Information report for Bra005541
Gene Details
Functional Annotation
- Represses photomorphogenesis and induces skotomorphogenesis in the dark. Contains a ring finger zinc-binding motif, a coiled-coil domain, and several WD-40 repeats, similar to G-beta proteins. The C-terminus has homology to TAFII80, a subunit of the TFIID component of the RNA polymerase II of Drosophila. Nuclear localization in the dark and cytoplasmic in the light.
Homologous
- Arabidopsis thaliana: AT2G32950
- Brassica napus: BnaA05G0112800ZS, BnaC04G0141600ZS
- Brassica oleracea: Bo4g045420
- Glycine max: GmCOP1b, Glyma.14G049700
- Gossypium hirsutum: Gohir.D11G159400, Gohir.A11G152500
- Juglans regia: Jr01_18280
- Manihot esculenta: MANES_12G068900
- Medicago truncatula: Medtr5g085250
- Populus trichocarpa: POPTR_014G159300v3
- Prunus avium: Pav_sc0000108.1_g880.1.mk
- Solanum lycopersicum: Solyc12g005950.2
Sequences
gDNA Sequence
- >Bra005541
CAAGCAGCGAGTACCAGAACTTTGATGGTTCCTTGGCTATTCGCAGTCAGCATCGTGGGACTATCGCTCTTCCAGCAAACCGCACTAATAAAGTATGAACCCGCCTCTTCCTCTGCTTCCTCCATGTCTAGTGATCCAAACCTATGCGATGTCACAGGTTTCGTGATCTCCTACAATCCCACATCCACCAAATACTTGAGCAACGAGAGATTCAACATGTATAAATGATAAATGGAGGCAGAGGTTTGAGATTTTGTGAAACCTTGTGATATACATATACTTCATTTGTCTCGCTTCCGCAGGCGAGATACTCGCTGTTCACTGTTAGACCCACAAAGTTCTTCTCATTAGTGTGTCCTCTAAATGTCCGAACCTGAAAATTAAAAAAACGCATAAATTAATATTGAACAACATAGCCAAGACTTGTTTCTTTGTATACAATCCGGGAAGTAATCTTACTGGCAAGTTGTCCTTGACATCCCATAAGCGTAGTGTGCTATCAGTAGACGCAGACGCAAGCTCGTTGTTGGACAAAAACTTCACATAGGAGACCGCTTTCTTGTGTCCACTGAAGACATGAAGTGGTTGGCTTATGTTTCTTAAATCGTAGTAATGGATGTGATGATCAGCTGATCCGACCTGCAATAAGTCAAAAGGCTTAAAGATTATATCTGAAGAGGTGTGGCAGTGTGAAGATGATCATGATCGGATAGATCAAACATGAATGTGATGAAAATATATACCGCAATGAAGTTGCTTGAGCCAGGATTGTACTTGACACAACAAATGTTTGCTTTCATATCAATGTTAAGCACACTTGCTTCCTGCCTTGTGCACCAAACTTTAACCTGGTTCAAACACATATCACAATAGTTTTTTTTTTTTTTTTTTGAACACCACACATATCACAATAGTTTAATTAACTAATGTGACCTTCATACTCCAGATACATTGCACGGTTTCAACATACCTTACAATCGTCACTACCAGACACAAGCATAGATGGTTCTGTTCGCGAAAAGTCAACGCTCCAGGCACGTTTTTCGTGCTCTTCATACTCCATAAGACTCTGTCACCAGTTGTTTAATTAAAAATTTAGATACATTGCACAGTATCTTAAAGGTGCGATGCTGGAGTAGTAGGGCAAAGTAATCACCTGTCTAGTGGTTACATCCCACACAGTTACTATTCCTTCATAATCACTGCTTGCTATATGGTTTTTCTCATGCTTATTCCAACTCAAACAACTAAGTTTGGAGCGAGTTGACATCTCCACAATCGGACACTGTATATCTGCCGGTTCATTGACAACCTGAAAAGTATGCACAACCATCTTCAACTAACCCACCAGAGTCCATTATATAAAATACTAAAACTAACAATTTGGTAATTTAGAAGCTTGGACATAATTGTTCTATGAAATACTAAGAAAATAAAGGCCAAATGGCTATCATGCATCACAACTAGACTTTCTTCAACAAATGCTACATCTTAGTTTCCTTGTCAAGTATTCCCCAATTGAGATGCACGACATTTCACAAGAGCATAACTCTGGCAAAGATGATTCAATTGGTATGTAAATGAATGCTCTCTAAGATTTTTTTGAACTTACCGAAGAGAAGTCAAAAACCTTTATACATCTAGAAACACCAGCAGTGGCGAAGAGCTCATCATCACGATCAAACTCTATGCTGAAAAGGAACAAGACCCTCTCTTTCAGTAATCTCAACAAGATAACGAACAAGGAGAAAGAACTCACCTTGATACAATGTTGGCTGAATGAAATATATCCCCATGCCGGATCTCCGCTATAACTCTCAGACGACTGTACATAAAGAGTATAATCAAAATTCAGATGGTCTAAAACATCTCTAATGCACGAGTGCAACTAATTAGAAAAGGGACATTCACTAATCAAACCTGTAGCGAGTAAAGGTAGTGAGCACAGATTGAAAATCTGCAAGGCCGTGGCTGTATCCTTCCCTACGTACTACACTATTATCACTTTCTTGATTAGTATGTGGTTGGTCTACCAACTGACGCCGCTTTTGGAGGTAACACTCTTGTAGATCGTTGAACTACAAGAAAAGACACTCAAAACGAAATTAGCCAATCAACAAGACATTTTCAAGATGACGAGCAGACAAGAAAGAACAAACCTGAGCATGGATCCGTTTCTTCCTGGCCATTGAGACAGATGACTGATTCAAACTCTGGGAATCTGATCCACTCTGTGCATCCTTTTTCGATATCCCGTGAGAGCTTCCTTGTGCCTTTCCCTCTACTACCTTTTTGTTTTGAAAATTGCCTGATGGATTCCCTCCTCTTATGCTCAGAGAATTGGAGTTGAAGCCGGTGTGACTCTTCTCGAGGGGCCATGCATTTCGTGTGCTTGGATCATCTCCGAGCATTCGTAACTTCACAGAGTACCTATCCCGAGCACGGTACAAATCTATTCTATGTCTCTCAACTGCATTTATGTCTTCTTTAATATACTGAAGATCAGTTTGCACCTACAACAACAACGGGAGAACTTCTTTGAATCAAAAATAACAAGTTTGAAGCGCAACAGGAATAGCTATTAATAGGCAAACCAGATGCTACTCCAGAATCCAAGACAAAACCAACCTCATTAAGTTCATCAACTTTCTGCTTCCTCAGACAATGCAAAAAGTCCAAGAGTATCTGCATGTTCCTCTCAGCTTCTTCCTGTTCCATTTTCCTCTTCTTTTCCGCAAGAAGTGTCAGCAGATTATCAACCTCTTTAATTGACACATCACAACCCTGTCTAAGGAAGAAAGCAAAAAGTAAAAATTTGATTTAAAAAAATAAAAAGACTTTCAGACAGAGAATTGGTTCTACTCCAAATAATTAATCTGACAAAACCAACGTAAAGAGGAGTAGTAGAACACAAAGGCTTGTCAGGAAACCGACCCGTTGTAATGCGTCCCGAAACTGATCCAAAGGCGATGCAGTTTTCGACACATGCCGAGCTGAAGTTTTCTTCAACAGCTACACAGATAGTAAAAAAAAAAACAAGTCATATAATAAGCCTCCATTTCAGACAACAGTTTCTCTAACCAAGTTTTCTATTACAAGTTCAGCAAAACAACACTTGTATGAGTGAGTGTGAGCAAGATAAGAAAGAGAGACCTTATCAAGTAAGAAGTTAGGGTAAAGCTGATTATTTGTGAGGTGCTGGCTACAACAGGGACAATCGCTCTTGTTCCTAAGGTGCGTGATGATGCACATGTAGCAGAAGCTATGTCCACACGCCGTGAGGAAAGCGTCCTTTATAACCTGCATACAAATCGGACAGAGCAAGTCCTTATCCAGATCCGGAGCTCCAATCTCCAAACCACCGCTTCCTCCTTCGTCGTTTTCGTGGCGGTGGTTGGGGCCTTCTCCGATGGAGGAGGCTCTCGGATCGGGTTTCACAGCCGGAACTAGCGGATCCTTCCTAATCTCTTCCAT
CDS Sequence
- >Bra005541
