Information report for Bra008446
Gene Details
Functional Annotation
- Mutant has early-flowering phenotype, encodes a putative nucleoporin. Required for the activation of downstream defense pathways by the snc1 mutation. Involved in basal resistance against bacterial pathogens.
Homologous
- Arabidopsis thaliana — AT1G80680
Sequences
gDNA Sequence
- >Bra008446
TAAGCTGATGTTTGGTGGCCTGTCTCTGAGAGATATAGAGAGAAGAGAGAGACAGCATCTTGCAGATGAGATGATCTTACATCTTCTGGTAATGGAGCTTTGAAGGCTGTCATAAAACAGCTTAGCTGAGAGTCTCTATCAGGATACACACTCAGACCTGACAGAAGCAACTCGCAGATTTCCTCTGCCATCTTTGTGTATGCGACTCTGCAGCCATACCAAGAGAGTTTGTACGTTAAGTGTAGTGTGTTGTAAGTTGTAACCAAATTTAATAAAATGCTTTTTGTGAATCAATTTAGAATGTGTGTGAGATGTTTGACCCGTATCTGTCCACACAGCAAACTTGAGCTATGTAGTCATCAGAAGCCAACTGCCTTAGTTTAGGAGCCATTACTATGGATGCCACCAAATTTAGAAGGATCCATCCAAAACTGCTCCATTATGTATTACTTTCTAGGTTATTAATATGTAAGACGAGGTCTACCTAGTAGGATCTTATACAATCCAGTGGAAAATATGAATGAACAAGGACCAAACAAGTGCATGCAAGTAGTGACTAGTTCTTAAGCTACGGGCAAGTGTGAGATATATGGAGTACGTACCTGGCTTCAACCGGTAATCTATCACCCCAAACAGCCAATGACTCGTTTAAACGACCGACAAAACTTCTGCACGACTCGTTTCTGCTCTCAGGGGAATCCTGCCGAAGCAAAAGTTGTGTTGTTCATGTCATGCATGTAATTCACACATCAAGATAACGATCATCATCATGTCCACGAGCATATGGAATTGAAAGCAATTTCGTTGAGTATCAGTACAAGATTTAAGCAGCTGCCTAACTAAAGTTTAAGCAATTTGAGAGCTCTACGAGTTGAATCTCAAATATAAAGATTATTACGACATAGACGTACCAGTTCTAGCATTGTATCAGCATCTTCTTCCAGTGAACTCTTTAGTAAATAAAATGACATGTAAATCCCAGCACCCAGGTCCCAGTTTTCAATCTCAGACTTGCGGTCGTCCATTGAAGTAGCAATTCTCCATATTTCTGAGTGGTTAGCTGCATTTATTAAAGATAAAACAGATCAATCCAAACAGATCGTTCCTACACTACACCGGAATCGTGTTCCAGTTGAGCAATTGGGTCTGCACCATAAGGAAATGAAGAAGCTTACCTGACAAAAACAATGAATGAGCAACTGATGTCATAAAAATGGAATGAGCTCTTTGCCAGTTAGCGCATTCGATAAAGTGGTCGAGAGCCTTTACGAAATCTCCATGGTAATTGTAATAAACTGCCTGCAACAAAGGAAAAAACAACCCAGCACTCAGCATATTATTATGCCCACGAGTACCTATAGCAAAAGTAGAAAGCAAGGCTTTTGTTTATTGTCCTTACCAGAGCTTCGTGCATCCATACAGAAGGGATACCCAAGTCCTTTATAAATTGCCGCTGTGATTCCACAGAACTCCAAGTTTCACAGAACTGAAACAGGATTTCCCGAATGACAGTGAAGTGTAGATATGGACGGTCTTTGCGGTAGGGCATGTGAAGAACAACGTAGATAGCCCAATGACAAAGGCCCTGAGAGAGAAGCTGTGCAACAAATCCCATATCGAGAGCATGAAGGTCATCTGAAGTGAAAGCTCCAACTGCTTCTAAGATTCCTCGCTGGTGCCAGATCATATGATAGTCAAGTGGGTCGTCAGTTGAAGAGAAGGCACTGAACATAGTCTTCAGAAAACCAATTTTTCCCTCTTCTCTGCTGTGCAAAAGCATAAGATAATACAACATGTCAGAATGCTTGGTGTTGCTTACAATTCCATCTGCTGGTCCTTCATCAATATATATTGGGACTGGCCACGGAGCCTTTCCCTGATCTAGTAGGAGTTGATAATTTCTGAAGATGACAGGCAAGGAACTGTCTGGAGCCAGATGATGCCACATCAACAACCCTAGGAATCTCTTCCAGTCAATTGCAAAATCTTGTAGTGCATCGTGGATGTTACCAGCAAGCAATTCGTAAAGCTTAATTCTATCCTTTTCAATGTAGTTAAAATCCAGCCCATTCCTTCCCCAAAGGTGAAGCTGCTGCATGATATCATCGCGGTTTACAGTTGATCCACCAACCTGGCTCAACAAACAAGCAAGTCTAACATCTCCCTTAGATATGGCAAGTTCCACAGCAGAATCAAGCTCTCGTCCCGTTAGAAGAAAGAACAAGTGCTTAAGGTAGCCAGAACCAATTAGATCACTCACGTCTTCTTGTACACGGTGACTGACACATTCTTGGAGCCAGCAACTGAATTCTGCTCTTCGGATAAGTGGAAGAGCTTCTGCATTAACTTCCGCAGACTCTTCTTTGACATCTTGCATCATGTCTTCATCATTATCAGAAGCTGCATAAGTACTCTGTCTCTCAGAAAAGAGAACTTTTATGAGTTCCCACACCATGACCTGGTGAGTCAAAAAGAGCTTAGCAGAGTTGGACAACCCAGGAAACTCCAGCTGTTTCTCGATTATATCAATATAGTTTCGGCAGATATCTGAAAGAATCACACGATCAGTGACAACTTTCTGAAGTTTAAGACTGAAAGAGCCAAACCTGACTTCTTTTTCTTCTTCATGATACAATTCCTTGTGGAGACTTAAGGGAGTCTCAAATGCAGAGTCAATAAGTTCTTTCTGAACCTTTTCCTTTTTATCCCGAACCACCTTGTCAACTGCTATCTTATCTACACTGATCACAGAAGACAATACTCTCTGGGAACTAGAACTGCCTATTGGATTACCAGTGTGAAGAAGCACGCCATTTGGTCCCCAACCTGCTCGGAACGACCTTCCCATGAATAATGCTGCATCTACAACATTGCGGGAATAGTTATCAGTTAATGGCGTCTCATGGCTGATGTCCAGCTCGAAACCTCCCATCTTCGACTTTCTGACTGCCAGGTTCTTATTTTGTTGGACCATCAGGATACTGCCTGGGGAGCTTTTATCATTCCCAGGGTTATACTCCAGCAAAGCAAGTGCGTTTTCCGCACAACCGGTAGAGTATCTTGATGAGTATCTCTTTGAGAATGTTTCTGTGAAGTTCTTGCCCTTCGTTTAGTCAATGATGTCATGGGGAAAGAAGTTTGCTCTCCAAACTCCTCACTTTCGTCAAGAACTTCATTAGGAAACATCAGCATTCTCATTTCTTTCATCTTTCCAGGATCAAGTCCTAGATGGGCTGGAAGAGAATGAGAAAGCTCAGACTCAGAAGTTTCCATTTTATCAACGTCAGCTACCACCATGTCACCATTCAGTGCCACATGATTCTCCAAACGTGGGGCATCATCCATAGTAATATCTTCTGCCTCATCATCACTCAACCCAAATCTGCTGAAATGAGGAACCAAAAACTTCCAGAAACCCATCTCACGAACAAACGAGATGAAAGTTGCCCCTTGTCTTTCAGTAATCTGTTTTAATTTATAAGAAACATAGCCAGCCCGCTCTTCCCCACGAGCTATGTTAACGATCAGAGTGACCTCAGCAGGCTTGTTAAGCCCCTCGCCAAAAGCAGGCTTGGAGCTCTCATCATCATAAACAACCACCTCGTGCCTCTGAAACTTAACAATCTGATCCAGGTCTAAGTTTCTAACATCTGTACTTCCAAGAAACTTGATAAAACCGTAACCAATCCTCCCAATGGTGAAATCAGGAACCCGGCTGCAAAAACCAGGGCTTTCAATTTCTCGCTGGACCAGCTCGTTCATGGAAGGCTTCAAGAAGTAGCCGGGTGAGTTCAAGGAAGGCAATGAATCTCTGATATCATTTCCATCAAAAAGGATCTTTCGTGAGTCCAAACTTGTAGCCAT
