Information report for Bra008446
Gene Details
Functional Annotation
- Mutant has early-flowering phenotype, encodes a putative nucleoporin. Required for the activation of downstream defense pathways by the snc1 mutation. Involved in basal resistance against bacterial pathogens.
Homologous
- Actinidia chinensis: CEY00_Acc29548
- Brassica napus: BnaC02G0324200ZS, BnaA02G0240800ZS, BnaA07G0227600ZS, BnaC06G0245400ZS
- Brassica oleracea: Bo2g095740, Bo6g080590
- Gossypium hirsutum: Gohir.A10G069101, Gohir.D10G082300
- Manihot esculenta: MANES_04G104700
- Populus trichocarpa: POPTR_003G180100v3
- Prunus avium: Pav_sc0000663.1_g240.1.mk
- Prunus persica: PRUPE_2G099100
Sequences
gDNA Sequence
- >Bra008446
TAAGCTGATGTTTGGTGGCCTGTCTCTGAGAGATATAGAGAGAAGAGAGAGACAGCATCTTGCAGATGAGATGATCTTACATCTTCTGGTAATGGAGCTTTGAAGGCTGTCATAAAACAGCTTAGCTGAGAGTCTCTATCAGGATACACACTCAGACCTGACAGAAGCAACTCGCAGATTTCCTCTGCCATCTTTGTGTATGCGACTCTGCAGCCATACCAAGAGAGTTTGTACGTTAAGTGTAGTGTGTTGTAAGTTGTAACCAAATTTAATAAAATGCTTTTTGTGAATCAATTTAGAATGTGTGTGAGATGTTTGACCCGTATCTGTCCACACAGCAAACTTGAGCTATGTAGTCATCAGAAGCCAACTGCCTTAGTTTAGGAGCCATTACTATGGATGCCACCAAATTTAGAAGGATCCATCCAAAACTGCTCCATTATGTATTACTTTCTAGGTTATTAATATGTAAGACGAGGTCTACCTAGTAGGATCTTATACAATCCAGTGGAAAATATGAATGAACAAGGACCAAACAAGTGCATGCAAGTAGTGACTAGTTCTTAAGCTACGGGCAAGTGTGAGATATATGGAGTACGTACCTGGCTTCAACCGGTAATCTATCACCCCAAACAGCCAATGACTCGTTTAAACGACCGACAAAACTTCTGCACGACTCGTTTCTGCTCTCAGGGGAATCCTGCCGAAGCAAAAGTTGTGTTGTTCATGTCATGCATGTAATTCACACATCAAGATAACGATCATCATCATGTCCACGAGCATATGGAATTGAAAGCAATTTCGTTGAGTATCAGTACAAGATTTAAGCAGCTGCCTAACTAAAGTTTAAGCAATTTGAGAGCTCTACGAGTTGAATCTCAAATATAAAGATTATTACGACATAGACGTACCAGTTCTAGCATTGTATCAGCATCTTCTTCCAGTGAACTCTTTAGTAAATAAAATGACATGTAAATCCCAGCACCCAGGTCCCAGTTTTCAATCTCAGACTTGCGGTCGTCCATTGAAGTAGCAATTCTCCATATTTCTGAGTGGTTAGCTGCATTTATTAAAGATAAAACAGATCAATCCAAACAGATCGTTCCTACACTACACCGGAATCGTGTTCCAGTTGAGCAATTGGGTCTGCACCATAAGGAAATGAAGAAGCTTACCTGACAAAAACAATGAATGAGCAACTGATGTCATAAAAATGGAATGAGCTCTTTGCCAGTTAGCGCATTCGATAAAGTGGTCGAGAGCCTTTACGAAATCTCCATGGTAATTGTAATAAACTGCCTGCAACAAAGGAAAAAACAACCCAGCACTCAGCATATTATTATGCCCACGAGTACCTATAGCAAAAGTAGAAAGCAAGGCTTTTGTTTATTGTCCTTACCAGAGCTTCGTGCATCCATACAGAAGGGATACCCAAGTCCTTTATAAATTGCCGCTGTGATTCCACAGAACTCCAAGTTTCACAGAACTGAAACAGGATTTCCCGAATGACAGTGAAGTGTAGATATGGACGGTCTTTGCGGTAGGGCATGTGAAGAACAACGTAGATAGCCCAATGACAAAGGCCCTGAGAGAGAAGCTGTGCAACAAATCCCATATCGAGAGCATGAAGGTCATCTGAAGTGAAAGCTCCAACTGCTTCTAAGATTCCTCGCTGGTGCCAGATCATATGATAGTCAAGTGGGTCGTCAGTTGAAGAGAAGGCACTGAACATAGTCTTCAGAAAACCAATTTTTCCCTCTTCTCTGCTGTGCAAAAGCATAAGATAATACAACATGTCAGAATGCTTGGTGTTGCTTACAATTCCATCTGCTGGTCCTTCATCAATATATATTGGGACTGGCCACGGAGCCTTTCCCTGATCTAGTAGGAGTTGATAATTTCTGAAGATGACAGGCAAGGAACTGTCTGGAGCCAGATGATGCCACATCAACAACCCTAGGAATCTCTTCCAGTCAATTGCAAAATCTTGTAGTGCATCGTGGATGTTACCAGCAAGCAATTCGTAAAGCTTAATTCTATCCTTTTCAATGTAGTTAAAATCCAGCCCATTCCTTCCCCAAAGGTGAAGCTGCTGCATGATATCATCGCGGTTTACAGTTGATCCACCAACCTGGCTCAACAAACAAGCAAGTCTAACATCTCCCTTAGATATGGCAAGTTCCACAGCAGAATCAAGCTCTCGTCCCGTTAGAAGAAAGAACAAGTGCTTAAGGTAGCCAGAACCAATTAGATCACTCACGTCTTCTTGTACACGGTGACTGACACATTCTTGGAGCCAGCAACTGAATTCTGCTCTTCGGATAAGTGGAAGAGCTTCTGCATTAACTTCCGCAGACTCTTCTTTGACATCTTGCATCATGTCTTCATCATTATCAGAAGCTGCATAAGTACTCTGTCTCTCAGAAAAGAGAACTTTTATGAGTTCCCACACCATGACCTGGTGAGTCAAAAAGAGCTTAGCAGAGTTGGACAACCCAGGAAACTCCAGCTGTTTCTCGATTATATCAATATAGTTTCGGCAGATATCTGAAAGAATCACACGATCAGTGACAACTTTCTGAAGTTTAAGACTGAAAGAGCCAAACCTGACTTCTTTTTCTTCTTCATGATACAATTCCTTGTGGAGACTTAAGGGAGTCTCAAATGCAGAGTCAATAAGTTCTTTCTGAACCTTTTCCTTTTTATCCCGAACCACCTTGTCAACTGCTATCTTATCTACACTGATCACAGAAGACAATACTCTCTGGGAACTAGAACTGCCTATTGGATTACCAGTGTGAAGAAGCACGCCATTTGGTCCCCAACCTGCTCGGAACGACCTTCCCATGAATAATGCTGCATCTACAACATTGCGGGAATAGTTATCAGTTAATGGCGTCTCATGGCTGATGTCCAGCTCGAAACCTCCCATCTTCGACTTTCTGACTGCCAGGTTCTTATTTTGTTGGACCATCAGGATACTGCCTGGGGAGCTTTTATCATTCCCAGGGTTATACTCCAGCAAAGCAAGTGCGTTTTCCGCACAACCGGTAGAGTATCTTGATGAGTATCTCTTTGAGAATGTTTCTGTGAAGTTCTTGCCCTTCGTTTAGTCAATGATGTCATGGGGAAAGAAGTTTGCTCTCCAAACTCCTCACTTTCGTCAAGAACTTCATTAGGAAACATCAGCATTCTCATTTCTTTCATCTTTCCAGGATCAAGTCCTAGATGGGCTGGAAGAGAATGAGAAAGCTCAGACTCAGAAGTTTCCATTTTATCAACGTCAGCTACCACCATGTCACCATTCAGTGCCACATGATTCTCCAAACGTGGGGCATCATCCATAGTAATATCTTCTGCCTCATCATCACTCAACCCAAATCTGCTGAAATGAGGAACCAAAAACTTCCAGAAACCCATCTCACGAACAAACGAGATGAAAGTTGCCCCTTGTCTTTCAGTAATCTGTTTTAATTTATAAGAAACATAGCCAGCCCGCTCTTCCCCACGAGCTATGTTAACGATCAGAGTGACCTCAGCAGGCTTGTTAAGCCCCTCGCCAAAAGCAGGCTTGGAGCTCTCATCATCATAAACAACCACCTCGTGCCTCTGAAACTTAACAATCTGATCCAGGTCTAAGTTTCTAACATCTGTACTTCCAAGAAACTTGATAAAACCGTAACCAATCCTCCCAATGGTGAAATCAGGAACCCGGCTGCAAAAACCAGGGCTTTCAATTTCTCGCTGGACCAGCTCGTTCATGGAAGGCTTCAAGAAGTAGCCGGGTGAGTTCAAGGAAGGCAATGAATCTCTGATATCATTTCCATCAAAAAGGATCTTTCGTGAGTCCAAACTTGTAGCCAT
CDS Sequence
- >Bra008446
ATGGCTACAAGTTTGGACTCACGAAAGATCCTTTTTGATGGAAATGATATCAGAGATTCATTGCCTTCCTTGAACTCACCCGGCTACTTCTTGAAGCCTTCCATGAACGAGCTGGTCCAGCGAGAAATTGAAAGCCCTGGTTTTTGCAGCCGGGTTCCTGATTTCACCATTGGGAGGATTGGTTACGGTTTTATCAAGTTTCTTGGAAGTACAGATGTTAGAAACTTAGACCTGGATCAGATTGTTAAGTTTCAGAGGCACGAGGTGGTTGTTTATGATGATGAGAGCTCCAAGCCTGCTTTTGGCGAGGGGCTTAACAAGCCTGCTGAGGTCACTCTGATCGTTAACATAGCTCGTGGGGAAGAGCGGGCTGGCTATGTTTCTTATAAATTAAAACAGATTACTGAAAGACAAGGGGCAACTTTCATCTCGTTTGTTCGTGAGATGGGTTTCTGGAAGTTTTTGGTTCCTCATTTCAGCAGATTTGGGTTGAGTGATGATGAGGCAGAAGATATTACTATGGATGATGCCCCACGTTTGGAGAATCATGTGGCACTGAATGGTGACATGGTGGTAGCTGACGTTGATAAAATGGAAACTTCTGAGTCTGAGCTTTCTCATTCTCTTCCAGCCCATCTAGGACTTGATCCTGGAAAGATGAAAGAAATGAGAATGCTGATGTTTCCTAATGAAGTTCTTGACGAAAAAACATTCTCAAAGAGATACTCATCAAGATACTCTACCGGTTGTGCGGAAAACGCACTTGCTTTGCTGGAGTATAACCCTGGGAATGATAAAAGCTCCCCAGGCAGTATCCTGATGGTCCAACAAAATAAGAACCTGGCAGTCAGAAAGTCGAAGATGGGAGGTTTCGAGCTGGACATCAGCCATGAGACGCCATTAACTGATAACTATTCCCGCAATGTTGTAGATGCAGCATTATTCATGGGAAGGTCGTTCCGAGCAGGTTGGGGACCAAATGGCGTGCTTCTTCACACTGGTAATCCAATAGGCAGTTCTAGTTCCCAGAGAGTATTGTCTTCTGTGATCAGTGTAGATAAGATAGCAGTTGACAAGGTGGTTCGGGATAAAAAGGAAAAGGTTCAGAAAGAACTTATTGACTCTGCATTTGAGACTCCCTTAAGTCTCCACAAGGAATTGTATCATGAAGAAGAAAAAGAAGTCAGGTTTGGCTCTTTCAGTCTTAAACTTCAGAAAGTTGTCACTGATCGTGTGATTCTTTCAGATATCTGCCGAAACTATATTGATATAATCGAGAAACAGCTGGAGTTTCCTGGGTTGTCCAACTCTGCTAAGCTCTTTTTGACTCACCAGGTCATGGTGTGGGAACTCATAAAAGTTCTCTTTTCTGAGAGACAGAGTACTTATGCAGCTTCTGATAATGATGAAGACATGATGCAAGATGTCAAAGAAGAGTCTGCGGAAGTTAATGCAGAAGCTCTTCCACTTATCCGAAGAGCAGAATTCAGTTGCTGGCTCCAAGAATGTGTCAGTCACCGTGTACAAGAAGACGTGAGTGATCTAATTGGTTCTGGCTACCTTAAGCACTTGTTCTTTCTTCTAACGGGACGAGAGCTTGATTCTGCTGTGGAACTTGCCATATCTAAGGGAGATGTTAGACTTGCTTGTTTGTTGAGCCAGGTTGGTGGATCAACTGTAAACCGCGATGATATCATGCAGCAGCTTCACCTTTGGGGAAGGAATGGGCTGGATTTTAACTACATTGAAAAGGATAGAATTAAGCTTTACGAATTGCTTGCTGGTAACATCCACGATGCACTACAAGATTTTGCAATTGACTGGAAGAGATTCCTAGGGTTGTTGATGTGGCATCATCTGGCTCCAGACAGTTCCTTGCCTGTCATCTTCAGAAATTATCAACTCCTACTAGATCAGGGAAAGGCTCCGTGGCCAGTCCCAATATATATTGATGAAGGACCAGCAGATGGAATTGTAAGCAACACCAAGCATTCTGACATGTTGTATTATCTTATGCTTTTGCACAGCAGAGAAGAGGGAAAAATTGGTTTTCTGAAGACTATGTTCAGTGCCTTCTCTTCAACTGACGACCCACTTGACTATCATATGATCTGGCACCAGCGAGGAATCTTAGAAGCAGTTGGAGCTTTCACTTCAGATGACCTTCATGCTCTCGATATGGGATTTGTTGCACAGCTTCTCTCTCAGGGCCTTTGTCATTGGGCTATCTACGTTGTTCTTCACATGCCCTACCGCAAAGACCGTCCATATCTACACTTCACTGTCATTCGGGAAATCCTGTTTCAGTTCTGTGAAACTTGGAGTTCTGTGGAATCACAGCGGCAATTTATAAAGGACTTGGGTATCCCTTCTGTATGGATGCACGAAGCTCTGGCAGTTTATTACAATTACCATGGAGATTTCGTAAAGGCTCTCGACCACTTTATCGAATGCGCTAACTGGCAAAGAGCTCATTCCATTTTTATGACATCAGTTGCTCATTCATTGTTTTTGTCAGCTAACCACTCAGAAATATGGAGAATTGCTACTTCAATGGACGACCGCAAGTCTGAGATTGAAAACTGGGACCTGGGTGCTGGGATTTACATGTCATTTTATTTACTAAAGAGTTCACTGGAAGAAGATGCTGATACAATGCTAGAACTGGATTCCCCTGAGAGCAGAAACGAGTCGTGCAGAAGTTTTGTCGGTCGTTTAAACGAGTCATTGGCTGTTTGGGGTGATAGATTACCGGTTGAAGCCAGAGTCGCATACACAAAGATGGCAGAGGAAATCTGCGAGTTGCTTCTGTCAGGTCTGAGTGTGTATCCTGATAGAGACTCTCAGCTAAGCTGTTTTATGACAGCCTTCAAAGCTCCATTACCAGAAGATGTAAGATCATCTCATCTGCAAGATGCTGTCTCTCTCTTCTCTCTATATCTCTCAGAGACAGGCCACCAAACATCAGCTTAG
Protein Sequence
- >Bra008446
MATSLDSRKILFDGNDIRDSLPSLNSPGYFLKPSMNELVQREIESPGFCSRVPDFTIGRIGYGFIKFLGSTDVRNLDLDQIVKFQRHEVVVYDDESSKPAFGEGLNKPAEVTLIVNIARGEERAGYVSYKLKQITERQGATFISFVREMGFWKFLVPHFSRFGLSDDEAEDITMDDAPRLENHVALNGDMVVADVDKMETSESELSHSLPAHLGLDPGKMKEMRMLMFPNEVLDEKTFSKRYSSRYSTGCAENALALLEYNPGNDKSSPGSILMVQQNKNLAVRKSKMGGFELDISHETPLTDNYSRNVVDAALFMGRSFRAGWGPNGVLLHTGNPIGSSSSQRVLSSVISVDKIAVDKVVRDKKEKVQKELIDSAFETPLSLHKELYHEEEKEVRFGSFSLKLQKVVTDRVILSDICRNYIDIIEKQLEFPGLSNSAKLFLTHQVMVWELIKVLFSERQSTYAASDNDEDMMQDVKEESAEVNAEALPLIRRAEFSCWLQECVSHRVQEDVSDLIGSGYLKHLFFLLTGRELDSAVELAISKGDVRLACLLSQVGGSTVNRDDIMQQLHLWGRNGLDFNYIEKDRIKLYELLAGNIHDALQDFAIDWKRFLGLLMWHHLAPDSSLPVIFRNYQLLLDQGKAPWPVPIYIDEGPADGIVSNTKHSDMLYYLMLLHSREEGKIGFLKTMFSAFSSTDDPLDYHMIWHQRGILEAVGAFTSDDLHALDMGFVAQLLSQGLCHWAIYVVLHMPYRKDRPYLHFTVIREILFQFCETWSSVESQRQFIKDLGIPSVWMHEALAVYYNYHGDFVKALDHFIECANWQRAHSIFMTSVAHSLFLSANHSEIWRIATSMDDRKSEIENWDLGAGIYMSFYLLKSSLEEDADTMLELDSPESRNESCRSFVGRLNESLAVWGDRLPVEARVAYTKMAEEICELLLSGLSVYPDRDSQLSCFMTAFKAPLPEDVRSSHLQDAVSLFSLYLSETGHQTSA