ATGGAAGAGATTAGGAAGGATCCGCTAGTTCCGGCTGTGAAACCCGATCCGAGAGCCTCCTCCATCGGAGAAGGCCCCAACCACCGCCACGAAAACGACGAAGGAGGAAGCGGTGGTTTGGAGATTGGAGCTCCGGATCTGGATAAGGACTTGCTCTGTCCGATTTGTATGCAGGTTATAAAGGACGCTTTCCTCACGGCGTGTGGACATAGCTTCTGCTACATGTGCATCATCACGCACCTTAGGAACAAGAGCGATTGTCCCTGTTGTAGCCAGCACCTCACAAATAATCAGCTTTACCCTAACTTCTTACTTGATAAGCTGTTGAAGAAAACTTCAGCTCGGCATGTGTCGAAAACTGCATCGCCTTTGGATCAGTTTCGGGACGCATTACAACGGGGTTGTGATGTGTCAATTAAAGAGGTTGATAATCTGCTGACACTTCTTGCGGAAAAGAAGAGGAAAATGGAACAGGAAGAAGCTGAGAGGAACATGCAGATACTCTTGGACTTTTTGCATTGTCTGAGGAAGCAGAAAGTTGATGAACTTAATGAGGTGCAAACTGATCTTCAGTATATTAAAGAAGACATAAATGCAGTTGAGAGACATAGAATAGATTTGTACCGTGCTCGGGATAGGTACTCTGTGAAGTTACGAATGCTCGGAGATGATCCAAGCACACGAAATGCATGGCCCCTCGAGAAGAGTCACACCGGCTTCAACTCCAATTCTCTGAGCATAAGAGGAGGGAATCCATCAGGCAATTTTCAAAACAAAAAGGTAGTAGAGGGAAAGGCACAAGGAAGCTCTCACGGGATATCGAAAAAGGATGCACAGAGTGGATCAGATTCCCAGAGTTTGAATCAGTCATCTGTCTCAATGGCCAGGAAGAAACGGATCCATGCTCAGTTCAACGATCTACAAGAGTGTTACCTCCAAAAGCGGCGTCAGTTGGTAGACCAACCACATACTAATCAAGAAAGTGATAATAGTGTAGTACGTAGGGAAGGATACAGCCACGGCCTTGCAGATTTTCAATCTGTGCTCACTACCTTTACTCGCTACAGTCGTCTGAGAGTTATAGCGGAGATCCGGCATGGGGATATATTTCATTCAGCCAACATTGTATCAAGCATAGAGTTTGATCGTGATGATGAGCTCTTCGCCACTGCTGGTGTTTCTAGATGTATAAAGGTTTTTGACTTCTCTTCGGTTGTCAATGAACCGGCAGATATACAGTGTCCGATTGTGGAGATGTCAACTCGCTCCAAACTTAGTTGTTTGAGTTGGAATAAGCATGAGAAAAACCATATAGCAAGCAGTGATTATGAAGGAATAGTAACTGTGTGGGATGTAACCACTAGACAGAGTCTTATGGAGTATGAAGAGCACGAAAAACGTGCCTGGAGCGTTGACTTTTCGCGAACAGAACCATCTATGCTTGTGTCTGGTAGTGACGATTGTAAGGAAGCAAGTGTGCTTAACATTGATATGAAAGCAAACATTTGTTGTGTCAAGTACAATCCTGGCTCAAGCAACTTCATTGCGGTCGGATCAGCTGATCATCACATCCATTACTACGATTTAAGAAACATAAGCCAACCACTTCATGTCTTCAGTGGACACAAGAAAGCGGTCTCCTATGTGAAGTTTTTGTCCAACAACGAGCTTGCGTCTGCGTCTACTGATAGCACACTACGCTTATGGGATGTCAAGGACAACTTGCCAGTTCGGACATTTAGAGGACACACTAATGAGAAGAACTTTGTGGGTCTAACAGTGAACAGCGAGTATCTCGCCTGCGGAAGCGAGACAAATGAAGTATATGTATATCACAAGGAGATCACGAAACCTGTGACATCGCATAGGTTTGGATCACTAGACATGGAGGAAGCAGAGGAAGAGGCGGGTTCATACTTTATTAGTGCGGTTTGCTGGAAGAGCGATAGTCCCACGATGCTGACTGCGAATAGCCAAGGAACCATCAAAGTTCTGGTACTCGCTGCTTGA
Protein Sequence
- >Bra005541
MEEIRKDPLVPAVKPDPRASSIGEGPNHRHENDEGGSGGLEIGAPDLDKDLLCPICMQVIKDAFLTACGHSFCYMCIITHLRNKSDCPCCSQHLTNNQLYPNFLLDKLLKKTSARHVSKTASPLDQFRDALQRGCDVSIKEVDNLLTLLAEKKRKMEQEEAERNMQILLDFLHCLRKQKVDELNEVQTDLQYIKEDINAVERHRIDLYRARDRYSVKLRMLGDDPSTRNAWPLEKSHTGFNSNSLSIRGGNPSGNFQNKKVVEGKAQGSSHGISKKDAQSGSDSQSLNQSSVSMARKKRIHAQFNDLQECYLQKRRQLVDQPHTNQESDNSVVRREGYSHGLADFQSVLTTFTRYSRLRVIAEIRHGDIFHSANIVSSIEFDRDDELFATAGVSRCIKVFDFSSVVNEPADIQCPIVEMSTRSKLSCLSWNKHEKNHIASSDYEGIVTVWDVTTRQSLMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKEASVLNIDMKANICCVKYNPGSSNFIAVGSADHHIHYYDLRNISQPLHVFSGHKKAVSYVKFLSNNELASASTDSTLRLWDVKDNLPVRTFRGHTNEKNFVGLTVNSEYLACGSETNEVYVYHKEITKPVTSHRFGSLDMEEAEEEAGSYFISAVCWKSDSPTMLTANSQGTIKVLVLAA