CDS Sequence
- >Bra008446
ATGGCTACAAGTTTGGACTCACGAAAGATCCTTTTTGATGGAAATGATATCAGAGATTCATTGCCTTCCTTGAACTCACCCGGCTACTTCTTGAAGCCTTCCATGAACGAGCTGGTCCAGCGAGAAATTGAAAGCCCTGGTTTTTGCAGCCGGGTTCCTGATTTCACCATTGGGAGGATTGGTTACGGTTTTATCAAGTTTCTTGGAAGTACAGATGTTAGAAACTTAGACCTGGATCAGATTGTTAAGTTTCAGAGGCACGAGGTGGTTGTTTATGATGATGAGAGCTCCAAGCCTGCTTTTGGCGAGGGGCTTAACAAGCCTGCTGAGGTCACTCTGATCGTTAACATAGCTCGTGGGGAAGAGCGGGCTGGCTATGTTTCTTATAAATTAAAACAGATTACTGAAAGACAAGGGGCAACTTTCATCTCGTTTGTTCGTGAGATGGGTTTCTGGAAGTTTTTGGTTCCTCATTTCAGCAGATTTGGGTTGAGTGATGATGAGGCAGAAGATATTACTATGGATGATGCCCCACGTTTGGAGAATCATGTGGCACTGAATGGTGACATGGTGGTAGCTGACGTTGATAAAATGGAAACTTCTGAGTCTGAGCTTTCTCATTCTCTTCCAGCCCATCTAGGACTTGATCCTGGAAAGATGAAAGAAATGAGAATGCTGATGTTTCCTAATGAAGTTCTTGACGAAAAAACATTCTCAAAGAGATACTCATCAAGATACTCTACCGGTTGTGCGGAAAACGCACTTGCTTTGCTGGAGTATAACCCTGGGAATGATAAAAGCTCCCCAGGCAGTATCCTGATGGTCCAACAAAATAAGAACCTGGCAGTCAGAAAGTCGAAGATGGGAGGTTTCGAGCTGGACATCAGCCATGAGACGCCATTAACTGATAACTATTCCCGCAATGTTGTAGATGCAGCATTATTCATGGGAAGGTCGTTCCGAGCAGGTTGGGGACCAAATGGCGTGCTTCTTCACACTGGTAATCCAATAGGCAGTTCTAGTTCCCAGAGAGTATTGTCTTCTGTGATCAGTGTAGATAAGATAGCAGTTGACAAGGTGGTTCGGGATAAAAAGGAAAAGGTTCAGAAAGAACTTATTGACTCTGCATTTGAGACTCCCTTAAGTCTCCACAAGGAATTGTATCATGAAGAAGAAAAAGAAGTCAGGTTTGGCTCTTTCAGTCTTAAACTTCAGAAAGTTGTCACTGATCGTGTGATTCTTTCAGATATCTGCCGAAACTATATTGATATAATCGAGAAACAGCTGGAGTTTCCTGGGTTGTCCAACTCTGCTAAGCTCTTTTTGACTCACCAGGTCATGGTGTGGGAACTCATAAAAGTTCTCTTTTCTGAGAGACAGAGTACTTATGCAGCTTCTGATAATGATGAAGACATGATGCAAGATGTCAAAGAAGAGTCTGCGGAAGTTAATGCAGAAGCTCTTCCACTTATCCGAAGAGCAGAATTCAGTTGCTGGCTCCAAGAATGTGTCAGTCACCGTGTACAAGAAGACGTGAGTGATCTAATTGGTTCTGGCTACCTTAAGCACTTGTTCTTTCTTCTAACGGGACGAGAGCTTGATTCTGCTGTGGAACTTGCCATATCTAAGGGAGATGTTAGACTTGCTTGTTTGTTGAGCCAGGTTGGTGGATCAACTGTAAACCGCGATGATATCATGCAGCAGCTTCACCTTTGGGGAAGGAATGGGCTGGATTTTAACTACATTGAAAAGGATAGAATTAAGCTTTACGAATTGCTTGCTGGTAACATCCACGATGCACTACAAGATTTTGCAATTGACTGGAAGAGATTCCTAGGGTTGTTGATGTGGCATCATCTGGCTCCAGACAGTTCCTTGCCTGTCATCTTCAGAAATTATCAACTCCTACTAGATCAGGGAAAGGCTCCGTGGCCAGTCCCAATATATATTGATGAAGGACCAGCAGATGGAATTGTAAGCAACACCAAGCATTCTGACATGTTGTATTATCTTATGCTTTTGCACAGCAGAGAAGAGGGAAAAATTGGTTTTCTGAAGACTATGTTCAGTGCCTTCTCTTCAACTGACGACCCACTTGACTATCATATGATCTGGCACCAGCGAGGAATCTTAGAAGCAGTTGGAGCTTTCACTTCAGATGACCTTCATGCTCTCGATATGGGATTTGTTGCACAGCTTCTCTCTCAGGGCCTTTGTCATTGGGCTATCTACGTTGTTCTTCACATGCCCTACCGCAAAGACCGTCCATATCTACACTTCACTGTCATTCGGGAAATCCTGTTTCAGTTCTGTGAAACTTGGAGTTCTGTGGAATCACAGCGGCAATTTATAAAGGACTTGGGTATCCCTTCTGTATGGATGCACGAAGCTCTGGCAGTTTATTACAATTACCATGGAGATTTCGTAAAGGCTCTCGACCACTTTATCGAATGCGCTAACTGGCAAAGAGCTCATTCCATTTTTATGACATCAGTTGCTCATTCATTGTTTTTGTCAGCTAACCACTCAGAAATATGGAGAATTGCTACTTCAATGGACGACCGCAAGTCTGAGATTGAAAACTGGGACCTGGGTGCTGGGATTTACATGTCATTTTATTTACTAAAGAGTTCACTGGAAGAAGATGCTGATACAATGCTAGAACTGGATTCCCCTGAGAGCAGAAACGAGTCGTGCAGAAGTTTTGTCGGTCGTTTAAACGAGTCATTGGCTGTTTGGGGTGATAGATTACCGGTTGAAGCCAGAGTCGCATACACAAAGATGGCAGAGGAAATCTGCGAGTTGCTTCTGTCAGGTCTGAGTGTGTATCCTGATAGAGACTCTCAGCTAAGCTGTTTTATGACAGCCTTCAAAGCTCCATTACCAGAAGATGTAAGATCATCTCATCTGCAAGATGCTGTCTCTCTCTTCTCTCTATATCTCTCAGAGACAGGCCACCAAACATCAGCTTAG
Protein Sequence
- >Bra008446
MATSLDSRKILFDGNDIRDSLPSLNSPGYFLKPSMNELVQREIESPGFCSRVPDFTIGRIGYGFIKFLGSTDVRNLDLDQIVKFQRHEVVVYDDESSKPAFGEGLNKPAEVTLIVNIARGEERAGYVSYKLKQITERQGATFISFVREMGFWKFLVPHFSRFGLSDDEAEDITMDDAPRLENHVALNGDMVVADVDKMETSESELSHSLPAHLGLDPGKMKEMRMLMFPNEVLDEKTFSKRYSSRYSTGCAENALALLEYNPGNDKSSPGSILMVQQNKNLAVRKSKMGGFELDISHETPLTDNYSRNVVDAALFMGRSFRAGWGPNGVLLHTGNPIGSSSSQRVLSSVISVDKIAVDKVVRDKKEKVQKELIDSAFETPLSLHKELYHEEEKEVRFGSFSLKLQKVVTDRVILSDICRNYIDIIEKQLEFPGLSNSAKLFLTHQVMVWELIKVLFSERQSTYAASDNDEDMMQDVKEESAEVNAEALPLIRRAEFSCWLQECVSHRVQEDVSDLIGSGYLKHLFFLLTGRELDSAVELAISKGDVRLACLLSQVGGSTVNRDDIMQQLHLWGRNGLDFNYIEKDRIKLYELLAGNIHDALQDFAIDWKRFLGLLMWHHLAPDSSLPVIFRNYQLLLDQGKAPWPVPIYIDEGPADGIVSNTKHSDMLYYLMLLHSREEGKIGFLKTMFSAFSSTDDPLDYHMIWHQRGILEAVGAFTSDDLHALDMGFVAQLLSQGLCHWAIYVVLHMPYRKDRPYLHFTVIREILFQFCETWSSVESQRQFIKDLGIPSVWMHEALAVYYNYHGDFVKALDHFIECANWQRAHSIFMTSVAHSLFLSANHSEIWRIATSMDDRKSEIENWDLGAGIYMSFYLLKSSLEEDADTMLELDSPESRNESCRSFVGRLNESLAVWGDRLPVEARVAYTKMAEEICELLLSGLSVYPDRDSQLSCFMTAFKAPLPEDVRSSHLQDAVSLFSLYLSETGHQTSA