Information report for Bra017638
Gene Details
Functional Annotation
- MADS-box transcription factor. Expressed in leaf, root and stem, with higher RNA accumulation in guard cells and trichomes.
Homologous
- Arabidopsis thaliana: AT3G57230.1
- Brassica napus: BnaA03G0543200ZS, GSBRNA2T00092702001, BnaC07G0519400ZS, GSBRNA2T00099980001, GSBRNA2T00121299001, BnaC01G0045300ZS, GSBRNA2T00130794001
- Brassica oleracea: XP_013595734.1, Bo7g116760, XP_013620707.1, Bo1g007520
- Raphanus raphanistrum: RrC2563_p1
Gene Resources
- Pfam: PF01486 PF00319
- UniProt: A0A078IH39
- RefSeq: XP_013690063.1
- EMBL: HG994357 , LK032822
- AlphaFoldDB: A0A078IH39
- KEGG: bna:106393975 , bna:106441133
- OMA: KSELKFW
- InterPro: IPR002100 , IPR002487 , IPR033896 , IPR036879 , IPR050142
- PANTHER: PTHR48019
- SUPFAM: SSF55455
- PROSITE: PS00350 , PS50066 , PS51297
- Gene3D: 3.40.1810.10
- OrthoDB: A0A078IH39
- SMR: A0A078IH39
- CDD: cd00265
- STRING: 3708.A0A078IH39
Sequences
gDNA Sequence
- >Bra017638
CACGCAATGAAAGAAAAATAGCTTAGTTGGATAGCTTTGGAACTTGTTTCGTCATGCTGCTGGGGTTGGCTGAGCTGAAGATGGACATGTTCGCTCGAGTTACCTCCCATGTCTAGACCATTTGTGAGAAGAGAAATTTTGTCTGCGCTTTTCACACTCTCAACCTCTGAAACCTGCAAGTAGTAGCCAGATTACATTATCCTCAATTTAGAAGAAGAAAAACATTGTTAGTTTTTTGAAAGATTAATCTGCCTTCCAAACTCAAAATACCTTCTTATGTAACTCCATGTGCTGCTGGTGCATTAGGTTTACTTTCTTATGGAGCTCTAAATTCTCTTGGTGCACGAGATTACCCTGCAATCGAAAATATAAGAATTAGCAATTTGTAGGTATTAAATAATGTGGATATGCCTAATCAGAGTCCTACCTCTCGGTTCAGTTCTTTTATTTCTTCGACTAACATTTGTTCCTGCAAACGTCAATAAAAGAAAAGAGTAAGTACAACATACATGAAAAAGTTGACTTATTTGCCACAACATCTATACCTAGGCCCTATCTATACCTTTTTCATTCGTACGTCACGAAGGCTCATCTCAAGCTGATTCTCCAGTTTCTGAAGATCTTCCACACTTAGTCCAGAGAGCTCTTCACCCATCATTTGCCTATCAATTACAAGCTCTTTCCCCATCACTTTTGAATATGCAAACTTTTCTAGAGTGATTATATACCTTTCCTAATTCATCCAAACAAAAATAAAAAGAGAGATAGGGAATGTGGAAGTGTTTGGTTATTCACTTCTTGTGGATGGTCTACAACTCTAGATGTGTGGAGATATAACTCACGAGTTTGCTGAGATAACAATGGTGATTTTGGAGAAGATATCCAGCATCATGGTAACAGGTAAAGTCCTTAAGAGGTGTTAAAACAGTTTTCCATTTTATTTTTGATATCCACATTCTTTTATTGAAAAAATGCAAATGCTGGAATAGTTTTACTTTTCCGAAAAATCTTATAGCCTTTGACATTTTTAGTACATCATGTCATGTTAATATCGAGAGTGTTTGACGAACTCAGAGGATGCAAGAACATACCGGTGGTTTTCTTGCAAGTTATGTAGCTGACGCTTTAGAATCGCAGCCTCGTTTTGCCAAAACTATAATATAGCAGAATTATTTTCAGGTGACTGAAACTGAGAAAACAATTTTTTTTTTTTGCGGCATTAACATCTTATCAAGTCTAGAATGGATTCTTGAAAAAGATAATGCAACGTAATGTATGTAATCTTATGTTCAGGTGCAGCTTGAGAGGAGTCAAAAGTTGAAATAGGCTAACGAAGCTGTAACAAGCTAACATTATAAAACGCACCAAGTAACTATCTCTTTGTTTTACTATGTTACTTGTTTGGTCTATTCGTAACTCATTAGAAAATTAACTGCAGCAATTATTCGTTGAAATCCATAGAGAGGAGTAATAAACATTAAACCAAAAGAGGAATTTATCAAAAAAAAAACAAAAGAGGAATACCTTGAGTTCTGAAGCTGGGTTCATTTCCGAATTGGTGTCACATTTGGCATCTCTGTATCTCTCTATTACCGATTTCATGCTGCCATAAAAAGAAGAAGATTTAAGTTGTATATCTGCAGGAGTGAGTTTGGCAGGTAAGGTAACTAGAGCAACATCAACTGCATCATTTCTACTTACATAGTTTCGGTGACAAAACTTTTACTTAAACTACCCTAAGCCAATTTTACCTACATGGAAATTAATTCTCTGCACCAAAAATACAGATTCTCCATACTCTAAACATAACATGATGCTGCATGAAGCTTAAGTAGAGAATGAAAGAAACAAGACCAAACTTATGTACAAGTGGCCAACTCTAATCACCAAACCAGAGTTAAGTTATTATTGTTGTCAGCTGACAAATATGAACTAGTGAGACATAAATGTGTCCCTTTAGAACCATTGCCTATTCTATCTAAATCTCATGGAACCATCAACTCTTCTGGATCTACATTTATTTCTGACAATCTTTTTAGTTTTTACTCTATAGTTTATTTTCTTTTTACTTCAGTGAACTCCTTCTAAAGTAGAAAATCAGAAGGGATTTGATGATTGATATGTAAAAAGAATATACTTTTATATATAACTAAACAATGACCAAGTTGAGCATTTAAATGGAATGGTTTCTTTCCAAATTGGATAAATTAAATAGGAAAAAGATAGATTATGGATGACCACGAAAGCAAAAATGATTCCCCCACTAGTGTATTAATATATTAACCATTAGATAATGCAGCTCATTTTAGGTACATCAAACCCACCAACTAGTTGCCAATAAAGAAAAAAGTAAACAGTGAAAGAGAGACTACTCTTTTTCTAAGAAACCTCAAAACCAAACCAAAGAAGAGTTTCTTCTGCCCTTTTATACTAAATTTAGTATGGTTTTGAGAGAACACTACAAGTCCACCTTATGATCTATACACTCCACACAAATCTCTATCATTCTAGTCCTATCCAATTTACTTTTGTCCTGTCCTGCATCGAAACATACATAATATACAAACCATAAATCAAAATCTCATATTACGTTACAGAACTCATATAATCTATGACTCTTAAACACAACCGTACTGGCCTTGTTTTTTTTTCCAGCTCTCATATATGTAGATAGTCAACCAATCAAGTGATGTACAAATTTCAGCCATTGCCATAAGACTAAGATGGTGTTTATGTCTATCTTCAGTGGATTGAATTTGCAGAGAACAAAAATAGCGAAAAATCGAATTAAAAAACTGGAGATTTATGATTGGTTTGTGGTCAATAAACCGTCGGTGGATCATGGATGGAGTAATCAATAGCATCAAAAATTCAACCAAAGAGATAACAAGTGATACCTGGAGCTGGAGAAATCGTAGAGCCTGCCAGTACTAGAGAAGATGATAACACCAACTTCAGCATCGCAAAGAATCGCAAGCTCCTTGGCTTTCTTCAACAAGCCGTTCCTTCTCTTGGAGAAAGTCACCTGACGACTCGTCGAGTTATCGATCCTCTTAATCGCGATCTTTCCCCTTCCCAT
CDS Sequence
- >Bra017638
ATGGGAAGGGGAAAGATCGCGATTAAGAGGATCGATAACTCGACGAGTCGTCAGGTGACTTTCTCCAAGAGAAGGAACGGCTTGTTGAAGAAAGCCAAGGAGCTTGCGATTCTTTGCGATGCTGAAGTTGGTGTTATCATCTTCTCTAGTACTGGCAGGCTCTACGATTTCTCCAGCTCCAGCATGAAATCGGTAATAGAGAGATACAGAGATGCCAAATGTGACACCAATTCGGAAATGAACCCAGCTTCAGAACTCAAGTTTTGGCAAAACGAGGCTGCGATTCTAAAGCGTCAGCTACATAACTTGCAAGAAAACCACCGGCAAATGATGGGTGAAGAGCTCTCTGGACTAAGTGTGGAAGATCTTCAGAAACTGGAGAATCAGCTTGAGATGAGCCTTCGTGACGTACGAATGAAAAAGGAACAAATGTTAGTCGAAGAAATAAAAGAACTGAACCGAGAGGGTAATCTCGTGCACCAAGAGAATTTAGAGCTCCATAAGAAAGTAAACCTAATGCACCAGCAGCACATGGAGTTACATAAGAAGGTTTCAGAGGTTGAGAGTGTGAAAAGCGCAGACAAAATTTCTCTTCTCACAAATGGTCTAGACATGGGAGGTAACTCGAGCGAACATGTCCATCTTCAGCTCAGCCAACCCCAGCAGCATGACGAAACAAGTTCCAAAGCTATCCAACTAAGCTATTTTTCTTTCATTGCGTGA
Protein Sequence
- >Bra017638
MGRGKIAIKRIDNSTSRQVTFSKRRNGLLKKAKELAILCDAEVGVIIFSSTGRLYDFSSSSMKSVIERYRDAKCDTNSEMNPASELKFWQNEAAILKRQLHNLQENHRQMMGEELSGLSVEDLQKLENQLEMSLRDVRMKKEQMLVEEIKELNREGNLVHQENLELHKKVNLMHQQHMELHKKVSEVESVKSADKISLLTNGLDMGGNSSEHVHLQLSQPQQHDETSSKAIQLSYFSFIA