGACTAGTCTGTGCATCACTTGTGAATACCCTTTCCCTTTGCTGATCTTCTGAATCATATGAAACCAGATCTCTAAAAACTTTAGTCCGTTTGCTCCTTGGAATCCCTCTAGGGTGCCTGTACATATCATTATCACCATACATTGGCTGGTCCTCTCTGTATACCTGAAAGCCATTCTCCTTCGAGCTTTCTGAAGATGCATATTCCCTCCTTACAGTATATTCTTGTCCAAGTGAACGCTCTGAAACTTCATCATCATCTGATTCAACACCCTTGAGCTGTTGCTGATCAGACATTTGATTCGACGAATCACCAGAAACCTCATTCCCCGTCTCAAAATAAGACTCTTCCTCATCCCCGTAAGCCCTCCATTGCTGCTTATAGGAATGATCCTCTGATGTGTCATCAGAAACTCCTGCTTCCCTCTTAAAAGAGGTAAGCTTCTTGCGTGGCGCAGCCTTCCCTCTCGCCTTTCTCTTCCTAGAATACTTTCTTCCGAACATTGTGGTTGCATCTCTAGAGTCATTACCATGAACAGTGACATCCTCATCCAGAGCAGCTCGCAGATGACTTCTTTCAGTTTCTTCTCCCTCAAAGTCCTCCTCCAGCAGAAAAGGATGCACCTGAAGAAAGAAAACAAAACCAGTCTTAAACTGAAGCAAACCAAGCAGAAAAGTCTGAACAAGTATGGTTTCAAGTTAATCAAATAGTGTACCTGATGCGACATCCAAACCTTACCACACCATTTTCCAGCAACATATTTCCTCTGTCTGGAAGATCTTATACCAGAAACTTGGGGAGTTGCTGGAGAGGTGCGACCGAACACATTGTAAATGACGGAGTTGTAAGGCATCTGCTTACTGTAGAGAGGAGAGCGACTGAGGATAGCACTGTGAGAAAGGTTAATACCCAACTTTACAGCCCAGTCGCTGTTCCCAGCCTTAGCTTCAACGTTTGCCAACGCCGCCTGGATCGTTTCCTCATCCTCTCGGGTCACATTCTTGAACTCAGTGTAATTCCACTCGTGGTTGACTCCAAGCTCTTTGGCAACTACCTTTCCTTCAGCCTCTATCCTGGGGTAATCTGCAAAATAGCGTGTCTTAATGATAGCAAAAGAAAACAAACAATGCCATCACTTTTTTTTCTAAACTTGTGGTTTTGCTGTTTACCTGGATGGCATAATAACATTATGTTAATCCCCCCAATAGGATGAAGTCGTTGTTCCACTTCCGCAGCATGCTCAAGACAAAACACGTGTAACCGAGAGAAGTCGTCATCAGATCTTGGAATAAATGGTAAAGTTATCTCTACAGATGATGCATTCCCGCCTTTGCTTAGATTAGCATGTGATACGTCAACCTCTTTTCCTTTCTCACATGTAAGTCCTTGGCTGTTTAAAGCAGAAGATAGACCATTTCCAGCCTCGTCGTTGCCATCTGTAACAAAAGATGATGCTTCAAGTACGCAAGCAACTTCATCCGAAACAGGATTATCTAAGCCTTTGTGATCTTCTTCCTCAGAATCAGAAGAGTCTCCATATGCTGAAGCTAACAACCCTAGAGCACCACTCTCTTTTGTTAGGGAACTTGATGAAGTTCTTTGATCAACGGTCTTCGTTGTTGAATGATACGGAGTTTGAACAGGAGCATTGTATAAGTCACCAACATCTTGCTTTCCTGTGTTTTCTGCGTCATGAAACAAAGTTATGAAACAGAGTTAACACTTTAAAGCCATTAACAGAATGAAAGACTAGTTACTTACCTGAAGGAGGCATCACTACATCCTGACCAAGGTTTCCAGATCCGGAAGCAACTGTCCAATCATTCAAGAAGCTACAATCCGCAGACATTAGATATCTAGCTGCTGCTTCTTTAGGTTGAATAATAGCAACACAATCAAAGCTCAAGACTCCACATGTAACACAAGAGAAAAGCCTCTGATCCGAAAGCCCCACAGCTCCATTATTTTTCCTCCTTTCAACATCTGTCGAAGTTCCTTGGGTTTCGTCCTCTTTGCTTGCCAGATGATCTCTGTTCCTTTCACACAAAGATGTAAACTTCTCTTTCACACCGTTACTGAGACTGACCATAACACTATCGGAACTCAAGTCTTCAGATTTTATAAGGAGTGTTGTCTGTCCCTGGTTAGCACCCAAATGAGATCCAATTCGCACGTCAGAGCAAACCGATACATCTGAGGAACTCTGCGGAAGAAGAGCTATTGGAGATCCTTTTCCAAGAGAGTGGAGCAACTCGTTGTTGTGGATAATGTTTTGCACAAACAGTTCATTAGTCAGTTTTTCTCCTTCGCTTTTTTTCTTATCTTTCAATCTAGAACTCCTTGGTTTGTTGTGGATGCTATCTGGCACTCTGCAATGAGTGACGCACACCTTATGTAAACCATTTTAAGAGTTCTATGACTAAACTTGAAGAGTGTGTGGAAAGAAGAAAGAGTACCTTGAACCTAGAGCCAATGCATAGTCATAAAGTAACTGGAGATGAGAAACCATTGGAGGGTAATTTATGGAAGCTCGCCGGATGGCTGCATCTTTTGCCATCCTCAACCATTGTGGAGTTGCAATGTTAGATGCTTCCCCAAAATTGAATCCTGCAACCCCCCAAAATTGTGTTGCAAGGTTATATTAACGCATTAAGCCTTGAATAATGAACTTGAAGATAGTGAATAAAGGTTGCTTGCTCACCATGACTAAACCCTGAGTGATATGCTCCTGGAAAGGTGATGACAAAATCTCCAGGATTTTGTACTAACCTGATACAAGCAAACCACTTGCGTGAATAAAACAGGAGAAAAAAAACTGTTTACATTCTAAACAGAGCACAAACAGAGAACCAGTACCTGCAACATGGTATCCCAGCTCTAACAAATACTTCAGGAGACATAACTGTTGTCTTCTCACCAAGAGTAGAAAATGTCACTGGTAAAACAACAATATAAAGAGGTATAACCACTTAGTTTGCTTGAATGCAGCTGCATAAGCAGTTCCAAGCAACAGAAGGAACAGAACATACAACAAAGCCAACAATCAAAACAAGAAACTGAACCACTAAGTAACTCTAAGTCACTCTAGTCTCACATAACACCAATCGACATCCACCAGATACTCGCCAAGATAAGTATTTGGTTTACTTGCGTGAAGTTACATGAACATATTCTTCAATGGTCAACTTTTAGAAACAAAGCAGACAGTTAAAAGCAACACAAATATGCTAACAATCAGAACAATGAACTGAAACTGAACTCTCAGACTCGCAGAATCTAAATAATTTAACTTTCAAAAGAAACTTGTCATCAAAAGAAGACTCTAGTTTGAAACAAAAACCGACCAAGCACCGGGCTTTACTACTGACATTTTTTTGACAAACGTAACAGAGTATCCCATAGCAAAAAGCAAATCAGTAGAAAAGAAAACTGACCAAGAGGATTAAGCTCTTCTCCATAACCATGAACCCTGACCACCTCCTCAAAGGCCATAGCAGCATCCTTTGGAACACCGTACCAAGTCTTACCAGCACCCATATGCAAGTAATTGAGACTATGGAGGTCATGGTCCTCCACATGCCAAGCAAACCAACTAAACATCATAGCGATATAAACCATGGGAGATGTGACCCCAGGGATCTCCTCTTTCATGAACTTAAGCAAAGACCCTTCAGCTCTAGCCATGGCCCTCATGTTCCAAGCAGTCTCACCAACAGTCCCACAATCACCACCAGATTCTCTCCTCCTCGCGGCTGCTAAACTCAGAGGCACAAAAGCGGACCCGGGCATGTCGTTGGCGTACTCAACGGAGAAGGGCTTATCCACCGAGGCTCTCCAGTAAAGGGTCTCGACTTCGAGCGGCGAGACGGAACCCTTCTTGCCGCACTTCTTAAGATAACTCTTCTCAAAGTTCTTAGCTTTAAACTCGAACTCATCGAAAGTGTAACGCTCACCGCTCTGCCACACGGGTCTCTGCACGGGGCGCTGCCTCCTAGGGCAAAACCCGATCTGCTGCTGACGCGTGGTGAATGTGGGACCGCCGTCGTAATCGGGCTTTCCGCCGTCGCGAGCCCTGGCCCTGGCTCGAGCGGCGAGAGAGCGGTTGAGGTTGTTAATGGCGGTTTTCTTAGAGGAAGGAGGAACGGGAGGCACAATTTTGCAGATGCCGTATCTGGAAGCTTCCTCTTCGATCTTGCAAATGTAAGCCATCGGATCTTGGAACTCTGCCAGAGTGGGTCTGAACTCTGGGGCCACTGGCAGCGATTTCAGCCATGGGAACACGTCTTGACTCTGCTCTGAAACCGCCAT
CDS Sequence
- >Bra018060
ATGGCGGTTTCAGAGCAGAGTCAAGACGTGTTCCCATGGCTGAAATCGCTGCCAGTGGCCCCAGAGTTCAGACCCACTCTGGCAGAGTTCCAAGATCCGATGGCTTACATTTGCAAGATCGAAGAGGAAGCTTCCAGATACGGCATCTGCAAAATTGTGCCTCCCGTTCCTCCTTCCTCTAAGAAAACCGCCATTAACAACCTCAACCGCTCTCTCGCCGCTCGAGCCAGGGCCAGGGCTCGCGACGGCGGAAAGCCCGATTACGACGGCGGTCCCACATTCACCACGCGTCAGCAGCAGATCGGGTTTTGCCCTAGGAGGCAGCGCCCCGTGCAGAGACCCGTGTGGCAGAGCGGTGAGCGTTACACTTTCGATGAGTTCGAGTTTAAAGCTAAGAACTTTGAGAAGAGTTATCTTAAGAAGTGCGGCAAGAAGGGTTCCGTCTCGCCGCTCGAAGTCGAGACCCTTTACTGGAGAGCCTCGGTGGATAAGCCCTTCTCCGTTGAGTACGCCAACGACATGCCCGGGTCCGCTTTTGTGCCTCTGAGTTTAGCAGCCGCGAGGAGGAGAGAATCTGGTGGTGATTGTGGGACTGTTGGTGAGACTGCTTGGAACATGAGGGCCATGGCTAGAGCTGAAGGGTCTTTGCTTAAGTTCATGAAAGAGGAGATCCCTGGGGTCACATCTCCCATGGTTTATATCGCTATGATGTTTAGTTGGTTTGCTTGGCATGTGGAGGACCATGACCTCCATAGTCTCAATTACTTGCATATGGGTGCTGGTAAGACTTGGTACGGTGTTCCAAAGGATGCTGCTATGGCCTTTGAGGAGGTGGTCAGGGTTCATGGTTATGGAGAAGAGCTTAATCCTCTTGTGACATTTTCTACTCTTGGTGAGAAGACAACAGTTATGTCTCCTGAAGTATTTGTTAGAGCTGGGATACCATGTTGCAGGTTAGTACAAAATCCTGGAGATTTTGTCATCACCTTTCCAGGAGCATATCACTCAGGGTTTAGTCATGGATTCAATTTTGGGGAAGCATCTAACATTGCAACTCCACAATGGTTGAGGATGGCAAAAGATGCAGCCATCCGGCGAGCTTCCATAAATTACCCTCCAATGGTTTCTCATCTCCAGTTACTTTATGACTATGCATTGGCTCTAGGTTCAAGAGTGCCAGATAGCATCCACAACAAACCAAGGAGTTCTAGATTGAAAGATAAGAAAAAAAGCGAAGGAGAAAAACTGACTAATGAACTGTTTGTGCAAAACATTATCCACAACAACGAGTTGCTCCACTCTCTTGGAAAAGGATCTCCAATAGCTCTTCTTCCGCAGAGTTCCTCAGATGTATCGGTTTGCTCTGACGTGCGAATTGGATCTCATTTGGGTGCTAACCAGGGACAGACAACACTCCTTATAAAATCTGAAGACTTGAGTTCCGATAGTGTTATGGTCAGTCTCAGTAACGGTGTGAAAGAGAAGTTTACATCTTTGTGTGAAAGGAACAGAGATCATCTGGCAAGCAAAGAGGACGAAACCCAAGGAACTTCGACAGATGTTGAAAGGAGGAAAAATAATGGAGCTGTGGGGCTTTCGGATCAGAGGCTTTTCTCTTGTGTTACATGTGGAGTCTTGAGCTTTGATTGTGTTGCTATTATTCAACCTAAAGAAGCAGCAGCTAGATATCTAATGTCTGCGGATTGTAGCTTCTTGAATGATTGGACAGTTGCTTCCGGATCTGGAAACCTTGGTCAGGATGTAGTGATGCCTCCTTCAGAAAACACAGGAAAGCAAGATGTTGGTGACTTATACAATGCTCCTGTTCAAACTCCGTATCATTCAACAACGAAGACCGTTGATCAAAGAACTTCATCAAGTTCCCTAACAAAAGAGAGTGGTGCTCTAGGGTTGTTAGCTTCAGCATATGGAGACTCTTCTGATTCTGAGGAAGAAGATCACAAAGGCTTAGATAATCCTGTTTCGGATGAAGTTGCTTGCGTACTTGAAGCATCATCTTTTGTTACAGATGGCAACGACGAGGCTGGAAATGGTCTATCTTCTGCTTTAAACAGCCAAGGACTTACATGTGAGAAAGGAAAAGAGGTTGACGTATCACATGCTAATCTAAGCAAAGGCGGGAATGCATCATCTGTAGAGATAACTTTACCATTTATTCCAAGATCTGATGACGACTTCTCTCGGTTACACGTGTTTTGTCTTGAGCATGCTGCGGAAGTGGAACAACGACTTCATCCTATTGGGGGGATTAACATAATGTTATTATGCCATCCAGATTACCCCAGGATAGAGGCTGAAGGAAAGGTAGTTGCCAAAGAGCTTGGAGTCAACCACGAGTGGAATTACACTGAGTTCAAGAATGTGACCCGAGAGGATGAGGAAACGATCCAGGCGGCGTTGGCAAACGTTGAAGCTAAGGCTGGGAACAGCGACTGGGCTGTAAAGTTGGGTATTAACCTTTCTCACAGTGCTATCCTCAGTCGCTCTCCTCTCTACAGTAAGCAGATGCCTTACAACTCCGTCATTTACAATGTGTTCGGTCGCACCTCTCCAGCAACTCCCCAAGTTTCTGGTATAAGATCTTCCAGACAGAGGAAATATGTTGCTGGAAAATGGTGTGGTAAGGTTTGGATGTCGCATCAGGTGCATCCTTTTCTGCTGGAGGAGGACTTTGAGGGAGAAGAAACTGAAAGAAGTCATCTGCGAGCTGCTCTGGATGAGGATGTCACTGTTCATGGTAATGACTCTAGAGATGCAACCACAATGTTCGGAAGAAAGTATTCTAGGAAGAGAAAGGCGAGAGGGAAGGCTGCGCCACGCAAGAAGCTTACCTCTTTTAAGAGGGAAGCAGGAGTTTCTGATGACACATCAGAGGATCATTCCTATAAGCAGCAATGGAGGGCTTACGGGGATGAGGAAGAGTCTTATTTTGAGACGGGGAATGAGGTTTCTGGTGATTCGTCGAATCAAATGTCTGATCAGCAACAGCTCAAGGGTGTTGAATCAGATGATGATGAAGTTTCAGAGCGTTCACTTGGACAAGAATATACTGTAAGGAGGGAATATGCATCTTCAGAAAGCTCGAAGGAGAATGGCTTTCAGGTATACAGAGAGGACCAGCCAATGTATGGTGATAATGATATGTACAGGCACCCTAGAGGGATTCCAAGGAGCAAACGGACTAAAGTTTTTAGAGATCTGGTTTCATATGATTCAGAAGATCAGCAAAGGGAAAGGGTATTCACAAGTGATGCACAGACTAGTCGAATGGATGACGAGTACGATTCAGAAGAGAATTCATTGGAGGAACAAGACTTTTGCAGTAGCGGGAAAAGGCAAACCAGGTCCATCGCTAAACGTAAAGTAAAAACCAAGATAGTTCAGAGTCTGGGAGACACAGGAGGTCGCACTTTGCTACAGTCTGGATCCAGAAAGAAGATGAAAGAGCTAGATTCATACATGGAGGGACCTAGCACACGGCTTAGGGTGAGAACCCCGAAACCCTCGAGAGGATCTTCAGCAACAAAGCCGAAGAAAACTGGTAAGAAGGGAAGAAATGTTTCCTTCTCAGAAGTTGCAAGTGAAGAAGAGGTGGAGGAAAATGAAGAAGAAAGTGAGGAAGCTAGCACACGGATAAGGGTGAGAACCCTGAAGCCCCCGAGAAGGTCTTTGGAGACAAAACCAAAGAAAACTGGTAAGAAAGGAAGTAATGTTTCTTCCCTCTCCGGAGTCGCAAGTGAAGAAGAGGTGGAGGAAGATGAACAAGAGGAATGCTTGCCGTACCAATGTGACATGGAGGGTTGCACAATGAGTTTCAGTTCAGAAAAACAGTTGTCTCTGCATAAAAGAAACATCTGCCCTGTTAAAGGCTGTGGCAAAAACTTCTTCTCACACAAGTATCTGGTTCAGCACCAGCGCGTTCACTCAGATGAGCGTCCACTGAAATGTCCATGGAAGGGGTGCAAGATGACGTTCAAGTGGGCTTGGTCTAGAACGGAACACATAAGGGTACACACTGGTGAGAGGCCTTATGTATGTGCTGAACCGGGTTGTAGTCAGACATTCAGGTTTGTCTCAGATTTTAGCAGGCACAAAAGGAAGACGGGTCATTCAGCTAAGAAGATCAAGAAAAAGTGA
Protein Sequence
- >Bra018060
MAVSEQSQDVFPWLKSLPVAPEFRPTLAEFQDPMAYICKIEEEASRYGICKIVPPVPPSSKKTAINNLNRSLAARARARARDGGKPDYDGGPTFTTRQQQIGFCPRRQRPVQRPVWQSGERYTFDEFEFKAKNFEKSYLKKCGKKGSVSPLEVETLYWRASVDKPFSVEYANDMPGSAFVPLSLAAARRRESGGDCGTVGETAWNMRAMARAEGSLLKFMKEEIPGVTSPMVYIAMMFSWFAWHVEDHDLHSLNYLHMGAGKTWYGVPKDAAMAFEEVVRVHGYGEELNPLVTFSTLGEKTTVMSPEVFVRAGIPCCRLVQNPGDFVITFPGAYHSGFSHGFNFGEASNIATPQWLRMAKDAAIRRASINYPPMVSHLQLLYDYALALGSRVPDSIHNKPRSSRLKDKKKSEGEKLTNELFVQNIIHNNELLHSLGKGSPIALLPQSSSDVSVCSDVRIGSHLGANQGQTTLLIKSEDLSSDSVMVSLSNGVKEKFTSLCERNRDHLASKEDETQGTSTDVERRKNNGAVGLSDQRLFSCVTCGVLSFDCVAIIQPKEAAARYLMSADCSFLNDWTVASGSGNLGQDVVMPPSENTGKQDVGDLYNAPVQTPYHSTTKTVDQRTSSSSLTKESGALGLLASAYGDSSDSEEEDHKGLDNPVSDEVACVLEASSFVTDGNDEAGNGLSSALNSQGLTCEKGKEVDVSHANLSKGGNASSVEITLPFIPRSDDDFSRLHVFCLEHAAEVEQRLHPIGGINIMLLCHPDYPRIEAEGKVVAKELGVNHEWNYTEFKNVTREDEETIQAALANVEAKAGNSDWAVKLGINLSHSAILSRSPLYSKQMPYNSVIYNVFGRTSPATPQVSGIRSSRQRKYVAGKWCGKVWMSHQVHPFLLEEDFEGEETERSHLRAALDEDVTVHGNDSRDATTMFGRKYSRKRKARGKAAPRKKLTSFKREAGVSDDTSEDHSYKQQWRAYGDEEESYFETGNEVSGDSSNQMSDQQQLKGVESDDDEVSERSLGQEYTVRREYASSESSKENGFQVYREDQPMYGDNDMYRHPRGIPRSKRTKVFRDLVSYDSEDQQRERVFTSDAQTSRMDDEYDSEENSLEEQDFCSSGKRQTRSIAKRKVKTKIVQSLGDTGGRTLLQSGSRKKMKELDSYMEGPSTRLRVRTPKPSRGSSATKPKKTGKKGRNVSFSEVASEEEVEENEEESEEASTRIRVRTLKPPRRSLETKPKKTGKKGSNVSSLSGVASEEEVEEDEQEECLPYQCDMEGCTMSFSSEKQLSLHKRNICPVKGCGKNFFSHKYLVQHQRVHSDERPLKCPWKGCKMTFKWAWSRTEHIRVHTGERPYVCAEPGCSQTFRFVSDFSRHKRKTGHSAKKIKKK